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Biol. Unit 2
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Asym.Unit (386 KB)
Biol.Unit 1 (192 KB)
Biol.Unit 2 (192 KB)
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(1)
Title
:
VARYING BINDING MODES OF INHIBITORS AND STRUCTURAL DIFFERENCES IN THE BINDING POCKETS OF DIFFERENT GAMMA-GLUTAMYLTRANSPEPTIDASES
Authors
:
C. Bolz, N. C. Bach, H. Meyer, G. Mueller, M. Dawidowski, G. Popowicz, S. A. Skerra, M. Gerhard
Date
:
28 May 15 (Deposition) - 18 May 16 (Release) - 18 May 16 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.49
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,C (1x)
Biol. Unit 2: B,D (1x)
Keywords
:
Gamma-Glutamyltranspeptidase, Ntn-Hydrolase, Acivicin, Proteros Biostructures Gmbh, Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
C. Bolz, N. C. Bach, H. Meyer, G. Mueller, M. Dawidowski, G. Popowicz, S. A. Sieber, A. Skerra, M. Gerhard
Varying Binding Modes Of Inhibitors And Structural Differences In The Binding Pockets Of Different Gamma-Glutamyltranspeptidases
To Be Published
[
close entry info
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Hetero Components
(2, 24)
Info
All Hetero Components
1a: (2S)-AMINO[(5S)-4,5-DIHYDRO-1,2-OX... (4UDa)
1b: (2S)-AMINO[(5S)-4,5-DIHYDRO-1,2-OX... (4UDb)
2a: 1,2-ETHANEDIOL (EDOa)
2aa: 1,2-ETHANEDIOL (EDOaa)
2ab: 1,2-ETHANEDIOL (EDOab)
2ac: 1,2-ETHANEDIOL (EDOac)
2ad: 1,2-ETHANEDIOL (EDOad)
2ae: 1,2-ETHANEDIOL (EDOae)
2af: 1,2-ETHANEDIOL (EDOaf)
2ag: 1,2-ETHANEDIOL (EDOag)
2ah: 1,2-ETHANEDIOL (EDOah)
2ai: 1,2-ETHANEDIOL (EDOai)
2aj: 1,2-ETHANEDIOL (EDOaj)
2ak: 1,2-ETHANEDIOL (EDOak)
2al: 1,2-ETHANEDIOL (EDOal)
2am: 1,2-ETHANEDIOL (EDOam)
2an: 1,2-ETHANEDIOL (EDOan)
2ao: 1,2-ETHANEDIOL (EDOao)
2ap: 1,2-ETHANEDIOL (EDOap)
2aq: 1,2-ETHANEDIOL (EDOaq)
2b: 1,2-ETHANEDIOL (EDOb)
2c: 1,2-ETHANEDIOL (EDOc)
2d: 1,2-ETHANEDIOL (EDOd)
2e: 1,2-ETHANEDIOL (EDOe)
2f: 1,2-ETHANEDIOL (EDOf)
2g: 1,2-ETHANEDIOL (EDOg)
2h: 1,2-ETHANEDIOL (EDOh)
2i: 1,2-ETHANEDIOL (EDOi)
2j: 1,2-ETHANEDIOL (EDOj)
2k: 1,2-ETHANEDIOL (EDOk)
2l: 1,2-ETHANEDIOL (EDOl)
2m: 1,2-ETHANEDIOL (EDOm)
2n: 1,2-ETHANEDIOL (EDOn)
2o: 1,2-ETHANEDIOL (EDOo)
2p: 1,2-ETHANEDIOL (EDOp)
2q: 1,2-ETHANEDIOL (EDOq)
2r: 1,2-ETHANEDIOL (EDOr)
2s: 1,2-ETHANEDIOL (EDOs)
2t: 1,2-ETHANEDIOL (EDOt)
2u: 1,2-ETHANEDIOL (EDOu)
2v: 1,2-ETHANEDIOL (EDOv)
2w: 1,2-ETHANEDIOL (EDOw)
2x: 1,2-ETHANEDIOL (EDOx)
2y: 1,2-ETHANEDIOL (EDOy)
2z: 1,2-ETHANEDIOL (EDOz)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
4UD
1
Ligand/Ion
(2S)-AMINO[(5S)-4,5-DIHYDRO-1,2-OXAZOL-5-YL]ACETIC ACID
2
EDO
23
Ligand/Ion
1,2-ETHANEDIOL
[
close Hetero Component info
]
Sites
(29, 29)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC4 (SOFTWARE)
03: AD1 (SOFTWARE)
04: AD6 (SOFTWARE)
05: AE2 (SOFTWARE)
06: AE4 (SOFTWARE)
07: AE5 (SOFTWARE)
08: AE6 (SOFTWARE)
09: AE7 (SOFTWARE)
10: AE8 (SOFTWARE)
11: AE9 (SOFTWARE)
12: AF1 (SOFTWARE)
13: AF2 (SOFTWARE)
14: AF3 (SOFTWARE)
15: AF4 (SOFTWARE)
16: AF5 (SOFTWARE)
17: AF6 (SOFTWARE)
18: AF7 (SOFTWARE)
19: AF8 (SOFTWARE)
20: AF9 (SOFTWARE)
21: AG1 (SOFTWARE)
22: AG2 (SOFTWARE)
23: AG3 (SOFTWARE)
24: AG4 (SOFTWARE)
25: AG5 (SOFTWARE)
26: AG6 (SOFTWARE)
27: AG7 (SOFTWARE)
28: AG8 (SOFTWARE)
29: AG9 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
TYR A:29 , HOH D:815
binding site for residue EDO A 401
02
AC4
SOFTWARE
SER A:28 , TYR A:29 , SER B:28 , TYR B:29 , SER C:499 , HOH C:802 , SER D:499 , HOH D:801
binding site for residue EDO A 404
03
AD1
SOFTWARE
ASN A:260 , HOH A:621 , LYS B:253 , ALA B:257
binding site for residue EDO A 410
04
AD6
SOFTWARE
PRO A:30 , TYR B:29 , SER C:495 , SER C:560 , THR C:561 , HOH C:802 , HOH C:837
binding site for residue EDO C 705
05
AE2
SOFTWARE
ASP C:522 , ASP C:525 , ASN C:526 , HOH C:817 , HOH C:841 , ASN D:526
binding site for residue EDO C 710
06
AE4
SOFTWARE
GLU B:167 , LYS B:214 , HOH B:565
binding site for residue EDO B 401
07
AE5
SOFTWARE
THR B:152 , GLY B:201 , HIS B:202 , HOH B:574 , HOH B:711 , TRP D:389
binding site for residue EDO B 402
08
AE6
SOFTWARE
LYS B:194 , HIS B:202 , HOH B:711 , TRP D:389 , ASN D:391 , HOH D:879
binding site for residue EDO B 403
09
AE7
SOFTWARE
SER B:42 , SER B:43 , HIS B:44 , PRO B:45 , SER B:48 , LYS D:565
binding site for residue EDO B 405
10
AE8
SOFTWARE
ASN B:94 , LEU B:188 , LYS B:189 , SER B:191 , LYS B:194 , HOH B:778
binding site for residue EDO B 406
11
AE9
SOFTWARE
LYS B:199 , ASP B:204 , GLN B:206 , EDO B:412
binding site for residue EDO B 407
12
AF1
SOFTWARE
PHE B:353 , ILE B:356 , GLN B:357 , PRO B:358 , HOH B:616
binding site for residue EDO B 408
13
AF2
SOFTWARE
LYS B:262 , ASP B:334 , GLU C:444 , HOH C:944
binding site for residue EDO B 409
14
AF3
SOFTWARE
LYS B:109 , GLU B:241 , LYS B:245 , HOH B:682
binding site for residue EDO B 410
15
AF4
SOFTWARE
LYS B:33 , ASN B:34 , GLN B:52 , HOH B:519
binding site for residue EDO B 411
16
AF5
SOFTWARE
LEU B:203 , ASP B:204 , EDO B:407 , ARG D:388
binding site for residue EDO B 412
17
AF6
SOFTWARE
LEU B:180 , ARG B:184 , PHE B:197 , PHE B:198 , ASP B:204 , TYR B:205
binding site for residue EDO B 413
18
AF7
SOFTWARE
ALA A:27 , HOH A:597 , ALA B:27 , SER C:499 , SER D:499 , HOH D:806 , HOH D:854 , HOH D:864
binding site for residue EDO D 702
19
AF8
SOFTWARE
ASP D:510 , GLU D:511 , GLN D:533
binding site for residue EDO D 703
20
AF9
SOFTWARE
LEU A:304 , ALA D:521 , ASP D:525 , HOH D:880 , HOH D:917
binding site for residue EDO D 704
21
AG1
SOFTWARE
PRO D:501 , ARG D:502 , PHE D:503 , ILE D:514 , GLU D:515 , GLY D:518 , HOH D:814 , HOH D:856
binding site for residue EDO D 705
22
AG2
SOFTWARE
TYR A:29 , PRO B:30 , ILE B:32 , SER D:495 , SER D:560 , THR D:561 , HOH D:801 , HOH D:815
binding site for residue EDO D 706
23
AG3
SOFTWARE
ASN B:311 , SER D:485 , TYR D:490 , HOH D:807 , HOH D:846
binding site for residue EDO D 707
24
AG4
SOFTWARE
ARG B:326 , ASP D:422 , PHE D:423 , ASN D:429 , ASN D:431 , LEU D:435 , ASN D:441 , HOH D:850 , HOH D:862 , HOH D:911
binding site for residue EDO D 708
25
AG5
SOFTWARE
ASP D:387 , ARG D:388 , TRP D:389 , GLY D:390 , SER D:555 , PHE D:557 , HOH D:852 , HOH D:873 , HOH D:897
binding site for residue EDO D 709
26
AG6
SOFTWARE
ASN C:526 , HOH C:841 , ASP D:522 , ASP D:525 , HOH D:818
binding site for residue EDO D 710
27
AG7
SOFTWARE
ARG D:475 , ARG D:513
binding site for residue EDO D 711
28
AG8
SOFTWARE
ALA B:79 , ARG B:103 , THR D:381 , TYR D:397 , THR D:398 , ASN D:400 , GLU D:419 , ASP D:422 , TYR D:433 , SER D:451 , SER D:452 , MET D:453 , PRO D:471 , GLY D:472 , GLY D:473 , ILE D:476 , HOH D:855 , HOH D:857 , HOH D:860 , HOH D:914
binding site for Di-peptide 4UD D 701 and THR D 380
29
AG9
SOFTWARE
ALA B:79 , ARG B:103 , THR D:381 , TYR D:397 , THR D:398 , ASN D:400 , GLU D:419 , ASP D:422 , TYR D:433 , SER D:451 , SER D:452 , MET D:453 , PRO D:471 , GLY D:472 , GLY D:473 , ILE D:476 , HOH D:855 , HOH D:857 , HOH D:860 , HOH D:914
binding site for Di-peptide 4UD D 701 and THR D 380
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