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5AMA
Biol. Unit 3
Info
Asym.Unit (871 KB)
Biol.Unit 1 (220 KB)
Biol.Unit 2 (220 KB)
Biol.Unit 3 (220 KB)
Biol.Unit 4 (221 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE ANGIOTENSIN-1 CONVERTING ENZYME N-DOMAIN IN COMPLEX WITH AMYLOID-BETA 1-16
Authors
:
G. Masuyer, K. M. Larmuth, R. G. Douglas, E. D. Sturrock, K. R. Acharya
Date
:
10 Mar 15 (Deposition) - 13 Jan 16 (Release) - 06 Apr 16 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.80
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: D (1x)
Biol. Unit 2: C (1x)
Biol. Unit 3: A (1x)
Biol. Unit 4: B (1x)
Keywords
:
Metalloprotease, Amyloid- Beta, Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
K. M. Larmuth, G. Masuyer, R. G. Douglas, E. D. Sturrock, K. R. Acharya
The Kinetic And Structural Characterisation Of Amyloid-Beta Metabolism By Human Angiotensin-1- Converting Enzyme (Ace)
Febs J. V. 283 1060 2016
[
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Hetero Components
(5, 11)
Info
All Hetero Components
1a: ASPARTIC ACID (ASPa)
1b: ASPARTIC ACID (ASPb)
1c: ASPARTIC ACID (ASPc)
1d: ASPARTIC ACID (ASPd)
2a: BETA-D-MANNOSE (BMAa)
2b: BETA-D-MANNOSE (BMAb)
3a: CHLORIDE ION (CLa)
3b: CHLORIDE ION (CLb)
3c: CHLORIDE ION (CLc)
3d: CHLORIDE ION (CLd)
4a: ALPHA-L-FUCOSE (FUCa)
4b: ALPHA-L-FUCOSE (FUCb)
4c: ALPHA-L-FUCOSE (FUCc)
4d: ALPHA-L-FUCOSE (FUCd)
5a: BETA-L-FUCOSE (FULa)
6a: ALPHA-D-MANNOSE (MANa)
7a: N-ACETYL-D-GLUCOSAMINE (NAGa)
7b: N-ACETYL-D-GLUCOSAMINE (NAGb)
7c: N-ACETYL-D-GLUCOSAMINE (NAGc)
7d: N-ACETYL-D-GLUCOSAMINE (NAGd)
7e: N-ACETYL-D-GLUCOSAMINE (NAGe)
7f: N-ACETYL-D-GLUCOSAMINE (NAGf)
7g: N-ACETYL-D-GLUCOSAMINE (NAGg)
7h: N-ACETYL-D-GLUCOSAMINE (NAGh)
7i: N-ACETYL-D-GLUCOSAMINE (NAGi)
7j: N-ACETYL-D-GLUCOSAMINE (NAGj)
7k: N-ACETYL-D-GLUCOSAMINE (NAGk)
7l: N-ACETYL-D-GLUCOSAMINE (NAGl)
7m: N-ACETYL-D-GLUCOSAMINE (NAGm)
7n: N-ACETYL-D-GLUCOSAMINE (NAGn)
7o: N-ACETYL-D-GLUCOSAMINE (NAGo)
7p: N-ACETYL-D-GLUCOSAMINE (NAGp)
7q: N-ACETYL-D-GLUCOSAMINE (NAGq)
7r: N-ACETYL-D-GLUCOSAMINE (NAGr)
7s: N-ACETYL-D-GLUCOSAMINE (NAGs)
8a: HEXAETHYLENE GLYCOL (P6Ga)
8b: HEXAETHYLENE GLYCOL (P6Gb)
8c: HEXAETHYLENE GLYCOL (P6Gc)
8d: HEXAETHYLENE GLYCOL (P6Gd)
8e: HEXAETHYLENE GLYCOL (P6Ge)
8f: HEXAETHYLENE GLYCOL (P6Gf)
9a: DI(HYDROXYETHYL)ETHER (PEGa)
9b: DI(HYDROXYETHYL)ETHER (PEGb)
9c: DI(HYDROXYETHYL)ETHER (PEGc)
9d: DI(HYDROXYETHYL)ETHER (PEGd)
9e: DI(HYDROXYETHYL)ETHER (PEGe)
9f: DI(HYDROXYETHYL)ETHER (PEGf)
9g: DI(HYDROXYETHYL)ETHER (PEGg)
9h: DI(HYDROXYETHYL)ETHER (PEGh)
9i: DI(HYDROXYETHYL)ETHER (PEGi)
9j: DI(HYDROXYETHYL)ETHER (PEGj)
9k: DI(HYDROXYETHYL)ETHER (PEGk)
10a: SERINE (SERa)
10b: SERINE (SERb)
10c: SERINE (SERc)
10d: SERINE (SERd)
11a: ZINC ION (ZNa)
11b: ZINC ION (ZNb)
11c: ZINC ION (ZNc)
11d: ZINC ION (ZNd)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ASP
1
Mod. Amino Acid
ASPARTIC ACID
2
BMA
-1
Ligand/Ion
BETA-D-MANNOSE
3
CL
-1
Ligand/Ion
CHLORIDE ION
4
FUC
-1
Ligand/Ion
ALPHA-L-FUCOSE
5
FUL
-1
Ligand/Ion
BETA-L-FUCOSE
6
MAN
-1
Ligand/Ion
ALPHA-D-MANNOSE
7
NAG
5
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
8
P6G
1
Ligand/Ion
HEXAETHYLENE GLYCOL
9
PEG
3
Ligand/Ion
DI(HYDROXYETHYL)ETHER
10
SER
1
Mod. Amino Acid
SERINE
11
ZN
-1
Ligand/Ion
ZINC ION
[
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Sites
(12, 12)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: BC8 (SOFTWARE)
08: CC8 (SOFTWARE)
09: CC9 (SOFTWARE)
10: DC1 (SOFTWARE)
11: DC7 (SOFTWARE)
12: EC2 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
HIS A:361 , HIS A:365 , GLU A:389 , HOH A:2319 , HOH A:2320
BINDING SITE FOR RESIDUE ZN A1001
02
AC2
SOFTWARE
TYR A:202 , PRO A:497 , ARG A:500
BINDING SITE FOR RESIDUE CL A1002
03
AC3
SOFTWARE
TRP A:80 , ASP A:189 , GLY A:190 , PHE A:191
BINDING SITE FOR RESIDUE PEG A1200
04
AC4
SOFTWARE
P6G A:1202
BINDING SITE FOR RESIDUE PEG A1201
05
AC5
SOFTWARE
GLN A:286 , TRP A:288 , HIS A:292 , ARG A:295 , PEG A:1201 , HOH A:2270 , GLN C:286 , TRP C:288 , HIS C:292 , ILE C:408
BINDING SITE FOR RESIDUE P6G A1202
06
AC6
SOFTWARE
ALA A:334 , HIS A:365 , TYR A:369 , HIS A:388 , HOH A:2143 , HOH A:2299 , HOH A:2424
BINDING SITE FOR RESIDUE PEG A1204
07
BC8
SOFTWARE
ARG A:453 , TYR A:465 , TYR C:465
BINDING SITE FOR RESIDUE PEG C1201
08
CC8
SOFTWARE
ASN A:45 , THR A:47 , GLU A:49 , ASN A:50 , ARG A:326 , HOH A:2421
BINDING SITE FOR POLY-SACCHARIDE RESIDUES NAG A1101 THROUGH NAG A1102 BOUND TO ASN A 45
09
CC9
SOFTWARE
ASN A:416 , GLY A:523 , PRO A:524 , GLN A:527 , HOH A:2423
BINDING SITE FOR POLY-SACCHARIDE RESIDUES NAG A1103 THROUGH NAG A1104 BOUND TO ASN A 416
10
DC1
SOFTWARE
ASN A:480 , THR A:482 , HIS A:483 , ARG C:245 , GLU C:596
BINDING SITE FOR MONO-SACCHARIDE NAG A1100 BOUND TO ASN A 480
11
DC7
SOFTWARE
ARG A:245 , GLU A:596 , ASN C:480 , THR C:482 , HOH C:2436
BINDING SITE FOR POLY-SACCHARIDE RESIDUES NAG C1100 THROUGH FUC C1101 BOUND TO ASN C 480
12
EC2
SOFTWARE
GLN A:259 , HIS A:331 , ALA A:332 , THR A:358 , GLU A:362 , LYS A:489 , HIS A:491 , TYR A:498 , TYR A:501 , HOH A:2247 , HOH A:2248 , HOH A:2298 , HOH A:2319 , HOH A:2320 , HOH A:3001
BINDING SITE FOR DI-PEPTIDE ASP A 907 AND SER A 908
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
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PROSITE Patterns/Profiles
(, 0)
Info
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Exons
(0, 0)
Info
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(0, 0)
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CATH Domains
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all CATH domains
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Sorry, no Info available
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Pfam Domains
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Info
all PFAM domains
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Sorry, no Info available
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Atom Selection
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Protein
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All Atoms
Protein & NOT Variant
Protein & NOT Site
Protein & NOT PROSITE
Chain A
Asymmetric Unit 1
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select :A, :C
select chains 'A' and 'C'
select [ALA]:A
select all 'ALA' residues (Alanines) in chain 'A'
select 5-10
select residue range 5 to 10 in all chains
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select residue range 5 to 10 in chain 'A'
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select non-helix/non-sheet protein parts
set fontsize 20
set label size to 20 (allowed range: 1-58)
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show SS bonds with a radius of 100 units (=0.4Å)
wireframe 100
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Show PDB file:
Asym.Unit (871 KB)
Header - Asym.Unit
Biol.Unit 1 (220 KB)
Header - Biol.Unit 1
Biol.Unit 2 (220 KB)
Header - Biol.Unit 2
Biol.Unit 3 (220 KB)
Header - Biol.Unit 3
Biol.Unit 4 (221 KB)
Header - Biol.Unit 4
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