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5AII
Asym. Unit
Info
Asym.Unit (395 KB)
Biol.Unit 1 (55 KB)
Biol.Unit 2 (53 KB)
Biol.Unit 3 (53 KB)
Biol.Unit 4 (56 KB)
Biol.Unit 5 (54 KB)
Biol.Unit 6 (56 KB)
Biol.Unit 7 (56 KB)
Biol.Unit 8 (55 KB)
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Title
:
DISCOVERY AND CHARACTERIZATION OF THERMOPHILIC LIMONENE-1,2-EPOXIDE HYDROLASES FROM HOT SPRING METAGENOMIC LIBRARIES. CH55-SAMPLE-PEG COMPLEX
Authors
:
E. Ferrandi, C. Sayer, M. N. Isupov, C. Annovazzi, C. Marchesi, G. Iacob X. Peng, E. Bonch-Osmolovskaya, R. Wohlgemuth, J. A. Littlechild, D.
Date
:
13 Feb 15 (Deposition) - 17 Jun 15 (Release) - 12 Aug 15 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.47
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P
Biol. Unit 1: G,H (1x)
Biol. Unit 2: E,F (1x)
Biol. Unit 3: K,L (1x)
Biol. Unit 4: A,B (1x)
Biol. Unit 5: O,P (1x)
Biol. Unit 6: C,D (1x)
Biol. Unit 7: M,N (1x)
Biol. Unit 8: I,J (1x)
Keywords
:
Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
E. E. Ferrandi, C. Sayer, M. N. Isupov, C. Annovazzi, C. Marchesi, G. Iacobone, X. Peng, E. Bonch-Osmolovskaya, R. Wohlgemuth, J. A. Littlechild, D. Montia
Discovery And Characterization Of Thermophilic Limonene- 1, 2-Epoxide Hydrolases From Hot Spring Metagenomic Libraries
Febs J. V. 282 2879 2015
[
close entry info
]
Hetero Components
(8, 80)
Info
All Hetero Components
1a: ACETATE ION (ACTa)
1b: ACETATE ION (ACTb)
1c: ACETATE ION (ACTc)
1d: ACETATE ION (ACTd)
1e: ACETATE ION (ACTe)
1f: ACETATE ION (ACTf)
1g: ACETATE ION (ACTg)
1h: ACETATE ION (ACTh)
1i: ACETATE ION (ACTi)
1j: ACETATE ION (ACTj)
1k: ACETATE ION (ACTk)
2a: 1,2-ETHANEDIOL (EDOa)
2b: 1,2-ETHANEDIOL (EDOb)
2c: 1,2-ETHANEDIOL (EDOc)
2d: 1,2-ETHANEDIOL (EDOd)
2e: 1,2-ETHANEDIOL (EDOe)
2f: 1,2-ETHANEDIOL (EDOf)
2g: 1,2-ETHANEDIOL (EDOg)
2h: 1,2-ETHANEDIOL (EDOh)
2i: 1,2-ETHANEDIOL (EDOi)
2j: 1,2-ETHANEDIOL (EDOj)
2k: 1,2-ETHANEDIOL (EDOk)
2l: 1,2-ETHANEDIOL (EDOl)
2m: 1,2-ETHANEDIOL (EDOm)
2n: 1,2-ETHANEDIOL (EDOn)
2o: 1,2-ETHANEDIOL (EDOo)
2p: 1,2-ETHANEDIOL (EDOp)
2q: 1,2-ETHANEDIOL (EDOq)
2r: 1,2-ETHANEDIOL (EDOr)
2s: 1,2-ETHANEDIOL (EDOs)
3a: HISTIDINE (HISa)
4a: DI(HYDROXYETHYL)ETHER (PEGa)
4b: DI(HYDROXYETHYL)ETHER (PEGb)
4c: DI(HYDROXYETHYL)ETHER (PEGc)
4d: DI(HYDROXYETHYL)ETHER (PEGd)
4e: DI(HYDROXYETHYL)ETHER (PEGe)
4f: DI(HYDROXYETHYL)ETHER (PEGf)
4g: DI(HYDROXYETHYL)ETHER (PEGg)
4h: DI(HYDROXYETHYL)ETHER (PEGh)
4i: DI(HYDROXYETHYL)ETHER (PEGi)
4j: DI(HYDROXYETHYL)ETHER (PEGj)
4k: DI(HYDROXYETHYL)ETHER (PEGk)
4l: DI(HYDROXYETHYL)ETHER (PEGl)
4m: DI(HYDROXYETHYL)ETHER (PEGm)
4n: DI(HYDROXYETHYL)ETHER (PEGn)
4o: DI(HYDROXYETHYL)ETHER (PEGo)
4p: DI(HYDROXYETHYL)ETHER (PEGp)
5a: TETRAETHYLENE GLYCOL (PG4a)
5b: TETRAETHYLENE GLYCOL (PG4b)
5c: TETRAETHYLENE GLYCOL (PG4c)
5d: TETRAETHYLENE GLYCOL (PG4d)
5e: TETRAETHYLENE GLYCOL (PG4e)
5f: TETRAETHYLENE GLYCOL (PG4f)
5g: TETRAETHYLENE GLYCOL (PG4g)
5h: TETRAETHYLENE GLYCOL (PG4h)
5i: TETRAETHYLENE GLYCOL (PG4i)
5j: TETRAETHYLENE GLYCOL (PG4j)
5k: TETRAETHYLENE GLYCOL (PG4k)
5l: TETRAETHYLENE GLYCOL (PG4l)
5m: TETRAETHYLENE GLYCOL (PG4m)
5n: TETRAETHYLENE GLYCOL (PG4n)
5o: TETRAETHYLENE GLYCOL (PG4o)
5p: TETRAETHYLENE GLYCOL (PG4p)
5q: TETRAETHYLENE GLYCOL (PG4q)
5r: TETRAETHYLENE GLYCOL (PG4r)
5s: TETRAETHYLENE GLYCOL (PG4s)
5t: TETRAETHYLENE GLYCOL (PG4t)
5u: TETRAETHYLENE GLYCOL (PG4u)
5v: TETRAETHYLENE GLYCOL (PG4v)
5w: TETRAETHYLENE GLYCOL (PG4w)
5x: TETRAETHYLENE GLYCOL (PG4x)
6a: 1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-... (PG5a)
7a: 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-ME... (PG6a)
7b: 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-ME... (PG6b)
8a: TRIETHYLENE GLYCOL (PGEa)
8b: TRIETHYLENE GLYCOL (PGEb)
8c: TRIETHYLENE GLYCOL (PGEc)
8d: TRIETHYLENE GLYCOL (PGEd)
8e: TRIETHYLENE GLYCOL (PGEe)
8f: TRIETHYLENE GLYCOL (PGEf)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ACT
11
Ligand/Ion
ACETATE ION
2
EDO
19
Ligand/Ion
1,2-ETHANEDIOL
3
HIS
1
Mod. Amino Acid
HISTIDINE
4
PEG
16
Ligand/Ion
DI(HYDROXYETHYL)ETHER
5
PG4
24
Ligand/Ion
TETRAETHYLENE GLYCOL
6
PG5
1
Ligand/Ion
1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE
7
PG6
2
Ligand/Ion
1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE
8
PGE
6
Ligand/Ion
TRIETHYLENE GLYCOL
[
close Hetero Component info
]
Sites
(79, 79)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
26: CC8 (SOFTWARE)
27: CC9 (SOFTWARE)
28: DC1 (SOFTWARE)
29: DC2 (SOFTWARE)
30: DC3 (SOFTWARE)
31: DC4 (SOFTWARE)
32: DC5 (SOFTWARE)
33: DC6 (SOFTWARE)
34: DC7 (SOFTWARE)
35: DC8 (SOFTWARE)
36: DC9 (SOFTWARE)
37: EC1 (SOFTWARE)
38: EC2 (SOFTWARE)
39: EC3 (SOFTWARE)
40: EC4 (SOFTWARE)
41: EC5 (SOFTWARE)
42: EC6 (SOFTWARE)
43: EC7 (SOFTWARE)
44: EC8 (SOFTWARE)
45: EC9 (SOFTWARE)
46: FC1 (SOFTWARE)
47: FC2 (SOFTWARE)
48: FC3 (SOFTWARE)
49: FC4 (SOFTWARE)
50: FC5 (SOFTWARE)
51: FC6 (SOFTWARE)
52: FC7 (SOFTWARE)
53: FC8 (SOFTWARE)
54: FC9 (SOFTWARE)
55: GC1 (SOFTWARE)
56: GC2 (SOFTWARE)
57: GC3 (SOFTWARE)
58: GC4 (SOFTWARE)
59: GC5 (SOFTWARE)
60: GC6 (SOFTWARE)
61: GC7 (SOFTWARE)
62: GC8 (SOFTWARE)
63: GC9 (SOFTWARE)
64: HC1 (SOFTWARE)
65: HC2 (SOFTWARE)
66: HC3 (SOFTWARE)
67: HC4 (SOFTWARE)
68: HC5 (SOFTWARE)
69: HC6 (SOFTWARE)
70: HC7 (SOFTWARE)
71: HC8 (SOFTWARE)
72: HC9 (SOFTWARE)
73: IC1 (SOFTWARE)
74: IC2 (SOFTWARE)
75: IC3 (SOFTWARE)
76: IC4 (SOFTWARE)
77: IC5 (SOFTWARE)
78: IC6 (SOFTWARE)
79: IC7 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
PHE A:49 , GLN A:52 , LEU A:53 , ASP A:82 , HOH A:2121
BINDING SITE FOR RESIDUE PG4 A1126
02
AC2
SOFTWARE
PHE B:49 , GLN B:52 , ASP B:82 , PEG B:1131 , HOH B:2108
BINDING SITE FOR RESIDUE PG4 B1128
03
AC3
SOFTWARE
MET B:1 , ALA B:71 , ASP B:104 , HOH B:2001 , HOH B:2109
BINDING SITE FOR RESIDUE PG4 B1129
04
AC4
SOFTWARE
PHE C:49 , GLN C:52 , ASP C:82 , PHE C:84 , HOH C:2142 , HOH C:2143
BINDING SITE FOR RESIDUE PG4 C1127
05
AC5
SOFTWARE
PHE D:49 , GLN D:52 , ASP D:82 , PHE D:84 , PHE D:114 , HOH D:2123 , ARG L:13
BINDING SITE FOR RESIDUE PG4 D1126
06
AC6
SOFTWARE
LEU E:53 , ASP E:82 , PHE E:119 , HOH E:2083 , HOH E:2084
BINDING SITE FOR RESIDUE PG4 E1126
07
AC7
SOFTWARE
PHE F:49 , ASP F:82 , ILE F:94 , PHE F:119 , HOH F:2059 , HOH F:2090
BINDING SITE FOR RESIDUE PG4 F1125
08
AC8
SOFTWARE
ARG C:13 , ACT C:1129 , PHE G:49 , LEU G:53 , ASP G:82 , PHE G:84 , PHE G:119 , HOH G:2122
BINDING SITE FOR RESIDUE PG4 G1126
09
AC9
SOFTWARE
PHE H:49 , GLN H:52 , ASP H:82 , PHE H:119 , HOH H:2092 , HOH H:2093
BINDING SITE FOR RESIDUE PG4 H1134
10
BC1
SOFTWARE
ARG A:13 , HOH A:2020 , ASN I:34 , MET I:37 , PHE I:49 , LEU I:53 , ASP I:82 , PHE I:84 , PHE I:114 , HOH I:2125
BINDING SITE FOR RESIDUE PG4 I1126
11
BC2
SOFTWARE
PHE J:49 , GLN J:52 , ASP J:82 , PHE J:119 , HOH J:2095
BINDING SITE FOR RESIDUE PG4 J1126
12
BC3
SOFTWARE
ARG E:13 , MET K:37 , PHE K:49 , GLN K:52 , ASP K:82 , PHE K:84 , PHE K:114 , HOH K:2105
BINDING SITE FOR RESIDUE PG4 K1126
13
BC4
SOFTWARE
PHE L:49 , LEU L:53 , ASP L:82 , PHE L:84 , PHE L:119 , HOH L:2079
BINDING SITE FOR RESIDUE PG4 L1126
14
BC5
SOFTWARE
PHE M:49 , GLN M:52 , LEU M:53 , ASP M:82 , PHE M:84 , PHE M:119 , HOH M:2123
BINDING SITE FOR RESIDUE PG4 M1126
15
BC6
SOFTWARE
ASN N:34 , MET N:37 , PHE N:49 , GLN N:52 , ASP N:82 , PHE N:84 , PHE N:114 , PHE N:119 , PGE N:1137 , HOH N:2134
BINDING SITE FOR RESIDUE PG4 N1134
16
BC7
SOFTWARE
PHE O:49 , ASP O:82 , PHE O:84 , PHE O:114 , PHE O:119 , PEG O:1127 , HOH O:2111
BINDING SITE FOR RESIDUE PG4 O1126
17
BC8
SOFTWARE
PHE P:49 , GLN P:52 , LEU P:53 , ASP P:82 , PHE P:84 , PHE P:119 , HOH P:2098 , HOH P:2099
BINDING SITE FOR RESIDUE PG4 P1127
18
BC9
SOFTWARE
LEU A:9 , ARG A:13 , ASP A:18 , MET I:123
BINDING SITE FOR RESIDUE PEG A1127
19
CC1
SOFTWARE
ALA F:67 , GLY F:69 , HOH F:2091
BINDING SITE FOR RESIDUE PEG F1126
20
CC2
SOFTWARE
ARG I:111 , HOH I:2127
BINDING SITE FOR RESIDUE PEG I1127
21
CC3
SOFTWARE
ARG M:73 , GLY M:74 , THR M:75 , ASP M:101 , VAL M:102 , ALA M:103 , THR M:108
BINDING SITE FOR RESIDUE PEG M1127
22
CC4
SOFTWARE
GLY D:69 , ASP D:70
BINDING SITE FOR RESIDUE PEG D1127
23
CC5
SOFTWARE
ARG L:73 , GLY L:74 , THR L:75 , VAL L:102 , THR L:108
BINDING SITE FOR RESIDUE PEG L1127
24
CC6
SOFTWARE
ARG F:95
BINDING SITE FOR RESIDUE PEG F1127
25
CC7
SOFTWARE
ALA B:67 , GLY B:69 , HOH B:2112
BINDING SITE FOR RESIDUE PEG B1130
26
CC8
SOFTWARE
PHE B:119 , PG4 B:1128 , HOH B:2057 , ALA M:16 , ASP M:18
BINDING SITE FOR RESIDUE PEG B1131
27
CC9
SOFTWARE
THR H:62 , PG4 H:1138 , HOH H:2007
BINDING SITE FOR RESIDUE PEG H1135
28
DC1
SOFTWARE
GLY I:69 , ASP I:70 , HOH I:2129 , HOH I:2130
BINDING SITE FOR RESIDUE PEG I1128
29
DC2
SOFTWARE
LEU J:9 , HOH J:2019 , PHE O:119 , PG4 O:1126
BINDING SITE FOR RESIDUE PEG O1127
30
DC3
SOFTWARE
ALA K:67 , GLY K:69 , HOH K:2074
BINDING SITE FOR RESIDUE PEG K1127
31
DC4
SOFTWARE
MET K:1 , ALA K:71 , ASP K:104 , HOH K:2107
BINDING SITE FOR RESIDUE PEG K1128
32
DC5
SOFTWARE
GLU J:28 , HIS J:41 , THR L:62
BINDING SITE FOR RESIDUE PEG L1128
33
DC6
SOFTWARE
ALA O:67 , GLY O:69 , ALA O:71
BINDING SITE FOR RESIDUE PEG O1128
34
DC7
SOFTWARE
ASP M:115 , GLN M:118 , HOH M:2045 , HOH M:2100 , HOH M:2101 , HOH M:2115 , VAL N:35 , PRO N:36
BINDING SITE FOR RESIDUE ACT M1128
35
DC8
SOFTWARE
ASP A:115 , GLN A:118 , HOH A:2095 , HOH A:2097 , HOH A:2118 , VAL B:35 , PRO B:36
BINDING SITE FOR RESIDUE ACT A1128
36
DC9
SOFTWARE
ASP C:115 , GLN C:118 , HOH C:2115 , HOH C:2117 , HOH C:2136 , VAL D:35 , PRO D:36
BINDING SITE FOR RESIDUE ACT C1128
37
EC1
SOFTWARE
HOH C:2002 , VAL G:35 , PRO G:36 , ASP H:115 , GLN H:118 , HOH H:2072 , HOH H:2074
BINDING SITE FOR RESIDUE ACT H1136
38
EC2
SOFTWARE
HOH A:2002 , VAL I:35 , PRO I:36 , ASP J:115 , GLN J:118 , HOH J:2081 , HOH J:2083
BINDING SITE FOR RESIDUE ACT J1127
39
EC3
SOFTWARE
HOH E:2003 , VAL K:35 , PRO K:36 , ASP L:115 , GLN L:118 , HOH L:2070 , HOH L:2071
BINDING SITE FOR RESIDUE ACT L1129
40
EC4
SOFTWARE
HOH J:2002 , VAL O:35 , PRO O:36 , ASP P:115 , GLN P:118 , HOH P:2084 , HOH P:2085
BINDING SITE FOR RESIDUE ACT P1128
41
EC5
SOFTWARE
ALA G:57 , ASP G:59 , PHE G:84 , THR G:85 , HOH G:2078
BINDING SITE FOR RESIDUE ACT G1127
42
EC6
SOFTWARE
LEU C:9 , ALA C:12 , MET G:123 , PG4 G:1126
BINDING SITE FOR RESIDUE ACT C1129
43
EC7
SOFTWARE
ALA H:57 , PHE H:84 , THR H:85
BINDING SITE FOR RESIDUE ACT H1137
44
EC8
SOFTWARE
HOH K:2096 , HIS L:63
BINDING SITE FOR RESIDUE ACT K1129
45
EC9
SOFTWARE
ARG I:95 , HOH I:2076 , HOH I:2132 , HOH I:2133 , HOH I:2134 , HOH I:2136 , ARG K:73 , GLY K:74 , THR K:75 , VAL K:102 , THR K:108 , HOH K:2076
BINDING SITE FOR RESIDUE PG6 I1129
46
FC1
SOFTWARE
MET N:1 , THR N:2 , ALA N:71 , ASP N:104 , HOH N:2135
BINDING SITE FOR RESIDUE PG6 N1135
47
FC2
SOFTWARE
MET D:1 , THR D:2 , ALA D:71 , ASP D:104 , HOH D:2125 , HOH D:2126
BINDING SITE FOR RESIDUE PG4 D1128
48
FC3
SOFTWARE
MET F:1 , ALA F:71 , ASP F:104
BINDING SITE FOR RESIDUE PG4 F1128
49
FC4
SOFTWARE
MET G:1 , THR G:2 , ALA G:71 , ASP G:104
BINDING SITE FOR RESIDUE PG4 G1128
50
FC5
SOFTWARE
MET O:1 , ALA O:71 , ASP O:104 , HOH O:2114
BINDING SITE FOR RESIDUE PG4 O1129
51
FC6
SOFTWARE
ARG G:111 , HOH G:2115 , GLU H:61 , THR H:62 , HIS H:63 , ARG H:95 , PEG H:1135 , HOH H:2095 , HOH H:2096 , HIS M:41
BINDING SITE FOR RESIDUE PG4 H1138
52
FC7
SOFTWARE
ASP D:29 , HIS D:41 , HOH D:2127 , HOH D:2128 , HOH D:2130 , HOH D:2131 , HIS O:63 , ARG O:95 , ARG P:111
BINDING SITE FOR RESIDUE PG4 D1129
53
FC8
SOFTWARE
MET I:1 , ALA I:71 , ASP I:104 , GLY I:105 , HOH I:2137
BINDING SITE FOR RESIDUE PG4 I1130
54
FC9
SOFTWARE
HOH H:2037 , HIS M:63 , HOH M:2125 , HOH M:2126 , ARG N:111
BINDING SITE FOR RESIDUE PGE M1129
55
GC1
SOFTWARE
ARG G:73 , ALA G:103 , EDO G:1130 , HIS N:63 , ARG N:95 , HOH N:2136
BINDING SITE FOR RESIDUE PGE N1136
56
GC2
SOFTWARE
ASP D:101 , THR D:108 , ALA D:109 , HOH D:2099 , HOH D:2109 , HOH D:2132 , HOH D:2134 , HOH D:2135
BINDING SITE FOR RESIDUE PGE D1130
57
GC3
SOFTWARE
ARG I:73 , HOH I:2086 , ARG K:95 , HOH K:2109 , ARG L:111
BINDING SITE FOR RESIDUE PGE K1130
58
GC4
SOFTWARE
HIS C:63 , HOH C:2107 , HOH C:2145 , ARG D:111 , ASP P:29
BINDING SITE FOR RESIDUE PGE C1130
59
GC5
SOFTWARE
GLN N:52 , PHE N:119 , MET N:123 , PG4 N:1134 , HOH N:2133 , LEU P:9 , ARG P:13
BINDING SITE FOR RESIDUE PGE N1137
60
GC6
SOFTWARE
ALA D:57 , ARG D:83 , THR D:85 , THR D:91 , HOH D:2140
BINDING SITE FOR RESIDUE EDO D1132
61
GC7
SOFTWARE
GLY P:69 , ASP P:70 , ARG P:73 , HOH P:2100 , HOH P:2101
BINDING SITE FOR RESIDUE EDO P1129
62
GC8
SOFTWARE
GLY G:69 , HOH G:2125 , HOH G:2126
BINDING SITE FOR RESIDUE EDO G1129
63
GC9
SOFTWARE
VAL G:102 , THR G:108 , PGE N:1136
BINDING SITE FOR RESIDUE EDO G1130
64
HC1
SOFTWARE
ARG H:73 , GLY H:74 , VAL H:102 , THR H:108
BINDING SITE FOR RESIDUE EDO H1139
65
HC2
SOFTWARE
THR J:2 , LEU J:4 , GLU J:5 , HOH J:2008 , HOH J:2013 , GLY P:117 , MET P:120
BINDING SITE FOR RESIDUE EDO P1130
66
HC3
SOFTWARE
MET D:123 , ALA L:12
BINDING SITE FOR RESIDUE EDO D1133
67
HC4
SOFTWARE
HOH K:2103 , VAL L:35 , PRO L:36 , MET L:37
BINDING SITE FOR RESIDUE EDO L1130
68
HC5
SOFTWARE
MET M:120 , HOH M:2047
BINDING SITE FOR RESIDUE EDO M1130
69
HC6
SOFTWARE
THR M:91 , GLN M:122
BINDING SITE FOR RESIDUE EDO M1131
70
HC7
SOFTWARE
ASP N:70
BINDING SITE FOR RESIDUE EDO N1138
71
HC8
SOFTWARE
GLY M:117 , ALA M:121 , THR P:2 , LEU P:4 , GLU P:5 , HOH P:2003 , HOH P:2007 , HOH P:2102
BINDING SITE FOR RESIDUE EDO P1131
72
HC9
SOFTWARE
ASP P:59 , ARG P:83 , THR P:85
BINDING SITE FOR RESIDUE EDO P1132
73
IC1
SOFTWARE
ASP P:88 , MET P:123 , HOH P:2103 , HOH P:2104
BINDING SITE FOR RESIDUE EDO P1133
74
IC2
SOFTWARE
ARG A:90 , HOH A:2093
BINDING SITE FOR RESIDUE EDO A1129
75
IC3
SOFTWARE
ASP C:29 , HOH C:2073 , HOH C:2146 , ARG O:111 , TYR O:113 , HOH O:2103 , HIS P:63 , GLU P:79 , THR P:81 , ARG P:95
BINDING SITE FOR RESIDUE EDO C1131
76
IC4
SOFTWARE
PHE F:84 , THR F:85 , THR F:91
BINDING SITE FOR RESIDUE EDO F1129
77
IC5
SOFTWARE
GLN D:122 , HOH D:2101
BINDING SITE FOR RESIDUE EDO D1134
78
IC6
SOFTWARE
HIS A:63 , ARG A:95 , HOH A:2123 , HOH A:2124 , ARG B:111 , HIS E:41
BINDING SITE FOR RESIDUE PG5 A1130
79
IC7
SOFTWARE
GLU B:28 , ASP F:59 , GLU F:61
BINDING SITE FOR RESIDUE HIS F1130
[
close Site info
]
SAPs(SNPs)/Variants
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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Asymmetric Unit 1
Rendering
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Example Commands
Example Command
Action
select :A, :C
select chains 'A' and 'C'
select [ALA]:A
select all 'ALA' residues (Alanines) in chain 'A'
select 5-10
select residue range 5 to 10 in all chains
select 5-10:A
select residue range 5 to 10 in chain 'A'
select protein & not helix & not sheet
select non-helix/non-sheet protein parts
set fontsize 20
set label size to 20 (allowed range: 1-58)
ssbonds 100
show SS bonds with a radius of 100 units (=0.4Å)
wireframe 100
show bonds with a radius of 100 units (=0.4Å)
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Log
Note:
In this "Basic Interface" any change in the selection of a pulldown menu automatically triggers an action (one-step mechanism).
View and selection are coupled in the structure specific controls (e.g. "Hetero","PROSITE") .
Note:
In this "Advanced Interface" any change in the selection of a pulldown menu only sets the target for the corresponding control buttons (two-step mechanism).
View and selection are set independently in the structure specific controls (e.g. "Hetero","PROSITE") .
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Asym.Unit (395 KB)
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