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5A94
Asym. Unit
Info
Asym.Unit (706 KB)
Biol.Unit 1 (352 KB)
Biol.Unit 2 (352 KB)
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(1)
Title
:
CRYSTAL STRUCTURE BETA-GLUCANASE SDGLUC5_26A FROM SACCHAROPHAGUS DEGRADANS IN COMPLEX WITH TETRASACCHARIDE A, FORM 1
Authors
:
G. Sulzenbacher, M. Lafond, T. Freyd, B. Henrissat, R. M. Coutinho, J. G M. L. Garron
Date
:
17 Jul 15 (Deposition) - 20 Jan 16 (Release) - 06 Apr 16 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.99
Chains
:
Asym. Unit : A,B,C,D,E,F
Biol. Unit 1: D,E,F (1x)
Biol. Unit 2: A,B,C (1x)
Keywords
:
Hydrolase, Cazyme, Glycoside Hydrolase, Beta-Glucanase, Gh5_26
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. Lafond, G. Sulzenbacher, T. Freyd, B. Henrissat, J. G. Berrin, M. L. Garron
The Quaternary Structure Of A Glycoside Hydrolase Dictates Specificity Towards Beta-Glucans
J. Biol. Chem. V. 291 7183 2016
[
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Hetero Components
(3, 30)
Info
All Hetero Components
1a: BETA-D-GLUCOSE (BGCa)
1b: BETA-D-GLUCOSE (BGCb)
1c: BETA-D-GLUCOSE (BGCc)
1d: BETA-D-GLUCOSE (BGCd)
1e: BETA-D-GLUCOSE (BGCe)
1f: BETA-D-GLUCOSE (BGCf)
1g: BETA-D-GLUCOSE (BGCg)
1h: BETA-D-GLUCOSE (BGCh)
1i: BETA-D-GLUCOSE (BGCi)
1j: BETA-D-GLUCOSE (BGCj)
1k: BETA-D-GLUCOSE (BGCk)
1l: BETA-D-GLUCOSE (BGCl)
1m: BETA-D-GLUCOSE (BGCm)
1n: BETA-D-GLUCOSE (BGCn)
1o: BETA-D-GLUCOSE (BGCo)
1p: BETA-D-GLUCOSE (BGCp)
1q: BETA-D-GLUCOSE (BGCq)
1r: BETA-D-GLUCOSE (BGCr)
2a: CHLORIDE ION (CLa)
2b: CHLORIDE ION (CLb)
2c: CHLORIDE ION (CLc)
2d: CHLORIDE ION (CLd)
2e: CHLORIDE ION (CLe)
2f: CHLORIDE ION (CLf)
3a: MAGNESIUM ION (MGa)
3b: MAGNESIUM ION (MGb)
3c: MAGNESIUM ION (MGc)
3d: MAGNESIUM ION (MGd)
3e: MAGNESIUM ION (MGe)
3f: MAGNESIUM ION (MGf)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
BGC
18
Ligand/Ion
BETA-D-GLUCOSE
2
CL
6
Ligand/Ion
CHLORIDE ION
3
MG
6
Ligand/Ion
MAGNESIUM ION
[
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Sites
(18, 18)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
VAL A:178 , VAL A:181 , HOH A:2158 , HOH A:2159 , HOH A:2162
BINDING SITE FOR RESIDUE MG A 402
02
AC2
SOFTWARE
THR A:191 , THR A:192 , ARG A:200 , PHE A:230 , ASN A:231 , HOH A:2166 , HOH A:2177
BINDING SITE FOR RESIDUE CL A 403
03
AC3
SOFTWARE
VAL B:178 , VAL B:181 , HOH B:2133 , HOH B:2134 , HOH B:2138
BINDING SITE FOR RESIDUE MG B 402
04
AC4
SOFTWARE
THR B:192 , ARG B:200 , ASN B:231 , HOH B:2154
BINDING SITE FOR RESIDUE CL B 403
05
AC5
SOFTWARE
VAL C:178 , VAL C:181 , HOH C:2134 , HOH C:2137 , HOH C:2140
BINDING SITE FOR RESIDUE MG C 402
06
AC6
SOFTWARE
THR C:191 , THR C:192 , ARG C:200 , ASN C:231 , HOH C:2143
BINDING SITE FOR RESIDUE CL C 403
07
AC7
SOFTWARE
VAL D:178 , VAL D:181 , HOH D:2100 , HOH D:2101 , HOH D:2104
BINDING SITE FOR RESIDUE MG D 402
08
AC8
SOFTWARE
THR D:192 , ARG D:200 , ASN D:231 , HOH D:2108 , HOH D:2121
BINDING SITE FOR RESIDUE CL D 403
09
AC9
SOFTWARE
VAL E:178 , VAL E:181 , HOH E:2149 , HOH E:2152 , HOH E:2158
BINDING SITE FOR RESIDUE MG E 402
10
BC1
SOFTWARE
THR E:191 , THR E:192 , ARG E:200 , PHE E:230 , ASN E:231
BINDING SITE FOR RESIDUE CL E 403
11
BC2
SOFTWARE
VAL F:178 , VAL F:181 , HOH F:2111 , HOH F:2113 , HOH F:2115
BINDING SITE FOR RESIDUE MG F 402
12
BC3
SOFTWARE
THR F:191 , THR F:192 , ARG F:200 , ASN F:231 , HOH F:2118 , HOH F:2122
BINDING SITE FOR RESIDUE CL F 403
13
BC4
SOFTWARE
HIS A:107 , HIS A:142 , ILE A:144 , TYR A:157 , ASN A:188 , GLU A:189 , GLN A:291 , TYR A:300 , HIS A:303 , TRP A:330 , ASP A:335 , TRP A:336 , SER A:337 , HOH A:2141 , HOH A:2305 , TRP B:32 , ASP B:33
BINDING SITE FOR POLY-SACCHARIDE RESIDUES BGC A 399 THROUGH BGC A 401
14
BC5
SOFTWARE
HIS A:107 , HIS A:142 , ILE A:144 , TYR A:157 , ASN A:188 , GLU A:189 , GLN A:291 , TYR A:300 , HIS A:303 , TRP A:330 , ASP A:335 , TRP A:336 , SER A:337 , HOH A:2141 , HOH A:2305 , TRP B:32 , ASP B:33 , HIS B:107 , HIS B:142 , ILE B:144 , TYR B:157 , ASN B:188 , GLU B:189 , GLN B:291 , TYR B:300 , HIS B:303 , TRP B:330 , ASP B:335 , TRP B:336 , SER B:337 , HOH B:2118 , HOH B:2225 , HOH B:2258 , HOH B:2259 , TRP C:32 , ASP C:33
BINDING SITE FOR POLY-SACCHARIDE RESIDUES BGC B 399 THROUGH BGC B 401
15
BC6
SOFTWARE
TRP A:32 , ASP A:33 , HIS B:107 , HIS B:142 , ILE B:144 , TYR B:157 , ASN B:188 , GLU B:189 , GLN B:291 , TYR B:300 , HIS B:303 , TRP B:330 , ASP B:335 , TRP B:336 , SER B:337 , HOH B:2118 , HOH B:2225 , HOH B:2258 , HOH B:2259 , TRP C:32 , ASP C:33 , HIS C:107 , HIS C:142 , ILE C:144 , MET C:156 , TYR C:157 , ASN C:188 , GLU C:189 , GLN C:291 , TYR C:300 , HIS C:303 , TRP C:330 , ASP C:335 , TRP C:336 , SER C:337 , HOH C:2120 , HOH C:2253 , HOH C:2254
BINDING SITE FOR POLY-SACCHARIDE RESIDUES BGC C 399 THROUGH BGC C 401
16
BC7
SOFTWARE
TRP A:32 , ASP A:33 , HIS C:107 , HIS C:142 , ILE C:144 , MET C:156 , TYR C:157 , ASN C:188 , GLU C:189 , GLN C:291 , TYR C:300 , HIS C:303 , TRP C:330 , ASP C:335 , TRP C:336 , SER C:337 , HOH C:2120 , HOH C:2253 , HOH C:2254 , HIS D:107 , HIS D:142 , ILE D:144 , TYR D:157 , ASN D:188 , GLU D:189 , GLN D:291 , TYR D:300 , HIS D:303 , VAL D:306 , TRP D:330 , ASP D:335 , TRP D:336 , SER D:337 , HOH D:2217 , TRP E:32 , ASP E:33
BINDING SITE FOR POLY-SACCHARIDE RESIDUES BGC D 399 THROUGH BGC D 401
17
BC8
SOFTWARE
HIS D:107 , HIS D:142 , ILE D:144 , TYR D:157 , ASN D:188 , GLU D:189 , GLN D:291 , TYR D:300 , HIS D:303 , VAL D:306 , TRP D:330 , ASP D:335 , TRP D:336 , SER D:337 , HOH D:2217 , TRP E:32 , ASP E:33 , HIS E:107 , HIS E:142 , ILE E:144 , MET E:156 , TYR E:157 , ASN E:188 , GLU E:189 , GLN E:291 , TYR E:300 , HIS E:303 , TRP E:330 , ASP E:335 , TRP E:336 , SER E:337 , HOH E:2284 , HOH E:2285 , TRP F:32 , ASP F:33
BINDING SITE FOR POLY-SACCHARIDE RESIDUES BGC E 399 THROUGH BGC E 401
18
BC9
SOFTWARE
TRP D:32 , ASP D:33 , HIS E:107 , HIS E:142 , ILE E:144 , MET E:156 , TYR E:157 , ASN E:188 , GLU E:189 , GLN E:291 , TYR E:300 , HIS E:303 , TRP E:330 , ASP E:335 , TRP E:336 , SER E:337 , HOH E:2284 , HOH E:2285 , TRP F:32 , ASP F:33 , HIS F:107 , HIS F:142 , ILE F:144 , MET F:156 , TYR F:157 , ASN F:188 , GLU F:189 , GLN F:291 , TYR F:300 , HIS F:303 , TRP F:330 , TRP F:336 , SER F:337 , HOH F:2219 , HOH F:2220 , HOH F:2221
BINDING SITE FOR POLY-SACCHARIDE RESIDUES BGC F 399 THROUGH BGC F 401
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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