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4ZYQ
Asym. Unit
Info
Asym.Unit (1013 KB)
Biol.Unit 1 (507 KB)
Biol.Unit 2 (505 KB)
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(1)
Title
:
X-RAY CRYSTAL STRUCTURE OF PFA-M17 IN COMPLEX WITH HYDROXAMIC ACID-BASED INHIBITOR 10S
Authors
:
N. Drinkwater, S. Mcgowan
Date
:
22 May 15 (Deposition) - 30 Mar 16 (Release) - 30 Mar 16 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.60
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L
Biol. Unit 1: A,B,C,D,E,F (1x)
Biol. Unit 2: G,H,I,J,K,L (1x)
Keywords
:
M17 Leucyl-Aminopeptidase, Protease, Inhibitor, Hydroxamic Acid, Hydrolase-Hydrolase Inhibitor Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
N. Drinkwater, N. B. Vinh, S. N. Mistry, R. S. Bamert, C. Ruggeri, J. P. Holleran, S. Loganathan, A. Paiardini, S. A. Charman, A. K. Powell, V. M. Avery, S. Mcgowan, P. J. Scammells
Potent Dual Inhibitors Of Plasmodium Falciparum M1 And M17 Aminopeptidases Through Optimization Of S1 Pocket Interactions.
Eur. J. Med. Chem. V. 110 43 2016
[
close entry info
]
Hetero Components
(5, 76)
Info
All Hetero Components
1a: PENTAETHYLENE GLYCOL (1PEa)
1b: PENTAETHYLENE GLYCOL (1PEb)
1c: PENTAETHYLENE GLYCOL (1PEc)
1d: PENTAETHYLENE GLYCOL (1PEd)
1e: PENTAETHYLENE GLYCOL (1PEe)
1f: PENTAETHYLENE GLYCOL (1PEf)
1g: PENTAETHYLENE GLYCOL (1PEg)
1h: PENTAETHYLENE GLYCOL (1PEh)
1i: PENTAETHYLENE GLYCOL (1PEi)
1j: PENTAETHYLENE GLYCOL (1PEj)
1k: PENTAETHYLENE GLYCOL (1PEk)
1l: PENTAETHYLENE GLYCOL (1PEl)
1m: PENTAETHYLENE GLYCOL (1PEm)
1n: PENTAETHYLENE GLYCOL (1PEn)
1o: PENTAETHYLENE GLYCOL (1PEo)
1p: PENTAETHYLENE GLYCOL (1PEp)
1q: PENTAETHYLENE GLYCOL (1PEq)
1r: PENTAETHYLENE GLYCOL (1PEr)
1s: PENTAETHYLENE GLYCOL (1PEs)
1t: PENTAETHYLENE GLYCOL (1PEt)
2a: N-{(1R)-2-(HYDROXYAMINO)-1-[3'-(N'... (4U6a)
2b: N-{(1R)-2-(HYDROXYAMINO)-1-[3'-(N'... (4U6b)
2c: N-{(1R)-2-(HYDROXYAMINO)-1-[3'-(N'... (4U6c)
2d: N-{(1R)-2-(HYDROXYAMINO)-1-[3'-(N'... (4U6d)
2e: N-{(1R)-2-(HYDROXYAMINO)-1-[3'-(N'... (4U6e)
2f: N-{(1R)-2-(HYDROXYAMINO)-1-[3'-(N'... (4U6f)
2g: N-{(1R)-2-(HYDROXYAMINO)-1-[3'-(N'... (4U6g)
2h: N-{(1R)-2-(HYDROXYAMINO)-1-[3'-(N'... (4U6h)
2i: N-{(1R)-2-(HYDROXYAMINO)-1-[3'-(N'... (4U6i)
2j: N-{(1R)-2-(HYDROXYAMINO)-1-[3'-(N'... (4U6j)
2k: N-{(1R)-2-(HYDROXYAMINO)-1-[3'-(N'... (4U6k)
2l: N-{(1R)-2-(HYDROXYAMINO)-1-[3'-(N'... (4U6l)
3a: CARBONATE ION (CO3a)
3b: CARBONATE ION (CO3b)
3c: CARBONATE ION (CO3c)
3d: CARBONATE ION (CO3d)
3e: CARBONATE ION (CO3e)
3f: CARBONATE ION (CO3f)
3g: CARBONATE ION (CO3g)
3h: CARBONATE ION (CO3h)
3i: CARBONATE ION (CO3i)
3j: CARBONATE ION (CO3j)
3k: CARBONATE ION (CO3k)
3l: CARBONATE ION (CO3l)
4a: SULFATE ION (SO4a)
4b: SULFATE ION (SO4b)
4c: SULFATE ION (SO4c)
4d: SULFATE ION (SO4d)
4e: SULFATE ION (SO4e)
4f: SULFATE ION (SO4f)
4g: SULFATE ION (SO4g)
4h: SULFATE ION (SO4h)
5a: ZINC ION (ZNa)
5b: ZINC ION (ZNb)
5c: ZINC ION (ZNc)
5d: ZINC ION (ZNd)
5e: ZINC ION (ZNe)
5f: ZINC ION (ZNf)
5g: ZINC ION (ZNg)
5h: ZINC ION (ZNh)
5i: ZINC ION (ZNi)
5j: ZINC ION (ZNj)
5k: ZINC ION (ZNk)
5l: ZINC ION (ZNl)
5m: ZINC ION (ZNm)
5n: ZINC ION (ZNn)
5o: ZINC ION (ZNo)
5p: ZINC ION (ZNp)
5q: ZINC ION (ZNq)
5r: ZINC ION (ZNr)
5s: ZINC ION (ZNs)
5t: ZINC ION (ZNt)
5u: ZINC ION (ZNu)
5v: ZINC ION (ZNv)
5w: ZINC ION (ZNw)
5x: ZINC ION (ZNx)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
1PE
20
Ligand/Ion
PENTAETHYLENE GLYCOL
2
4U6
12
Ligand/Ion
N-{(1R)-2-(HYDROXYAMINO)-1-[3'-(N'-HYDROXYCARBAMIMIDOYL)BIPHENYL-4-YL]-2-OXOETHYL}-2,2-DIMETHYLPROPANAMIDE
3
CO3
12
Ligand/Ion
CARBONATE ION
4
SO4
8
Ligand/Ion
SULFATE ION
5
ZN
24
Ligand/Ion
ZINC ION
[
close Hetero Component info
]
Sites
(76, 76)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
13: AD4 (SOFTWARE)
14: AD5 (SOFTWARE)
15: AD6 (SOFTWARE)
16: AD7 (SOFTWARE)
17: AD8 (SOFTWARE)
18: AD9 (SOFTWARE)
19: AE1 (SOFTWARE)
20: AE2 (SOFTWARE)
21: AE3 (SOFTWARE)
22: AE4 (SOFTWARE)
23: AE5 (SOFTWARE)
24: AE6 (SOFTWARE)
25: AE7 (SOFTWARE)
26: AE8 (SOFTWARE)
27: AE9 (SOFTWARE)
28: AF1 (SOFTWARE)
29: AF2 (SOFTWARE)
30: AF3 (SOFTWARE)
31: AF4 (SOFTWARE)
32: AF5 (SOFTWARE)
33: AF6 (SOFTWARE)
34: AF7 (SOFTWARE)
35: AF8 (SOFTWARE)
36: AF9 (SOFTWARE)
37: AG1 (SOFTWARE)
38: AG2 (SOFTWARE)
39: AG3 (SOFTWARE)
40: AG4 (SOFTWARE)
41: AG5 (SOFTWARE)
42: AG6 (SOFTWARE)
43: AG7 (SOFTWARE)
44: AG8 (SOFTWARE)
45: AG9 (SOFTWARE)
46: AH1 (SOFTWARE)
47: AH2 (SOFTWARE)
48: AH3 (SOFTWARE)
49: AH4 (SOFTWARE)
50: AH5 (SOFTWARE)
51: AH6 (SOFTWARE)
52: AH7 (SOFTWARE)
53: AH8 (SOFTWARE)
54: AH9 (SOFTWARE)
55: AI1 (SOFTWARE)
56: AI2 (SOFTWARE)
57: AI3 (SOFTWARE)
58: AI4 (SOFTWARE)
59: AI5 (SOFTWARE)
60: AI6 (SOFTWARE)
61: AI7 (SOFTWARE)
62: AI8 (SOFTWARE)
63: AI9 (SOFTWARE)
64: AJ1 (SOFTWARE)
65: AJ2 (SOFTWARE)
66: AJ3 (SOFTWARE)
67: AJ4 (SOFTWARE)
68: AJ5 (SOFTWARE)
69: AJ6 (SOFTWARE)
70: AJ7 (SOFTWARE)
71: AJ8 (SOFTWARE)
72: AJ9 (SOFTWARE)
73: AK1 (SOFTWARE)
74: AK2 (SOFTWARE)
75: AK3 (SOFTWARE)
76: AK4 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
LYS A:374 , ASP A:379 , LYS A:386 , GLY A:390 , MET A:392 , PHE A:398 , ASP A:459 , GLU A:461 , LEU A:487 , THR A:488 , GLY A:489 , LEU A:492 , SER A:554 , ALA A:577 , ZN A:1002 , ZN A:1003 , CO3 A:1004 , HOH A:1129
binding site for residue 4U6 A 1001
02
AC2
SOFTWARE
LYS A:374 , ASP A:379 , ASP A:399 , GLU A:461 , 4U6 A:1001 , ZN A:1003
binding site for residue ZN A 1002
03
AC3
SOFTWARE
ASP A:379 , ASP A:459 , GLU A:461 , 4U6 A:1001 , ZN A:1002
binding site for residue ZN A 1003
04
AC4
SOFTWARE
LYS A:374 , ALA A:460 , GLY A:462 , ARG A:463 , LEU A:487 , 4U6 A:1001
binding site for residue CO3 A 1004
05
AC5
SOFTWARE
TYR A:103 , ASN A:104 , HIS A:108 , LYS A:320 , TYR A:411 , HOH A:1136
binding site for residue 1PE A 1005
06
AC6
SOFTWARE
TYR A:103 , GLU A:316 , LYS A:320
binding site for residue 1PE A 1006
07
AC7
SOFTWARE
ILE A:101 , GLU A:102 , TYR A:103 , ASN A:104
binding site for residue SO4 A 1007
08
AC8
SOFTWARE
LYS B:374 , ASP B:379 , LYS B:386 , GLY B:390 , MET B:392 , PHE B:398 , ASP B:459 , GLU B:461 , LEU B:487 , THR B:488 , GLY B:489 , LEU B:492 , ALA B:577 , ZN B:1002 , ZN B:1003 , CO3 B:1004
binding site for residue 4U6 B 1001
09
AC9
SOFTWARE
LYS B:374 , ASP B:379 , ASP B:399 , GLU B:461 , 4U6 B:1001 , ZN B:1003
binding site for residue ZN B 1002
10
AD1
SOFTWARE
ASP B:379 , ASP B:459 , GLU B:461 , 4U6 B:1001 , ZN B:1002
binding site for residue ZN B 1003
11
AD2
SOFTWARE
LYS B:374 , ALA B:460 , GLY B:462 , ARG B:463 , LEU B:487 , 4U6 B:1001
binding site for residue CO3 B 1004
12
AD3
SOFTWARE
TYR B:103 , LYS B:320 , TYR B:411
binding site for residue 1PE B 1005
13
AD4
SOFTWARE
SER A:435 , LYS A:436 , SER B:435 , LYS B:436 , SER C:435 , LYS C:436
binding site for residue SO4 B 1006
14
AD5
SOFTWARE
LYS C:374 , ASP C:379 , LYS C:386 , GLY C:390 , MET C:392 , PHE C:398 , ASP C:459 , GLU C:461 , LEU C:487 , THR C:488 , GLY C:489 , LEU C:492 , ALA C:577 , ZN C:1002 , ZN C:1003 , CO3 C:1004
binding site for residue 4U6 C 1001
15
AD6
SOFTWARE
LYS C:374 , ASP C:379 , ASP C:399 , GLU C:461 , 4U6 C:1001 , ZN C:1003
binding site for residue ZN C 1002
16
AD7
SOFTWARE
ASP C:379 , ASP C:459 , GLU C:461 , 4U6 C:1001 , ZN C:1002
binding site for residue ZN C 1003
17
AD8
SOFTWARE
LYS C:374 , ALA C:460 , GLY C:462 , ARG C:463 , LEU C:487 , 4U6 C:1001
binding site for residue CO3 C 1004
18
AD9
SOFTWARE
TYR C:103 , GLU C:316 , GLN C:319 , LYS C:320 , 1PE C:1006
binding site for residue 1PE C 1005
19
AE1
SOFTWARE
TYR C:103 , ASN C:104 , TYR C:411 , 1PE C:1005
binding site for residue 1PE C 1006
20
AE2
SOFTWARE
LYS D:374 , ASP D:379 , LYS D:386 , GLY D:390 , MET D:392 , ASP D:459 , GLU D:461 , LEU D:487 , THR D:488 , GLY D:489 , LEU D:492 , ALA D:577 , ZN D:1002 , ZN D:1003 , CO3 D:1004
binding site for residue 4U6 D 1001
21
AE3
SOFTWARE
LYS D:374 , ASP D:379 , ASP D:399 , GLU D:461 , 4U6 D:1001 , ZN D:1003
binding site for residue ZN D 1002
22
AE4
SOFTWARE
ASP D:379 , ASP D:459 , GLU D:461 , 4U6 D:1001 , ZN D:1002
binding site for residue ZN D 1003
23
AE5
SOFTWARE
LYS D:374 , ALA D:460 , GLY D:462 , ARG D:463 , LEU D:487 , 4U6 D:1001
binding site for residue CO3 D 1004
24
AE6
SOFTWARE
GLU D:316 , LYS D:320
binding site for residue 1PE D 1005
25
AE7
SOFTWARE
TYR D:103 , ASN D:104 , HIS D:108 , PHE D:289 , LYS D:320 , TYR D:411
binding site for residue 1PE D 1006
26
AE8
SOFTWARE
SER D:435 , LYS D:436 , SER E:435 , LYS E:436 , SER F:435 , LYS F:436
binding site for residue SO4 D 1007
27
AE9
SOFTWARE
LYS E:374 , ASP E:379 , LYS E:386 , GLY E:390 , MET E:392 , ASP E:459 , GLU E:461 , LEU E:487 , THR E:488 , GLY E:489 , LEU E:492 , ZN E:1002 , ZN E:1003 , CO3 E:1004
binding site for residue 4U6 E 1001
28
AF1
SOFTWARE
LYS E:374 , ASP E:379 , ASP E:399 , GLU E:461 , 4U6 E:1001 , ZN E:1003
binding site for residue ZN E 1002
29
AF2
SOFTWARE
ASP E:379 , ASP E:459 , GLU E:461 , 4U6 E:1001 , ZN E:1002
binding site for residue ZN E 1003
30
AF3
SOFTWARE
LYS E:374 , ALA E:460 , GLY E:462 , ARG E:463 , LEU E:487 , 4U6 E:1001
binding site for residue CO3 E 1004
31
AF4
SOFTWARE
TYR E:103 , GLU E:316 , GLN E:319 , LYS E:320
binding site for residue 1PE E 1005
32
AF5
SOFTWARE
TYR E:103 , HIS E:108 , LYS E:320 , TYR E:411 , HOH E:1216
binding site for residue 1PE E 1006
33
AF6
SOFTWARE
LYS F:374 , ASP F:379 , LYS F:386 , GLY F:390 , SER F:391 , MET F:392 , PHE F:398 , ASP F:459 , GLU F:461 , LEU F:487 , THR F:488 , GLY F:489 , LEU F:492 , ALA F:577 , ZN F:1002 , ZN F:1003 , CO3 F:1004 , HOH F:1144
binding site for residue 4U6 F 1001
34
AF7
SOFTWARE
LYS F:374 , ASP F:379 , ASP F:399 , GLU F:461 , 4U6 F:1001 , ZN F:1003
binding site for residue ZN F 1002
35
AF8
SOFTWARE
ASP F:379 , ASP F:459 , GLU F:461 , 4U6 F:1001 , ZN F:1002
binding site for residue ZN F 1003
36
AF9
SOFTWARE
LYS F:374 , ALA F:460 , GLU F:461 , GLY F:462 , ARG F:463 , LEU F:487 , 4U6 F:1001
binding site for residue CO3 F 1004
37
AG1
SOFTWARE
TYR F:103 , ASN F:104 , HIS F:108 , LYS F:320 , TYR F:411
binding site for residue 1PE F 1005
38
AG2
SOFTWARE
TYR F:103 , ASN F:104 , GLU F:316 , GLN F:319 , LYS F:320 , SO4 F:1007
binding site for residue 1PE F 1006
39
AG3
SOFTWARE
GLU F:102 , TYR F:103 , ASN F:104 , 1PE F:1006 , HOH F:1142
binding site for residue SO4 F 1007
40
AG4
SOFTWARE
LYS G:374 , ASP G:379 , LYS G:386 , GLY G:390 , MET G:392 , ASP G:459 , GLU G:461 , LEU G:487 , THR G:488 , GLY G:489 , LEU G:492 , ALA G:577 , ZN G:1002 , ZN G:1003 , CO3 G:1004
binding site for residue 4U6 G 1001
41
AG5
SOFTWARE
LYS G:374 , ASP G:379 , ASP G:399 , GLU G:461 , 4U6 G:1001 , ZN G:1003
binding site for residue ZN G 1002
42
AG6
SOFTWARE
ASP G:379 , ASP G:459 , GLU G:461 , 4U6 G:1001 , ZN G:1002
binding site for residue ZN G 1003
43
AG7
SOFTWARE
LYS G:374 , ALA G:460 , GLY G:462 , ARG G:463 , LEU G:487 , 4U6 G:1001
binding site for residue CO3 G 1004
44
AG8
SOFTWARE
TYR G:103 , ASN G:104 , HIS G:108 , TYR G:411
binding site for residue 1PE G 1005
45
AG9
SOFTWARE
TYR A:115 , ASN A:122 , GLU A:124 , TYR A:270 , TYR G:115 , ASN G:122 , TYR G:270 , 1PE G:1007 , HOH G:1140
binding site for residue 1PE G 1006
46
AH1
SOFTWARE
ASN A:122 , ASN G:122 , TYR G:270 , 1PE G:1006 , HOH G:1154
binding site for residue 1PE G 1007
47
AH2
SOFTWARE
SER G:435 , LYS G:436 , SER H:435 , LYS H:436 , SER I:435 , LYS I:436
binding site for residue SO4 G 1008
48
AH3
SOFTWARE
LYS H:374 , ASP H:379 , LYS H:386 , GLY H:390 , MET H:392 , PHE H:398 , ASP H:459 , GLU H:461 , LEU H:487 , GLY H:489 , LEU H:492 , ALA H:577 , ZN H:1002 , ZN H:1003 , CO3 H:1004
binding site for residue 4U6 H 1001
49
AH4
SOFTWARE
LYS H:374 , ASP H:379 , ASP H:399 , GLU H:461 , 4U6 H:1001 , ZN H:1003
binding site for residue ZN H 1002
50
AH5
SOFTWARE
ASP H:379 , ASP H:459 , GLU H:461 , 4U6 H:1001 , ZN H:1002
binding site for residue ZN H 1003
51
AH6
SOFTWARE
LYS H:374 , ALA H:460 , GLU H:461 , GLY H:462 , ARG H:463 , LEU H:487 , 4U6 H:1001
binding site for residue CO3 H 1004
52
AH7
SOFTWARE
TYR H:103 , GLU H:316 , LYS H:320
binding site for residue 1PE H 1005
53
AH8
SOFTWARE
LYS I:374 , ASP I:379 , LYS I:386 , GLY I:390 , SER I:391 , MET I:392 , PHE I:398 , ASP I:459 , GLU I:461 , LEU I:487 , THR I:488 , GLY I:489 , LEU I:492 , ALA I:577 , ZN I:1002 , ZN I:1003 , CO3 I:1004
binding site for residue 4U6 I 1001
54
AH9
SOFTWARE
LYS I:374 , ASP I:379 , ASP I:399 , GLU I:461 , 4U6 I:1001 , ZN I:1003
binding site for residue ZN I 1002
55
AI1
SOFTWARE
ASP I:379 , ASP I:459 , GLU I:461 , 4U6 I:1001 , ZN I:1002
binding site for residue ZN I 1003
56
AI2
SOFTWARE
LYS I:374 , ALA I:460 , GLY I:462 , ARG I:463 , LEU I:487 , 4U6 I:1001
binding site for residue CO3 I 1004
57
AI3
SOFTWARE
TYR I:103 , GLU I:316 , LYS I:320
binding site for residue 1PE I 1005
58
AI4
SOFTWARE
TYR I:103 , HIS I:108 , LYS I:320 , TYR I:411
binding site for residue 1PE I 1006
59
AI5
SOFTWARE
LYS J:374 , ASP J:379 , LYS J:386 , GLY J:390 , MET J:392 , ASP J:459 , GLU J:461 , LEU J:487 , THR J:488 , GLY J:489 , LEU J:492 , ALA J:577 , ZN J:1002 , ZN J:1003 , CO3 J:1004
binding site for residue 4U6 J 1001
60
AI6
SOFTWARE
LYS J:374 , ASP J:379 , ASP J:399 , GLU J:461 , 4U6 J:1001 , ZN J:1003
binding site for residue ZN J 1002
61
AI7
SOFTWARE
ASP J:379 , ASP J:459 , GLU J:461 , 4U6 J:1001 , ZN J:1002
binding site for residue ZN J 1003
62
AI8
SOFTWARE
LYS J:374 , ALA J:460 , GLU J:461 , GLY J:462 , ARG J:463 , LEU J:487 , 4U6 J:1001
binding site for residue CO3 J 1004
63
AI9
SOFTWARE
TYR J:103 , ASN J:104 , HIS J:108 , PHE J:289 , LYS J:320 , TYR J:411 , HOH J:1119
binding site for residue 1PE J 1005
64
AJ1
SOFTWARE
GLU J:102 , TYR J:103 , ASN J:104
binding site for residue SO4 J 1006
65
AJ2
SOFTWARE
LYS K:374 , ASP K:379 , LYS K:386 , GLY K:390 , MET K:392 , ASP K:459 , GLU K:461 , LEU K:487 , THR K:488 , GLY K:489 , LEU K:492 , ALA K:577 , ZN K:1002 , ZN K:1003 , CO3 K:1004 , HOH K:1127
binding site for residue 4U6 K 1001
66
AJ3
SOFTWARE
LYS K:374 , ASP K:379 , ASP K:399 , GLU K:461 , 4U6 K:1001 , ZN K:1003 , HOH K:1127
binding site for residue ZN K 1002
67
AJ4
SOFTWARE
ASP K:379 , ASP K:459 , GLU K:461 , 4U6 K:1001 , ZN K:1002
binding site for residue ZN K 1003
68
AJ5
SOFTWARE
LYS K:374 , ALA K:460 , GLY K:462 , ARG K:463 , LEU K:487 , 4U6 K:1001
binding site for residue CO3 K 1004
69
AJ6
SOFTWARE
TYR K:103 , HIS K:108 , TYR K:411
binding site for residue 1PE K 1005
70
AJ7
SOFTWARE
PHE I:156 , LYS I:164 , TYR K:176 , MET K:177 , PHE K:178 , SER K:184
binding site for residue SO4 K 1006
71
AJ8
SOFTWARE
LYS L:374 , ASP L:379 , LYS L:386 , GLY L:390 , MET L:392 , ASP L:459 , GLU L:461 , LEU L:487 , THR L:488 , GLY L:489 , LEU L:492 , ALA L:577 , ZN L:1002 , ZN L:1003 , CO3 L:1004
binding site for residue 4U6 L 1001
72
AJ9
SOFTWARE
LYS L:374 , ASP L:379 , ASP L:399 , GLU L:461 , 4U6 L:1001 , ZN L:1003
binding site for residue ZN L 1002
73
AK1
SOFTWARE
ASP L:379 , ASP L:459 , GLU L:461 , 4U6 L:1001 , ZN L:1002
binding site for residue ZN L 1003
74
AK2
SOFTWARE
LYS L:374 , ALA L:460 , GLU L:461 , GLY L:462 , ARG L:463 , LEU L:487 , 4U6 L:1001
binding site for residue CO3 L 1004
75
AK3
SOFTWARE
TYR L:103 , ASN L:104 , LYS L:320 , TYR L:411 , HOH L:1163
binding site for residue 1PE L 1005
76
AK4
SOFTWARE
SER J:435 , LYS J:436 , SER K:435 , LYS K:436 , SER L:435 , LYS L:436
binding site for residue SO4 L 1006
[
close Site info
]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
Select:
Label:
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Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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CATH Domains
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Pfam Domains
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Atom Selection
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Protein
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Chain G
Chain H
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Chain L
Asymmetric Unit 1
Rendering
(selected part)
Molecule Coloring
(selected part)
by Chain (Asym. Unit)
by Chain (Biol. Unit)
by Secondary Structure
by Atom (CPK)
by SCOP Domain
by CATH Domain
by Pfam Domain
by Asymmetric Unit
by Exon
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Miscellaneous
Script
Example Commands
Example Command
Action
select :A, :C
select chains 'A' and 'C'
select [ALA]:A
select all 'ALA' residues (Alanines) in chain 'A'
select 5-10
select residue range 5 to 10 in all chains
select 5-10:A
select residue range 5 to 10 in chain 'A'
select protein & not helix & not sheet
select non-helix/non-sheet protein parts
set fontsize 20
set label size to 20 (allowed range: 1-58)
ssbonds 100
show SS bonds with a radius of 100 units (=0.4Å)
wireframe 100
show bonds with a radius of 100 units (=0.4Å)
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Log
Note:
In this "Basic Interface" any change in the selection of a pulldown menu automatically triggers an action (one-step mechanism).
View and selection are coupled in the structure specific controls (e.g. "Hetero","PROSITE") .
Note:
In this "Advanced Interface" any change in the selection of a pulldown menu only sets the target for the corresponding control buttons (two-step mechanism).
View and selection are set independently in the structure specific controls (e.g. "Hetero","PROSITE") .
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Asym.Unit (1013 KB)
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