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Asym. Unit
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Asym.Unit (346 KB)
Biol.Unit 1 (340 KB)
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(1)
Title
:
X-RAY CRYSTAL STRUCTURE OF PFA-M1 IN COMPLEX WITH HYDROXAMIC ACID-BASED INHIBITOR 10O
Authors
:
N. Drinkwater, S. Mcgowan
Date
:
20 May 15 (Deposition) - 30 Mar 16 (Release) - 30 Mar 16 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.90
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
M1 Alanyl-Aminopeptidase, Protease, Inhibitor, Hydroxamic Acid, Hydrolase-Hydrolase Inhibitor Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
N. Drinkwater, N. B. Vinh, S. N. Mistry, R. S. Bamert, C. Ruggeri, J. P. Holleran, S. Loganathan, A. Paiardini, S. A. Charman, A. K. Powell, V. M. Avery, S. Mcgowan, P. J. Scammells
Potent Dual Inhibitors Of Plasmodium Falciparum M1 And M17 Aminopeptidases Through Optimization Of S1 Pocket Interactions.
Eur. J. Med. Chem. V. 110 43 2016
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Hetero Components
(6, 10)
Info
All Hetero Components
1a: N-[(1R)-2-(HYDROXYAMINO)-2-OXO-1-(... (4TLa)
2a: DIMETHYL SULFOXIDE (DMSa)
2b: DIMETHYL SULFOXIDE (DMSb)
2c: DIMETHYL SULFOXIDE (DMSc)
3a: GLYCEROL (GOLa)
3b: GLYCEROL (GOLb)
3c: GLYCEROL (GOLc)
4a: MAGNESIUM ION (MGa)
5a: PHOSPHATE ION (PO4a)
6a: ZINC ION (ZNa)
View:
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Label:
No.
Name
Count
Type
Full Name
1
4TL
1
Ligand/Ion
N-[(1R)-2-(HYDROXYAMINO)-2-OXO-1-(3',4',5'-TRIFLUOROBIPHENYL-4-YL)ETHYL]-2,2-DIMETHYLPROPANAMIDE
2
DMS
3
Ligand/Ion
DIMETHYL SULFOXIDE
3
GOL
3
Ligand/Ion
GLYCEROL
4
MG
1
Ligand/Ion
MAGNESIUM ION
5
PO4
1
Ligand/Ion
PHOSPHATE ION
6
ZN
1
Ligand/Ion
ZINC ION
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Sites
(10, 10)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
THR A:305 , GLN A:317 , GLU A:319 , ALA A:320 , ASN A:458 , VAL A:459 , GLY A:460 , ALA A:461 , GLU A:463 , ARG A:489 , HIS A:496 , GLU A:497 , HIS A:500 , GLU A:519 , GLU A:572 , TYR A:575 , TYR A:580 , MET A:1034 , ZN A:1102
binding site for residue 4TL A 1101
02
AC2
SOFTWARE
HIS A:496 , HIS A:500 , GLU A:519 , 4TL A:1101
binding site for residue ZN A 1102
03
AC3
SOFTWARE
HOH A:1331 , HOH A:1423 , HOH A:1502 , HOH A:2012 , HOH A:2122
binding site for residue MG A 1103
04
AC4
SOFTWARE
GLU A:699 , ASN A:700 , TYR A:757
binding site for residue PO4 A 1104
05
AC5
SOFTWARE
ASN A:573 , THR A:576 , THR A:1037 , GLN A:1038 , TYR A:1077 , HOH A:1302 , HOH A:1369 , HOH A:1585
binding site for residue GOL A 1105
06
AC6
SOFTWARE
HIS A:653 , LYS A:676 , TYR A:741 , ASN A:835 , PHE A:836 , HOH A:1290 , HOH A:1405 , HOH A:1440
binding site for residue GOL A 1106
07
AC7
SOFTWARE
TYR A:853 , SER A:903 , TYR A:938 , DMS A:1110 , HOH A:1713 , HOH A:1796
binding site for residue GOL A 1107
08
AC8
SOFTWARE
ASP A:758 , SER A:759 , ALA A:761 , ARG A:764 , HOH A:1803
binding site for residue DMS A 1108
09
AC9
SOFTWARE
SER A:822 , TYR A:823 , SER A:826 , THR A:900
binding site for residue DMS A 1109
10
AD1
SOFTWARE
SER A:826 , TYR A:853 , SER A:903 , GOL A:1107
binding site for residue DMS A 1110
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
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SCOP Domains
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Pfam Domains
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Chain A
Asymmetric Unit 1
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Asym.Unit (346 KB)
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