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4ZWE
Asym. Unit
Info
Asym.Unit (682 KB)
Biol.Unit 1 (671 KB)
Biol.Unit 2 (339 KB)
Biol.Unit 3 (338 KB)
Biol.Unit 4 (339 KB)
Biol.Unit 5 (340 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE DGTP-BOUND CATALYTIC CORE OF SAMHD1 T592V MUTANT
Authors
:
C. Tang, X. Ji, Y. Xiong
Date
:
19 May 15 (Deposition) - 02 Sep 15 (Release) - 11 Nov 15 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.81
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B,C,D (1x)
Biol. Unit 2: A,D (1x)
Biol. Unit 3: A,C (1x)
Biol. Unit 4: B,C (1x)
Biol. Unit 5: B,D (1x)
Keywords
:
Phosphorylation, Tetramer Stability, Dntpase, Hiv-1 Restriction, Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
C. Tang, X. Ji, L. Wu, Y. Xiong
Impaired Dntpase Activity Of Samhd1 By Phosphomimetic Mutation Of Thr-592.
J. Biol. Chem. V. 290 26352 2015
[
close entry info
]
Hetero Components
(2, 17)
Info
All Hetero Components
1a: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE (DGTa)
1b: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE (DGTb)
1c: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE (DGTc)
1d: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE (DGTd)
1e: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE (DGTe)
1f: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE (DGTf)
1g: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE (DGTg)
1h: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE (DGTh)
1i: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE (DGTi)
1j: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE (DGTj)
1k: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE (DGTk)
1l: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE (DGTl)
2a: MAGNESIUM ION (MGa)
2b: MAGNESIUM ION (MGb)
2c: MAGNESIUM ION (MGc)
2d: MAGNESIUM ION (MGd)
2e: MAGNESIUM ION (MGe)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
DGT
12
Ligand/Ion
2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE
2
MG
5
Ligand/Ion
MAGNESIUM ION
[
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]
Sites
(21, 21)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
13: AD4 (SOFTWARE)
14: AD5 (SOFTWARE)
15: AD6 (SOFTWARE)
16: AD7 (SOFTWARE)
17: AD8 (SOFTWARE)
18: AD9 (SOFTWARE)
19: AE1 (SOFTWARE)
20: AE2 (SOFTWARE)
21: AE3 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
GLN A:149 , LEU A:150 , ARG A:164 , ASN A:207 , HIS A:210 , HIS A:215 , HIS A:233 , ASP A:311 , LYS A:312 , TYR A:315 , ASP A:319 , ARG A:366 , HIS A:370 , TYR A:374 , GLN A:375
binding site for residue DGT A 701
02
AC2
SOFTWARE
VAL A:156 , PHE A:157 , ARG A:372 , HIS A:376 , LYS A:377 , VAL A:378 , DGT A:703 , ARG C:333 , ARG C:352 , LYS C:354 , ASN C:358 , LYS C:523 , VAL D:117 , ASN D:119 , MG D:701
binding site for residue DGT A 702
03
AC3
SOFTWARE
TYR A:155 , VAL A:156 , VAL A:378 , ARG A:451 , DGT A:702 , LYS C:523 , LYS D:116 , VAL D:117 , ILE D:118 , ASP D:137 , GLN D:142 , ARG D:145 , PHE D:165 , MG D:701
binding site for residue DGT A 703
04
AC4
SOFTWARE
ARG A:333 , ARG A:352 , LYS A:354 , ASN A:358 , LYS A:523 , VAL B:117 , ASN B:119 , HIS B:125 , MG B:703 , DGT B:704 , VAL C:156 , PHE C:157 , ARG C:372 , HIS C:376 , LYS C:377 , VAL C:378
binding site for residue DGT A 704
05
AC5
SOFTWARE
LYS A:116 , DGT B:705 , DGT D:704
binding site for residue MG A 705
06
AC6
SOFTWARE
GLN B:149 , ARG B:164 , ARG B:206 , HIS B:210 , HIS B:215 , HIS B:233 , ASP B:311 , LYS B:312 , TYR B:315 , ASP B:319 , ARG B:366 , HIS B:370 , TYR B:374 , GLN B:375 , MG B:702
binding site for residue DGT B 701
07
AC7
SOFTWARE
ARG B:206 , LYS B:312 , DGT B:701
binding site for residue MG B 702
08
AC8
SOFTWARE
DGT A:704 , LYS B:116 , DGT B:704
binding site for residue MG B 703
09
AC9
SOFTWARE
LYS A:523 , DGT A:704 , LYS B:116 , VAL B:117 , ILE B:118 , ASP B:137 , GLN B:142 , ARG B:145 , PHE B:165 , MG B:703 , TYR C:155 , VAL C:156 , VAL C:378 , ARG C:451 , LYS C:455
binding site for residue DGT B 704
10
AD1
SOFTWARE
VAL A:117 , ASN A:119 , MG A:705 , ARG B:333 , PHE B:337 , ARG B:352 , LYS B:354 , ASN B:358 , LYS B:523 , VAL D:156 , PHE D:157 , ARG D:372 , HIS D:376 , LYS D:377 , VAL D:378 , DGT D:704
binding site for residue DGT B 705
11
AD2
SOFTWARE
LYS C:116 , DGT C:702 , DGT D:702
binding site for residue MG C 701
12
AD3
SOFTWARE
TYR B:155 , VAL B:156 , VAL B:378 , ARG B:451 , LYS C:116 , VAL C:117 , ILE C:118 , ASP C:137 , GLN C:142 , ARG C:145 , PHE C:165 , MG C:701 , LYS D:523 , DGT D:702
binding site for residue DGT C 702
13
AD4
SOFTWARE
GLN C:149 , LEU C:150 , ARG C:164 , ASN C:207 , HIS C:210 , HIS C:215 , HIS C:233 , ASP C:311 , LYS C:312 , TYR C:315 , ASP C:319 , ARG C:366 , HIS C:370 , TYR C:374 , GLN C:375
binding site for residue DGT C 703
14
AD5
SOFTWARE
DGT A:702 , DGT A:703 , LYS D:116
binding site for residue MG D 701
15
AD6
SOFTWARE
VAL B:156 , PHE B:157 , ARG B:372 , HIS B:376 , LYS B:377 , VAL C:117 , ASN C:119 , HIS C:125 , MG C:701 , DGT C:702 , ARG D:333 , ARG D:352 , LYS D:354 , ASN D:358 , LYS D:523
binding site for residue DGT D 702
16
AD7
SOFTWARE
GLN D:149 , LEU D:150 , GLY D:151 , ARG D:164 , ARG D:206 , ASN D:207 , HIS D:210 , PHE D:213 , HIS D:215 , HIS D:233 , ASP D:311 , LYS D:312 , TYR D:315 , ASP D:319 , ARG D:366 , HIS D:370 , TYR D:374 , GLN D:375
binding site for residue DGT D 703
17
AD8
SOFTWARE
LYS A:116 , VAL A:117 , ILE A:118 , ILE A:136 , ASP A:137 , GLN A:142 , ARG A:145 , PHE A:165 , MG A:705 , LYS B:523 , DGT B:705 , TYR D:155 , VAL D:156 , VAL D:378 , ARG D:451 , LYS D:455
binding site for residue DGT D 704
18
AD9
SOFTWARE
ASN B:328 , HIS B:364 , ARG B:372 , ASN D:327 , PHE D:329 , ASP D:361 , THR D:365
binding site for Ligand ASN D 328 bound to ASN B 328
19
AE1
SOFTWARE
GLN D:461 , PRO D:462 , ILE D:468 , ILE D:503 , ASN D:504 , GLU D:547 , LEU D:549
binding site for Ligand GLN D 548 bound to ASN D 504
20
AE2
SOFTWARE
HIS B:167 , ALA B:202 , LEU B:204 , CYS B:205 , ASN B:207 , LEU B:208 , SER B:237 , SER B:302 , ASP B:309 , VAL B:310 , LYS B:312 , TRP B:313 , ASP B:314 , TYR B:315 , DGT B:701 , MG B:702
binding site for Di-peptide ARG B 206 and ASP B 311
21
AE3
SOFTWARE
ILE B:468 , ARG B:470 , GLU B:471 , TYR B:473 , GLU B:474 , SER B:475 , LEU B:476 , GLU C:597
binding site for Di-peptide LYS B 469 and ASP B 472
[
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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Exons
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Asym.Unit (682 KB)
Header - Asym.Unit
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