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4ZHK
Asym. Unit
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Asym.Unit (189 KB)
Biol.Unit 1 (183 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF RPE65 IN COMPLEX WITH MB-002
Authors
:
P. D. Kiser, K. Palczewski
Date
:
25 Apr 15 (Deposition) - 27 May 15 (Release) - 27 May 15 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.09
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
7-Bladed Beta Propeller, Monotopic Membrane Protein, Non-Heme Iron Protein, Retinoid Isomerase, Smooth Endoplasmic Reticulum, Isomerase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
P. D. Kiser, K. Palczewski
Crystal Structure Of Rpe65 In Complex With Mb-002
To Be Published
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close entry info
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Hetero Components
(7, 15)
Info
All Hetero Components
1a: (1S)-1-[3-(CYCLOHEXYLMETHOXY)PHENY... (A8Va)
1b: (1S)-1-[3-(CYCLOHEXYLMETHOXY)PHENY... (A8Vb)
2a: (1R)-1-[3-(CYCLOHEXYLMETHOXY)PHENY... (A9Va)
2b: (1R)-1-[3-(CYCLOHEXYLMETHOXY)PHENY... (A9Vb)
3a: ACETYL GROUP (ACEa)
3b: ACETYL GROUP (ACEb)
4a: FE (II) ION (FE2a)
4b: FE (II) ION (FE2b)
5a: SODIUM ION (NAa)
5b: SODIUM ION (NAb)
6a: TETRAETHYLENE GLYCOL (PG4a)
6b: TETRAETHYLENE GLYCOL (PG4b)
7a: TRIETHYLENE GLYCOL (PGEa)
7b: TRIETHYLENE GLYCOL (PGEb)
7c: TRIETHYLENE GLYCOL (PGEc)
View:
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Label:
No.
Name
Count
Type
Full Name
1
A8V
2
Ligand/Ion
(1S)-1-[3-(CYCLOHEXYLMETHOXY)PHENYL]PROPANE-1,3-DIOL
2
A9V
2
Ligand/Ion
(1R)-1-[3-(CYCLOHEXYLMETHOXY)PHENYL]PROPANE-1,3-DIOL
3
ACE
2
Mod. Amino Acid
ACETYL GROUP
4
FE2
2
Ligand/Ion
FE (II) ION
5
NA
2
Ligand/Ion
SODIUM ION
6
PG4
2
Ligand/Ion
TETRAETHYLENE GLYCOL
7
PGE
3
Ligand/Ion
TRIETHYLENE GLYCOL
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Sites
(13, 13)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
13: AD4 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
HIS A:180 , HIS A:241 , HIS A:313 , HIS A:527 , A9V A:607
binding site for residue FE2 A 601
02
AC2
SOFTWARE
GLN A:4 , VAL A:459 , TRP A:460 , GLN A:461 , PRO A:463 , NA A:603
binding site for residue PG4 A 602
03
AC3
SOFTWARE
GLN A:461 , PG4 A:602 , HOH A:940
binding site for residue NA A 603
04
AC4
SOFTWARE
ASP A:320 , TYR A:431 , THR A:432 , LYS A:453
binding site for residue PGE A 604
05
AC5
SOFTWARE
GLY A:484 , ASN A:506 , HOH A:807
binding site for residue PGE A 605
06
AC6
SOFTWARE
PHE A:61 , PHE A:103 , VAL A:134 , THR A:147 , GLU A:148 , ASN A:175 , ASN A:194 , TYR A:239 , HIS A:241 , TYR A:275 , TYR A:338
binding site for residue A8V A 606
07
AC7
SOFTWARE
LEU A:60 , HIS A:241 , PHE A:312 , TYR A:338 , GLU A:417 , PHE A:418 , PHE A:442 , VAL A:524 , HIS A:527 , FE2 A:601
binding site for residue A9V A 607
08
AC8
SOFTWARE
HIS B:180 , HIS B:241 , HIS B:313 , HIS B:527 , A9V B:606
binding site for residue FE2 B 601
09
AC9
SOFTWARE
GLN B:4 , VAL B:459 , TRP B:460 , GLN B:461 , PRO B:463 , NA B:603
binding site for residue PG4 B 602
10
AD1
SOFTWARE
GLN B:461 , PG4 B:602 , HOH B:958
binding site for residue NA B 603
11
AD2
SOFTWARE
TYR B:318 , ASP B:320 , PRO B:430 , TYR B:431 , LYS B:453 , HOH B:702
binding site for residue PGE B 604
12
AD3
SOFTWARE
PHE B:61 , PHE B:103 , VAL B:134 , THR B:147 , GLU B:148 , ASN B:175 , ASN B:194 , TYR B:239 , HIS B:241 , TYR B:275 , TYR B:338
binding site for residue A8V B 605
13
AD4
SOFTWARE
LEU B:60 , PHE B:61 , HIS B:241 , HIS B:313 , TYR B:338 , GLU B:417 , PHE B:418 , PHE B:442 , VAL B:524 , HIS B:527 , FE2 B:601
binding site for residue A9V B 606
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
(0, 0)
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SCOP Domains
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CATH Domains
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (189 KB)
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