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4ZEE
Asym. Unit
Info
Asym.Unit (31 KB)
Biol.Unit 1 (26 KB)
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(1)
Title
:
X-RAY STRUCTURE OF THE BIS-PLATINUM LYSOZYME ADDUCT FORMED IN THE REACTION BETWEEN THE PROTEIN AND THE TWO DRUGS CISPLATIN AND OXALIPLATIN (PREPARATION 2)
Authors
:
A. Merlino
Date
:
20 Apr 15 (Deposition) - 27 May 15 (Release) - 10 Jun 15 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.95
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Ciapltin, Oxaliplatin, Platin Based Drugs, Cancer, Hydrolase
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
D. Marasco, L. Messori, T. Marzo, A. Merlino
Oxaliplatin Vs. Cisplatin: Competition Experiments On Their Binding To Lysozyme.
Dalton Trans V. 44 10392 2015
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Hetero Components
(4, 13)
Info
All Hetero Components
1a: CYCLOHEXANE-1(R),2(R)-DIAMINE-PLAT... (1PTa)
2a: CISPLATIN (CPTa)
3a: 1,2-ETHANEDIOL (EDOa)
3b: 1,2-ETHANEDIOL (EDOb)
4a: NITRATE ION (NO3a)
4b: NITRATE ION (NO3b)
4c: NITRATE ION (NO3c)
4d: NITRATE ION (NO3d)
4e: NITRATE ION (NO3e)
4f: NITRATE ION (NO3f)
4g: NITRATE ION (NO3g)
4h: NITRATE ION (NO3h)
4i: NITRATE ION (NO3i)
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No.
Name
Count
Type
Full Name
1
1PT
1
Ligand/Ion
CYCLOHEXANE-1(R),2(R)-DIAMINE-PLATINUM(II)
2
CPT
1
Ligand/Ion
CISPLATIN
3
EDO
2
Ligand/Ion
1,2-ETHANEDIOL
4
NO3
9
Ligand/Ion
NITRATE ION
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Sites
(13, 13)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
13: AD4 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
SER A:24 , LEU A:25 , GLY A:26 , GLN A:121 , ILE A:124 , HOH A:520
binding site for residue NO3 A 401
02
AC2
SOFTWARE
ALA A:11 , ARG A:14 , HIS A:15 , SER A:86 , ASP A:87 , ILE A:88 , HOH A:521
binding site for residue NO3 A 402
03
AC3
SOFTWARE
ASN A:59 , TRP A:63 , EDO A:411 , 1PT A:412
binding site for residue NO3 A 403
04
AC4
SOFTWARE
ARG A:5 , LYS A:33 , PHE A:38 , TRP A:123 , EDO A:410
binding site for residue NO3 A 404
05
AC5
SOFTWARE
CYS A:64 , ASN A:65 , ASP A:66 , GLY A:67 , ARG A:68 , THR A:69 , SER A:72 , HOH A:502 , HOH A:530
binding site for residue NO3 A 405
06
AC6
SOFTWARE
VAL A:99 , SER A:100 , GLY A:102 , ASN A:103 , GLY A:104 , HOH A:504
binding site for residue NO3 A 406
07
AC7
SOFTWARE
ASN A:65 , ASN A:74 , ASN A:77 , ILE A:78 , PRO A:79
binding site for residue NO3 A 407
08
AC8
SOFTWARE
GLU A:35 , ASP A:52 , GLN A:57 , ALA A:107 , TRP A:108 , VAL A:109 , ALA A:110 , EDO A:411 , HOH A:514 , HOH A:576
binding site for residue NO3 A 408
09
AC9
SOFTWARE
ALA A:10 , ALA A:11 , ARG A:14 , HOH A:518
binding site for residue NO3 A 409
10
AD1
SOFTWARE
ALA A:122 , TRP A:123 , NO3 A:404
binding site for residue EDO A 410
11
AD2
SOFTWARE
GLN A:57 , ILE A:58 , ASN A:59 , ALA A:107 , NO3 A:403 , NO3 A:408
binding site for residue EDO A 411
12
AD3
SOFTWARE
ASP A:119 , NO3 A:403 , HOH A:505
binding site for residue 1PT A 412
13
AD4
SOFTWARE
HIS A:15 , ASN A:93
binding site for residue CPT A 413
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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Exons
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Asymmetric Unit 1
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