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4Z61
Asym. Unit
Info
Asym.Unit (264 KB)
Biol.Unit 1 (132 KB)
Biol.Unit 2 (129 KB)
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(1)
Title
:
THE PLANT PEPTIDE HORMONE RECEPTOR COMPLEX
Authors
:
J. Chai, J. Wang
Date
:
03 Apr 15 (Deposition) - 02 Mar 16 (Release) - 02 Mar 16 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.75
Chains
:
Asym. Unit : A,B,C,D,P,Q
Biol. Unit 1: A,C,Q (1x)
Biol. Unit 2: B,D,P (1x)
Keywords
:
Hormone Receptor, Complex, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. Wang, H. Li, Z. Han, H. Zhang, T. Wang, G. Lin, J. Chang, W. Yang, J. Cha
Allosteric Receptor Activation By The Plant Peptide Hormone Phytosulfokine
Nature V. 525 265 2015
[
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]
Hetero Components
(2, 21)
Info
All Hetero Components
1a: N-ACETYL-D-GLUCOSAMINE (NAGa)
1b: N-ACETYL-D-GLUCOSAMINE (NAGb)
1c: N-ACETYL-D-GLUCOSAMINE (NAGc)
1d: N-ACETYL-D-GLUCOSAMINE (NAGd)
1e: N-ACETYL-D-GLUCOSAMINE (NAGe)
1f: N-ACETYL-D-GLUCOSAMINE (NAGf)
1g: N-ACETYL-D-GLUCOSAMINE (NAGg)
1h: N-ACETYL-D-GLUCOSAMINE (NAGh)
1i: N-ACETYL-D-GLUCOSAMINE (NAGi)
1j: N-ACETYL-D-GLUCOSAMINE (NAGj)
1k: N-ACETYL-D-GLUCOSAMINE (NAGk)
1l: N-ACETYL-D-GLUCOSAMINE (NAGl)
1m: N-ACETYL-D-GLUCOSAMINE (NAGm)
1n: N-ACETYL-D-GLUCOSAMINE (NAGn)
1o: N-ACETYL-D-GLUCOSAMINE (NAGo)
1p: N-ACETYL-D-GLUCOSAMINE (NAGp)
1q: N-ACETYL-D-GLUCOSAMINE (NAGq)
2a: O-SULFO-L-TYROSINE (TYSa)
2b: O-SULFO-L-TYROSINE (TYSb)
2c: O-SULFO-L-TYROSINE (TYSc)
2d: O-SULFO-L-TYROSINE (TYSd)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
NAG
17
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
2
TYS
4
Mod. Amino Acid
O-SULFO-L-TYROSINE
[
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Sites
(23, 23)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
13: AD4 (SOFTWARE)
14: AD5 (SOFTWARE)
15: AD6 (SOFTWARE)
16: AD7 (SOFTWARE)
17: AD8 (SOFTWARE)
18: AD9 (SOFTWARE)
19: AE1 (SOFTWARE)
20: AE2 (SOFTWARE)
21: AE3 (SOFTWARE)
22: AE4 (SOFTWARE)
23: AE5 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
GLN B:436 , TRP B:458 , ASN B:482
binding site for residue NAG B 706
02
AC2
SOFTWARE
ASN A:116 , THR A:118 , VAL A:138 , ASP A:140 , HOH A:804
binding site for Mono-Saccharide NAG A 701 bound to ASN A 116
03
AC3
SOFTWARE
ASN A:179 , GLY A:201 , ASN A:204 , GLN A:423
binding site for Mono-Saccharide NAG A 702 bound to ASN A 204
04
AC4
SOFTWARE
SER A:206 , ASN A:231 , HOH A:868 , NAG C:301
binding site for Mono-Saccharide NAG A 703 bound to ASN A 231
05
AC5
SOFTWARE
SER A:287 , ARG A:310 , ASN A:311 , HOH A:835
binding site for Mono-Saccharide NAG A 704 bound to ASN A 311
06
AC6
SOFTWARE
ASN A:300 , TYR A:319 , ASN A:321 , HOH A:802 , HOH A:815 , HOH A:847
binding site for Mono-Saccharide NAG A 705 bound to ASN A 321
07
AC7
SOFTWARE
ARG A:302 , SER A:303 , SER A:305 , ASN A:327 , HOH A:811 , SER C:191
binding site for Mono-Saccharide NAG A 706 bound to ASN A 327
08
AC8
SOFTWARE
LYS A:359 , LYS A:361 , ASN A:383 , HOH A:831
binding site for Mono-Saccharide NAG A 707 bound to ASN A 383
09
AC9
SOFTWARE
TRP A:458 , ASN A:482 , TYR A:542 , HOH A:822
binding site for Mono-Saccharide NAG A 708 bound to ASN A 482
10
AD1
SOFTWARE
ASN A:632 , HOH A:826 , HOH A:882
binding site for Mono-Saccharide NAG A 709 bound to ASN A 632
11
AD2
SOFTWARE
ARG B:95 , ASN B:116 , VAL B:138 , ASP B:140
binding site for Mono-Saccharide NAG B 701 bound to ASN B 116
12
AD3
SOFTWARE
SER B:287 , ASN B:288 , ARG B:310 , ASN B:311
binding site for Mono-Saccharide NAG B 702 bound to ASN B 311
13
AD4
SOFTWARE
ASN B:300 , ARG B:302 , TYR B:319 , ASN B:321 , SER B:323 , ALA B:324
binding site for Mono-Saccharide NAG B 703 bound to ASN B 321
14
AD5
SOFTWARE
LYS B:359 , LYS B:361 , ASN B:383 , LEU B:409 , TYS P:30 , THR P:31
binding site for Mono-Saccharide NAG B 704 bound to ASN B 383
15
AD6
SOFTWARE
GLN B:365 , ASN B:388 , SER B:391 , HOH B:802 , HOH B:806
binding site for Mono-Saccharide NAG B 705 bound to ASN B 388
16
AD7
SOFTWARE
ASN A:255 , LYS A:279 , NAG A:703 , THR C:165 , ASN C:166 , ASN C:187
binding site for Mono-Saccharide NAG C 301 bound to ASN C 187
17
AD8
SOFTWARE
LEU D:129 , ASN D:153 , ASN D:177 , HOH D:1615
binding site for Mono-Saccharide NAG D 1501 bound to ASN D 153
18
AD9
SOFTWARE
THR B:408 , LEU B:409 , ILE B:431 , SER B:434 , ASP B:455 , SER B:457 , TRP B:458 , PHE B:515 , PHE B:516 , LYS B:517 , LYS B:518 , PHE B:534 , TYS P:30
binding site for Di-peptide TYS P 28 and ILE P 29
19
AE1
SOFTWARE
SER B:382 , THR B:408 , ILE B:431 , ASP B:455 , PHE B:515 , PHE B:516 , LYS B:518 , GLY B:525 , PHE B:534 , NAG B:704 , TYS P:28 , THR P:31
binding site for Di-peptide ILE P 29 and TYS P 30
20
AE2
SOFTWARE
ASN B:356 , ALA B:358 , SER B:380 , SER B:382 , PRO B:514 , PHE B:515 , PHE B:516 , LYS B:518 , GLY B:525 , NAG B:704 , ILE P:29 , GLN P:32
binding site for Di-peptide TYS P 30 and THR P 31
21
AE3
SOFTWARE
THR A:408 , ILE A:431 , ALA A:433 , SER A:434 , ASP A:455 , SER A:457 , TRP A:458 , PHE A:516 , LYS A:518 , HOH A:875 , TYS Q:30
binding site for Di-peptide TYS Q 28 and ILE Q 29
22
AE4
SOFTWARE
SER A:382 , THR A:408 , ILE A:431 , ASP A:455 , PHE A:515 , PHE A:516 , LYS A:518 , GLY A:525 , TYS Q:28 , THR Q:31
binding site for Di-peptide ILE Q 29 and TYS Q 30
23
AE5
SOFTWARE
ASN A:356 , ALA A:358 , SER A:380 , SER A:382 , PRO A:514 , PHE A:515 , PHE A:516 , LYS A:518 , GLY A:525 , HOH A:831 , ILE Q:29 , GLN Q:32
binding site for Di-peptide TYS Q 30 and THR Q 31
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
Info
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Exons
(0, 0)
Info
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(0, 0)
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CATH Domains
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Pfam Domains
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Asymmetric Unit 1
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select :A, :C
select chains 'A' and 'C'
select [ALA]:A
select all 'ALA' residues (Alanines) in chain 'A'
select 5-10
select residue range 5 to 10 in all chains
select 5-10:A
select residue range 5 to 10 in chain 'A'
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select non-helix/non-sheet protein parts
set fontsize 20
set label size to 20 (allowed range: 1-58)
ssbonds 100
show SS bonds with a radius of 100 units (=0.4Å)
wireframe 100
show bonds with a radius of 100 units (=0.4Å)
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Asym.Unit (264 KB)
Header - Asym.Unit
Biol.Unit 1 (132 KB)
Header - Biol.Unit 1
Biol.Unit 2 (129 KB)
Header - Biol.Unit 2
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