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4Z05
Asym. Unit
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Asym.Unit (86 KB)
Biol.Unit 1 (43 KB)
Biol.Unit 2 (40 KB)
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(1)
Title
:
C. BESCII FAMILY 3 PECTATE LYASE MUTANT E84A
Authors
:
P. M. Alahuhta, V. V. Lunin
Date
:
25 Mar 15 (Deposition) - 23 Dec 15 (Release) - 23 Dec 15 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.50
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Pl3, Parallel Beta-Helix, Lyase
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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)
Reference
:
M. Alahuhta, L. E. Taylor, R. Brunecky, D. W. Sammond, W. Michener, M. W. Adams, M. E. Himmel, Y. J. Bomble, V. Lunin
The Catalytic Mechanism And Unique Low Ph Optimum Of Caldicellulosiruptor Bescii Family 3 Pectate Lyase.
Acta Crystallogr. , Sect. D V. 71 1946 2015
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Hetero Components
(4, 14)
Info
All Hetero Components
1a: CALCIUM ION (CAa)
1b: CALCIUM ION (CAb)
1c: CALCIUM ION (CAc)
1d: CALCIUM ION (CAd)
2a: CHLORIDE ION (CLa)
3a: (4S)-2-METHYL-2,4-PENTANEDIOL (MPDa)
3b: (4S)-2-METHYL-2,4-PENTANEDIOL (MPDb)
3c: (4S)-2-METHYL-2,4-PENTANEDIOL (MPDc)
3d: (4S)-2-METHYL-2,4-PENTANEDIOL (MPDd)
3e: (4S)-2-METHYL-2,4-PENTANEDIOL (MPDe)
3f: (4S)-2-METHYL-2,4-PENTANEDIOL (MPDf)
4a: (4R)-2-METHYLPENTANE-2,4-DIOL (MRDa)
4b: (4R)-2-METHYLPENTANE-2,4-DIOL (MRDb)
4c: (4R)-2-METHYLPENTANE-2,4-DIOL (MRDc)
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No.
Name
Count
Type
Full Name
1
CA
4
Ligand/Ion
CALCIUM ION
2
CL
1
Ligand/Ion
CHLORIDE ION
3
MPD
6
Ligand/Ion
(4S)-2-METHYL-2,4-PENTANEDIOL
4
MRD
3
Ligand/Ion
(4R)-2-METHYLPENTANE-2,4-DIOL
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Sites
(14, 14)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
13: AD4 (SOFTWARE)
14: AD5 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ASP A:81 , VAL A:82 , GLU A:104 , HOH A:366 , HOH A:383 , HOH A:403 , HOH A:497
binding site for residue CA A 201
02
AC2
SOFTWARE
ASP A:64 , ASP A:85 , HOH A:343 , HOH A:345 , HOH A:388 , HOH A:504
binding site for residue CA A 202
03
AC3
SOFTWARE
GLU A:39 , ASN A:40 , LYS A:90 , ASN A:113
binding site for residue CL A 203
04
AC4
SOFTWARE
ASP A:81 , PRO A:115 , CYS A:116 , THR A:117 , LYS A:141 , VAL A:143 , HOH A:408 , HOH A:428 , HOH A:469
binding site for residue MPD A 204
05
AC5
SOFTWARE
LEU A:6 , ILE A:12 , TYR A:20 , HOH A:418 , THR B:0 , ASN B:1 , GLY B:4
binding site for residue MPD A 205
06
AC6
SOFTWARE
ASN A:72 , VAL A:73 , VAL A:94 , GLU A:96
binding site for residue MPD A 206
07
AC7
SOFTWARE
ASN A:1 , TYR A:20 , HOH A:373 , MRD B:204 , HOH B:477
binding site for residue MPD A 207
08
AC8
SOFTWARE
HIS A:171 , GLN A:192 , TYR A:193 , HOH A:329 , GLU B:147 , VAL B:165 , TYR B:193
binding site for residue MPD A 208
09
AC9
SOFTWARE
ASN A:122 , ASP A:148 , ASN A:172 , HOH A:347 , THR B:139 , HOH B:445 , HOH B:479
binding site for residue MRD A 209
10
AD1
SOFTWARE
LYS A:49 , HOH A:319 , HOH A:331 , GLN B:30
binding site for residue MRD A 210
11
AD2
SOFTWARE
ASP B:64 , ASP B:85 , HOH B:311 , HOH B:317 , HOH B:402 , HOH B:414
binding site for residue CA B 201
12
AD3
SOFTWARE
ASP B:81 , VAL B:82 , GLU B:104 , HOH B:353 , HOH B:379 , HOH B:392 , HOH B:465
binding site for residue CA B 202
13
AD4
SOFTWARE
THR B:117 , LYS B:119 , TYR B:145 , GLU B:147 , SER B:186 , SER B:188 , GLN B:189 , HOH B:340
binding site for residue MPD B 203
14
AD5
SOFTWARE
THR A:0 , ASN A:1 , GLY A:4 , MPD A:207 , LEU B:6 , ILE B:8 , ILE B:12 , TYR B:20 , HOH B:344
binding site for residue MRD B 204
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
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Exons
(0, 0)
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SCOP Domains
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CATH Domains
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (86 KB)
Header - Asym.Unit
Biol.Unit 1 (43 KB)
Header - Biol.Unit 1
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