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Biol. Unit 1
Info
Asym.Unit (89 KB)
Biol.Unit 1 (43 KB)
Biol.Unit 2 (42 KB)
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(1)
Title
:
C. BESCII FAMILY 3 PECTATE LYASE DOUBLE MUTANT K108A/Q111N IN COMPLEX WITH TRIGALACTURONIC ACID
Authors
:
P. M. Alahuhta, V. V. Lunin
Date
:
25 Mar 15 (Deposition) - 23 Dec 15 (Release) - 23 Dec 15 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.48
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Pl3, Parallel Beta-Helix, Lyase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. Alahuhta, L. E. Taylor, R. Brunecky, D. W. Sammond, W. Michener, M. W. Adams, M. E. Himmel, Y. J. Bomble, V. Lunin
The Catalytic Mechanism And Unique Low Ph Optimum Of Caldicellulosiruptor Bescii Family 3 Pectate Lyase.
Acta Crystallogr. , Sect. D V. 71 1946 2015
[
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Hetero Components
(3, 9)
Info
All Hetero Components
1a: ALPHA-D-GALACTOPYRANURONIC ACID (ADAa)
1b: ALPHA-D-GALACTOPYRANURONIC ACID (ADAb)
1c: ALPHA-D-GALACTOPYRANURONIC ACID (ADAc)
1d: ALPHA-D-GALACTOPYRANURONIC ACID (ADAd)
1e: ALPHA-D-GALACTOPYRANURONIC ACID (ADAe)
1f: ALPHA-D-GALACTOPYRANURONIC ACID (ADAf)
1g: ALPHA-D-GALACTOPYRANURONIC ACID (ADAg)
1h: ALPHA-D-GALACTOPYRANURONIC ACID (ADAh)
1i: ALPHA-D-GALACTOPYRANURONIC ACID (ADAi)
1j: ALPHA-D-GALACTOPYRANURONIC ACID (ADAj)
2a: CALCIUM ION (CAa)
2b: CALCIUM ION (CAb)
2c: CALCIUM ION (CAc)
2d: CALCIUM ION (CAd)
2e: CALCIUM ION (CAe)
2f: CALCIUM ION (CAf)
2g: CALCIUM ION (CAg)
2h: CALCIUM ION (CAh)
3a: BETA-D-GALACTOPYRANURONIC ACID (GTRa)
3b: BETA-D-GALACTOPYRANURONIC ACID (GTRb)
4a: (4S)-2-METHYL-2,4-PENTANEDIOL (MPDa)
4b: (4S)-2-METHYL-2,4-PENTANEDIOL (MPDb)
4c: (4S)-2-METHYL-2,4-PENTANEDIOL (MPDc)
4d: (4S)-2-METHYL-2,4-PENTANEDIOL (MPDd)
4e: (4S)-2-METHYL-2,4-PENTANEDIOL (MPDe)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ADA
5
Ligand/Ion
ALPHA-D-GALACTOPYRANURONIC ACID
2
CA
-1
Ligand/Ion
CALCIUM ION
3
GTR
1
Ligand/Ion
BETA-D-GALACTOPYRANURONIC ACID
4
MPD
3
Ligand/Ion
(4S)-2-METHYL-2,4-PENTANEDIOL
[
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Sites
(16, 16)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD6 (SOFTWARE)
12: AD8 (SOFTWARE)
13: AD9 (SOFTWARE)
14: AE1 (SOFTWARE)
15: AE2 (SOFTWARE)
16: AE3 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
GLN A:37 , GLU A:84 , ASP A:107 , CA A:202 , ADA A:209 , ADA A:212 , HOH A:378 , HOH A:385 , HOH A:402
binding site for residue CA A 201
02
AC2
SOFTWARE
GLU A:39 , GLU A:84 , CA A:201 , ADA A:209 , ADA A:210 , ADA A:212 , ADA A:213 , HOH A:362
binding site for residue CA A 202
03
AC3
SOFTWARE
ASP A:64 , GLU A:84 , ASP A:85 , ADA A:210 , ADA A:213 , HOH A:342 , HOH A:424
binding site for residue CA A 203
04
AC4
SOFTWARE
ASP A:81 , VAL A:82 , GLU A:104 , HOH A:341 , HOH A:354 , HOH A:357 , HOH A:476
binding site for residue CA A 204
05
AC5
SOFTWARE
LYS A:119 , GLU A:147 , SER A:186 , TYR A:193
binding site for residue MPD A 205
06
AC6
SOFTWARE
THR A:0 , ASN A:1 , LEU B:6 , ILE B:12 , TYR B:20 , HOH B:429
binding site for residue MPD A 206
07
AC7
SOFTWARE
LEU A:6 , ILE A:8 , ILE A:12 , TYR A:20 , HOH A:420 , ASN B:1
binding site for residue MPD A 207
08
AC8
SOFTWARE
LYS A:54 , ASP A:107 , LYS A:130 , ARG A:133 , LYS A:160 , ADA A:208 , ADA A:209 , ADA A:212 , HOH A:305 , HOH A:358 , HOH A:402 , HOH A:437 , HOH A:446
binding site for residue GTR A 211
09
AC9
SOFTWARE
GLU A:39 , GLU A:84 , ASP A:107 , ASN A:111 , ARG A:133 , ASN A:135 , GLY A:136 , CA A:201 , CA A:202 , ADA A:208 , ADA A:209 , ADA A:210 , GTR A:211 , ADA A:213 , HOH A:305 , HOH A:362 , HOH A:375 , HOH A:385 , HOH A:411
binding site for residue ADA A 212
10
AD1
SOFTWARE
GLU A:39 , GLU A:84 , ASP A:85 , ASN A:113 , ASN A:135 , CA A:202 , CA A:203 , ADA A:209 , ADA A:210 , ADA A:212 , HOH A:310 , HOH A:330 , HOH A:342 , HOH A:362 , HOH A:424
binding site for residue ADA A 213
11
AD6
SOFTWARE
ASN A:137 , THR A:139 , HOH A:454 , LYS B:121 , ASP B:148 , ASN B:172 , HOH B:375
binding site for residue MPD B 205
12
AD8
SOFTWARE
LYS A:103 , ASP B:107 , LYS B:130 , ARG B:133 , LYS B:160 , ADA B:207 , ADA B:208 , ADA B:211 , HOH B:304 , HOH B:305 , HOH B:308 , HOH B:382 , HOH B:451
binding site for residue GTR B 210
13
AD9
SOFTWARE
LYS A:103 , GLU B:39 , GLU B:84 , ASP B:107 , ASN B:111 , ARG B:133 , ASN B:135 , GLY B:136 , CA B:201 , CA B:202 , ADA B:207 , ADA B:208 , ADA B:209 , GTR B:210 , ADA B:212 , HOH B:330 , HOH B:350 , HOH B:371 , HOH B:389 , HOH B:409 , HOH B:430
binding site for residue ADA B 211
14
AE1
SOFTWARE
HOH A:389 , GLU B:39 , GLU B:84 , ASP B:85 , ASN B:113 , ASN B:135 , CA B:202 , CA B:203 , ADA B:208 , ADA B:209 , ADA B:211 , HOH B:307 , HOH B:313 , HOH B:315 , HOH B:319 , HOH B:377 , HOH B:415 , HOH B:430 , HOH B:436
binding site for residue ADA B 212
15
AE2
SOFTWARE
GLU A:39 , LYS A:54 , GLU A:84 , ASP A:85 , ASP A:107 , ASN A:111 , ASN A:113 , LYS A:130 , ARG A:133 , ASN A:135 , GLY A:136 , LYS A:160 , CA A:201 , CA A:202 , CA A:203 , GTR A:211 , ADA A:212 , ADA A:213 , HOH A:305 , HOH A:310 , HOH A:330 , HOH A:342 , HOH A:355 , HOH A:358 , HOH A:362 , HOH A:375 , HOH A:385 , HOH A:402 , HOH A:411 , HOH A:424 , HOH A:446
binding site for Poly-Saccharide residues ADA A 208 through ADA A 210
16
AE3
SOFTWARE
LEU A:6 , ILE A:8 , ILE A:12 , TYR A:20 , GLU A:39 , LYS A:54 , GLU A:84 , ASP A:85 , LYS A:103 , ASP A:107 , ASN A:111 , ASN A:113 , LYS A:130 , ARG A:133 , ASN A:135 , GLY A:136 , LYS A:160 , CA A:201 , CA A:202 , CA A:203 , GTR A:211 , ADA A:212 , ADA A:213 , HOH A:305 , HOH A:310 , HOH A:330 , HOH A:342 , HOH A:355 , HOH A:358 , HOH A:362 , HOH A:375 , HOH A:385 , HOH A:389 , HOH A:402 , HOH A:411 , HOH A:420 , HOH A:424 , HOH A:446 , ASN B:1 , GLU B:39 , GLU B:84 , ASP B:85 , ASP B:107 , ASN B:111 , ASN B:113 , LYS B:130 , ARG B:133 , ASN B:135 , GLY B:136 , LYS B:160 , CA B:201 , CA B:202 , CA B:203 , ADA B:211 , ADA B:212 , HOH B:304 , HOH B:305 , HOH B:307 , HOH B:308 , HOH B:313 , HOH B:315 , HOH B:319 , HOH B:330 , HOH B:377 , HOH B:382 , HOH B:393 , HOH B:409 , HOH B:415 , HOH B:422 , HOH B:430 , HOH B:451
binding site for Poly-Saccharide residues ADA B 207 through ADA B 209
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SAPs(SNPs)/Variants
(0, 0)
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Exons
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Asymmetric Unit 1
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