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4YZ2
Asym. Unit
Info
Asym.Unit (444 KB)
Biol.Unit 1 (222 KB)
Biol.Unit 2 (221 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF STREPTOCOCCUS PNEUMONIAE NANC, IN COMPLEX WITH 2-DEOXY-2,3-DIDEHYDRO-N-ACETYLNEURAMINIC ACID.
Authors
:
P. Lukacik, C. D. Owen, J. A. Potter, G. L. Taylor, M. A. Walsh
Date
:
24 Mar 15 (Deposition) - 23 Sep 15 (Release) - 25 Nov 15 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.06
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Sialidase, Neuraminidase, Beta-Propeller, Cbm40, Hydrolase
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
C. D. Owen, P. Lukacik, J. A. Potter, O. Sleator, G. L. Taylor, M. A. Wals
Streptococcus Pneumoniae Nanc: Structural Insights Into The Specificity And Mechanism Of A Sialidase That Produces A Sialidase Inhibitor.
J. Biol. Chem. V. 290 27736 2015
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Hetero Components
(2, 12)
Info
All Hetero Components
1a: 2-DEOXY-2,3-DEHYDRO-N-ACETYL-NEURA... (DANa)
1b: 2-DEOXY-2,3-DEHYDRO-N-ACETYL-NEURA... (DANb)
2a: SULFATE ION (SO4a)
2b: SULFATE ION (SO4b)
2c: SULFATE ION (SO4c)
2d: SULFATE ION (SO4d)
2e: SULFATE ION (SO4e)
2f: SULFATE ION (SO4f)
2g: SULFATE ION (SO4g)
2h: SULFATE ION (SO4h)
2i: SULFATE ION (SO4i)
2j: SULFATE ION (SO4j)
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No.
Name
Count
Type
Full Name
1
DAN
2
Ligand/Ion
2-DEOXY-2,3-DEHYDRO-N-ACETYL-NEURAMINIC ACID
2
SO4
10
Ligand/Ion
SULFATE ION
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Sites
(12, 12)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ARG A:290 , ILE A:291 , ARG A:309 , ASP A:315 , ILE A:371 , ASP A:372 , ASP A:388 , PHE A:396 , TYR A:553 , SER A:582 , ARG A:600 , ARG A:662 , TYR A:695 , HOH A:1120 , HOH A:1136 , HOH A:1168 , HOH A:1246 , HOH A:1382 , HOH A:1464
binding site for residue DAN A 1001
02
AC2
SOFTWARE
VAL A:357 , ARG A:360 , ASN A:509 , ASN A:719 , HOH A:1256 , HOH A:1292
binding site for residue SO4 A 1002
03
AC3
SOFTWARE
TYR A:181 , LYS A:182 , HIS A:275
binding site for residue SO4 A 1003
04
AC4
SOFTWARE
TYR A:460 , HIS A:664 , SER A:689 , HOH A:1134 , HOH A:1355 , HOH A:1360
binding site for residue SO4 A 1004
05
AC5
SOFTWARE
ASP A:422 , THR A:423 , ASP A:424 , ASN A:426 , HOH A:1352 , HOH A:1371
binding site for residue SO4 A 1005
06
AC6
SOFTWARE
THR A:241 , ALA A:242 , PHE A:243 , HOH A:1391 , ASN B:441 , ARG B:442
binding site for residue SO4 A 1006
07
AC7
SOFTWARE
ARG B:290 , ILE B:291 , ARG B:309 , ASP B:315 , ASP B:372 , ASP B:388 , PHE B:396 , TYR B:553 , SER B:582 , ARG B:600 , ARG B:662 , TYR B:695 , HOH B:1160 , HOH B:1162 , HOH B:1163 , HOH B:1379
binding site for residue DAN B 1001
08
AC8
SOFTWARE
VAL B:357 , ARG B:360 , ASN B:509 , ASN B:719 , HOH B:1290
binding site for residue SO4 B 1002
09
AC9
SOFTWARE
TYR B:181 , LYS B:182 , HIS B:275
binding site for residue SO4 B 1003
10
AD1
SOFTWARE
TYR B:460 , HIS B:485 , ASN B:657 , HIS B:664 , SER B:689 , HOH B:1172 , HOH B:1330 , HOH B:1382
binding site for residue SO4 B 1004
11
AD2
SOFTWARE
HOH A:1322 , ASP B:422 , THR B:423 , ASP B:424 , ASN B:426 , HOH B:1219
binding site for residue SO4 B 1005
12
AD3
SOFTWARE
ASN A:441 , ARG A:442 , THR B:241 , ALA B:242 , PHE B:243 , HOH B:1411
binding site for residue SO4 B 1006
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SAPs(SNPs)/Variants
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Exons
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Asym.Unit (444 KB)
Header - Asym.Unit
Biol.Unit 1 (222 KB)
Header - Biol.Unit 1
Biol.Unit 2 (221 KB)
Header - Biol.Unit 2
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