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4YXD
Asym. Unit
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Asym.Unit (186 KB)
Biol.Unit 1 (178 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF PORCINE HEART MITOCHONDRIAL COMPLEX II BOUND WITH FLUTOLANIL
Authors
:
S. Harada, T. Shiba, D. Sato, A. Yamamoto, M. Nagahama, A. Yone, D. K. Ina K. Sakamoto, M. Inoue, T. Honma, K. Kita
Date
:
23 Mar 15 (Deposition) - 02 Mar 16 (Release) - 02 Mar 16 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.00
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B,C,D (1x)
Keywords
:
Oxidoreductase, Succinate Dehydrogenase, Complex Ii, Inhibitor, Oxidoreductase-Oxidoreductase Inhibitor Complex
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
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Reference
:
D. K. Inaoka, T. Shiba, D. Sato, E. O. Balogun, T. Sasaki, M. Nagahama, M. Oda, S. Matsuoka, J. Ohmori, T. Honma, M. Inoue, K. Kita, S. Harada
Structural Insights Into The Molecular Design Of Flutolanil Derivatives Targeted For Fumarate Respiration Of Parasite Mitochondria
Int J Mol Sci V. 16 15287 2015
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Hetero Components
(6, 6)
Info
All Hetero Components
1a: FE3-S4 CLUSTER (F3Sa)
2a: FLAVIN-ADENINE DINUCLEOTIDE (FADa)
3a: FE2/S2 (INORGANIC) CLUSTER (FESa)
4a: N-[3-(1-METHYLETHOXY)PHENYL]-2-(TR... (FTNa)
5a: PROTOPORPHYRIN IX CONTAINING FE (HEMa)
6a: IRON/SULFUR CLUSTER (SF4a)
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No.
Name
Count
Type
Full Name
1
F3S
1
Ligand/Ion
FE3-S4 CLUSTER
2
FAD
1
Ligand/Ion
FLAVIN-ADENINE DINUCLEOTIDE
3
FES
1
Ligand/Ion
FE2/S2 (INORGANIC) CLUSTER
4
FTN
1
Ligand/Ion
N-[3-(1-METHYLETHOXY)PHENYL]-2-(TRIFLUOROMETHYL)BENZAMIDE
5
HEM
1
Ligand/Ion
PROTOPORPHYRIN IX CONTAINING FE
6
SF4
1
Ligand/Ion
IRON/SULFUR CLUSTER
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Sites
(6, 6)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
GLY A:26 , ALA A:27 , GLY A:28 , GLY A:29 , ALA A:30 , THR A:49 , LYS A:50 , LEU A:51 , SER A:56 , HIS A:57 , THR A:58 , ALA A:60 , ALA A:61 , GLN A:62 , GLY A:63 , GLY A:64 , TYR A:177 , PHE A:178 , ALA A:179 , ALA A:213 , THR A:214 , GLY A:215 , THR A:225 , ASP A:233 , LEU A:264 , HIS A:365 , TYR A:366 , GLY A:397 , GLU A:398 , ARG A:409 , ALA A:412 , ASN A:413 , SER A:414 , LEU A:415 , LEU A:418
binding site for residue FAD A 700
2
AC2
SOFTWARE
SER B:64 , CYS B:65 , ARG B:66 , CYS B:70 , GLY B:71 , CYS B:73 , CYS B:85
binding site for residue FES B 301
3
AC3
SOFTWARE
CYS B:158 , ILE B:159 , CYS B:161 , CYS B:164 , CYS B:225 , PRO B:226
binding site for residue SF4 B 302
4
AC4
SOFTWARE
CYS B:168 , TYR B:178 , CYS B:215 , HIS B:216 , MET B:219 , ASN B:220 , CYS B:221
binding site for residue F3S B 303
5
AC5
SOFTWARE
HIS C:45 , ARG C:46 , GLY C:49 , LEU C:52 , SER C:53 , VAL C:56 , HIS C:101 , THR C:102 , HIS C:108 , ARG D:47 , SER D:50 , LEU D:54 , HIS D:79 , GLY D:83
binding site for residue HEM C 301
6
AC6
SOFTWARE
PRO B:169 , SER B:170 , TRP B:173 , HIS B:216 , ILE C:30 , TRP C:35 , MET C:39 , SER C:42 , ARG C:46 , ASP D:90 , TYR D:91
binding site for residue FTN C 302
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SAPs(SNPs)/Variants
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Exons
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SCOP Domains
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CATH Domains
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Asymmetric Unit 1
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