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4YW5
Asym. Unit
Info
Asym.Unit (445 KB)
Biol.Unit 1 (224 KB)
Biol.Unit 2 (221 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF STREPTOCOCCUS PNEUMONIAE NANC, COMPLEX WITH OSELTAMIVIR CARBOXYLATE
Authors
:
C. D. Owen, P. Lukacik, J. A. Potter, M. Walsh, G. L. Taylor
Date
:
20 Mar 15 (Deposition) - 23 Sep 15 (Release) - 25 Nov 15 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.30
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Sialidase, Neuraminidase, Oseltamivir, Cbm40, Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
C. D. Owen, P. Lukacik, J. A. Potter, O. Sleator, G. L. Taylor, M. A. Wals
Streptococcus Pneumoniae Nanc: Structural Insights Into The Specificity And Mechanism Of A Sialidase That Produces A Sialidase Inhibitor.
J. Biol. Chem. V. 290 27736 2015
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Hetero Components
(3, 12)
Info
All Hetero Components
1a: 1,2-ETHANEDIOL (EDOa)
2a: (3R,4R,5S)-4-(ACETYLAMINO)-5-AMINO... (G39a)
2b: (3R,4R,5S)-4-(ACETYLAMINO)-5-AMINO... (G39b)
3a: GLYCEROL (GOLa)
3b: GLYCEROL (GOLb)
3c: GLYCEROL (GOLc)
3d: GLYCEROL (GOLd)
3e: GLYCEROL (GOLe)
3f: GLYCEROL (GOLf)
3g: GLYCEROL (GOLg)
3h: GLYCEROL (GOLh)
3i: GLYCEROL (GOLi)
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No.
Name
Count
Type
Full Name
1
EDO
1
Ligand/Ion
1,2-ETHANEDIOL
2
G39
2
Ligand/Ion
(3R,4R,5S)-4-(ACETYLAMINO)-5-AMINO-3-(PENTAN-3-YLOXY)CYCLOHEX-1-ENE-1-CARBOXYLIC ACID
3
GOL
9
Ligand/Ion
GLYCEROL
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Sites
(12, 12)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ARG A:290 , ARG A:309 , ASP A:315 , ASP A:372 , PHE A:396 , TYR A:533 , TYR A:553 , SER A:582 , ARG A:600 , ARG A:662 , TYR A:695 , TRP A:716 , GOL A:802 , HOH A:911 , HOH A:917
binding site for residue G39 A 801
02
AC2
SOFTWARE
ASP A:315 , SER A:715 , G39 A:801 , HOH A:903 , HOH A:917 , HOH A:1003
binding site for residue GOL A 802
03
AC3
SOFTWARE
ASP A:449 , ASN A:451 , GLY A:453 , HIS A:485 , ASN A:487 , HOH A:1025
binding site for residue GOL A 803
04
AC4
SOFTWARE
ARG A:173 , SER A:176 , ALA A:205 , ASN A:206 , THR A:208 , LEU A:276 , LYS A:724 , ASN A:725 , VAL A:726
binding site for residue GOL A 804
05
AC5
SOFTWARE
ASP A:315 , PHE A:316 , LEU A:317 , ASN A:318 , GLY A:366 , GLY A:367 , THR A:369 , MET A:390 , PRO A:391 , GLY A:393 , VAL A:394
binding site for residue GOL A 805
06
AC6
SOFTWARE
LYS A:209 , GLU A:212 , GLU A:352 , LYS A:724
binding site for residue GOL A 806
07
AC7
SOFTWARE
PRO A:348 , GLN A:465
binding site for residue EDO A 807
08
AC8
SOFTWARE
ARG B:290 , ASP B:315 , ASP B:372 , TYR B:533 , TYR B:553 , SER B:582 , ARG B:600 , ARG B:662 , TYR B:695 , TRP B:716 , HOH B:921 , HOH B:1015
binding site for residue G39 B 801
09
AC9
SOFTWARE
ARG B:173 , SER B:176 , ALA B:205 , ASN B:206 , THR B:208 , LYS B:724 , ASN B:725 , VAL B:726
binding site for residue GOL B 802
10
AD1
SOFTWARE
LYS B:209 , VAL B:211 , GLU B:212 , GLU B:352 , LYS B:724
binding site for residue GOL B 803
11
AD2
SOFTWARE
ARG B:290 , ASP B:315 , PHE B:316 , SER B:715 , HOH B:921 , HOH B:942 , HOH B:997
binding site for residue GOL B 804
12
AD3
SOFTWARE
ASP B:315 , PHE B:316 , LEU B:317 , ASN B:318 , GLY B:366 , GLY B:367 , PRO B:391 , GLY B:393 , VAL B:394
binding site for residue GOL B 805
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SAPs(SNPs)/Variants
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Exons
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Asym.Unit (445 KB)
Header - Asym.Unit
Biol.Unit 1 (224 KB)
Header - Biol.Unit 1
Biol.Unit 2 (221 KB)
Header - Biol.Unit 2
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