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4YW2
Biol. Unit 1
Info
Asym.Unit (453 KB)
Biol.Unit 1 (227 KB)
Biol.Unit 2 (224 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF STREPTOCOCCUS PNEUMONIAE NANC, COMPLEX 6'SL
Authors
:
C. D. Owen, P. Lukacik, J. A. Potter, M. Walsh, G. L. Taylor
Date
:
20 Mar 15 (Deposition) - 23 Sep 15 (Release) - 25 Nov 15 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.00
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Sialidase, Neuraminidase, 6'Sl, Cbm40, Hydrolase
(Keyword Search:
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Reference
:
C. D. Owen, P. Lukacik, J. A. Potter, O. Sleator, G. L. Taylor, M. A. Wals
Streptococcus Pneumoniae Nanc: Structural Insights Into The Specificity And Mechanism Of A Sialidase That Produces A Sialidase Inhibitor.
J. Biol. Chem. V. 290 27736 2015
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Hetero Components
(5, 6)
Info
All Hetero Components
1a: BETA-D-GALACTOSE (GALa)
1b: BETA-D-GALACTOSE (GALb)
2a: GLYCEROL (GOLa)
2b: GLYCEROL (GOLb)
2c: GLYCEROL (GOLc)
2d: GLYCEROL (GOLd)
3a: DI(HYDROXYETHYL)ETHER (PEGa)
4a: PHOSPHATE ION (PO4a)
4b: PHOSPHATE ION (PO4b)
5a: O-SIALIC ACID (SIAa)
5b: O-SIALIC ACID (SIAb)
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No.
Name
Count
Type
Full Name
1
GAL
1
Ligand/Ion
BETA-D-GALACTOSE
2
GOL
2
Ligand/Ion
GLYCEROL
3
PEG
1
Ligand/Ion
DI(HYDROXYETHYL)ETHER
4
PO4
1
Ligand/Ion
PHOSPHATE ION
5
SIA
1
Ligand/Ion
O-SIALIC ACID
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Sites
(5, 5)
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All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC8 (SOFTWARE)
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Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ARG A:290 , ASP A:315 , ARG A:600 , ARG A:662 , TYR A:695 , HOH A:1069 , HOH A:1178
binding site for residue PO4 A 801
2
AC2
SOFTWARE
SER A:176 , TRP A:178 , ALA A:205 , ASN A:206 , ASN A:725 , HOH A:981 , HOH A:1076
binding site for residue GOL A 802
3
AC3
SOFTWARE
HIS A:664 , HIS A:683 , ASP A:685
binding site for residue GOL A 803
4
AC4
SOFTWARE
THR A:187 , ALA A:271 , VAL A:272 , HIS A:275 , HOH A:942 , HOH A:1177
binding site for residue PEG A 804
5
AC8
SOFTWARE
LEU A:128 , PHE A:149 , ARG A:151 , GLU A:159 , ARG A:161 , ARG A:237 , PHE A:243 , HOH A:936 , HOH A:989
binding site for Poly-Saccharide residues SIA A 805 through GAL A 806
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SAPs(SNPs)/Variants
(0, 0)
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Exons
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Chain A
Asymmetric Unit 1
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Asym.Unit (453 KB)
Header - Asym.Unit
Biol.Unit 1 (227 KB)
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Biol.Unit 2 (224 KB)
Header - Biol.Unit 2
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