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Asym. Unit
Info
Asym.Unit (274 KB)
Biol.Unit 1 (267 KB)
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(1)
Title
:
STRUCTURE OF THE LIGAND-BINDING DOMAIN OF GLUK1 IN COMPLEX WITH THE ANTAGONIST CNG10111
Authors
:
C. Moller, D. Tapken, J. S. Kastrup, K. Frydenvang
Date
:
06 Mar 15 (Deposition) - 05 Aug 15 (Release) - 26 Aug 15 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.93
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Ionotropic Glutamate Receptor, Kainate Receptor Gluk1, Ligand-Binding Domain, Antagonist, Signaling Protein, Fusion Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
N. Krogsgaard-Larsen, M. Storgaard, C. Mller, C. S. Demmer, J. Hansen L. Han, R. N. Monrad, B. Nielsen, D. Tapken, D. S. Pickering, J. S. Kastrup, K. Frydenvang, L. Bunch
Structure-Activity Relationship Study Of Ionotropic Glutamate Receptor Antagonist (2S, 3R)-3-(3-Carboxyphenyl)Pyrrolidine-2-Carboxylic Acid.
J. Med. Chem. V. 58 6131 2015
(for further references see the
PDB file header
)
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Hetero Components
(5, 12)
Info
All Hetero Components
1a: (3R,4S)-3-(3-CARBOXYPHENYL)-4-PROP... (4E7a)
1b: (3R,4S)-3-(3-CARBOXYPHENYL)-4-PROP... (4E7b)
2a: ACETATE ION (ACTa)
2b: ACETATE ION (ACTb)
2c: ACETATE ION (ACTc)
2d: ACETATE ION (ACTd)
3a: CHLORIDE ION (CLa)
3b: CHLORIDE ION (CLb)
3c: CHLORIDE ION (CLc)
3d: CHLORIDE ION (CLd)
4a: 1,2-ETHANEDIOL (EDOa)
5a: DI(HYDROXYETHYL)ETHER (PEGa)
View:
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No.
Name
Count
Type
Full Name
1
4E7
2
Ligand/Ion
(3R,4S)-3-(3-CARBOXYPHENYL)-4-PROPYL-L-PROLINE
2
ACT
4
Ligand/Ion
ACETATE ION
3
CL
4
Ligand/Ion
CHLORIDE ION
4
EDO
1
Ligand/Ion
1,2-ETHANEDIOL
5
PEG
1
Ligand/Ion
DI(HYDROXYETHYL)ETHER
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Sites
(12, 12)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
GLU A:13 , TYR A:61 , PRO A:88 , LEU A:89 , THR A:90 , ARG A:95 , THR A:142 , MET A:189 , GLU A:190 , SER A:193 , TYR A:216 , HOH A:457 , HOH A:461 , HOH A:474 , HOH A:482 , HOH A:560
binding site for residue 4E7 A 301
02
AC2
SOFTWARE
GLU A:175 , HOH A:414 , LEU B:12 , VAL B:56 , GLY B:59
binding site for residue ACT A 302
03
AC3
SOFTWARE
GLY A:62 , ALA A:63 , ARG A:95
binding site for residue CL A 303
04
AC4
SOFTWARE
LYS A:103 , HOH A:497 , LYS B:103 , HOH B:459
binding site for residue CL A 304
05
AC5
SOFTWARE
LEU A:55
binding site for residue CL A 305
06
AC6
SOFTWARE
HIS A:80 , PRO A:225 , HOH A:516
binding site for residue PEG A 306
07
AC7
SOFTWARE
GLU B:13 , TYR B:61 , PRO B:88 , LEU B:89 , THR B:90 , ARG B:95 , VAL B:137 , THR B:142 , MET B:189 , GLU B:190 , SER B:193 , TYR B:216 , HOH B:480 , HOH B:503 , HOH B:605 , HOH B:646
binding site for residue 4E7 B 301
08
AC8
SOFTWARE
THR A:10 , ILE A:11 , LEU A:12 , LEU A:55 , VAL A:56 , GLY A:59 , GLU B:175 , HOH B:426
binding site for residue ACT B 302
09
AC9
SOFTWARE
PRO B:119 , ILE B:120 , ASP B:125 , LYS B:128 , GLN B:129
binding site for residue ACT B 303
10
AD1
SOFTWARE
ARG A:20 , SER A:22 , HOH B:442
binding site for residue ACT B 304
11
AD2
SOFTWARE
ARG B:31 , LEU B:55
binding site for residue CL B 305
12
AD3
SOFTWARE
LYS A:171 , ASN A:172 , HOH B:403 , HOH B:412
binding site for residue EDO B 306
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
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SCOP Domains
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Pfam Domains
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Asym.Unit (274 KB)
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