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4Y8P
Asym. Unit
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Asym.Unit (2.0 MB)
Biol.Unit 1, α-C (2.0 MB)
Biol.Unit 1 (2.0 MB)
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(1)
Title
:
YEAST 20S PROTEASOME BETA7-DELTA7_CTER MUTANT IN COMPLEX WITH AC-PAL-EP
Authors
:
E. M. Huber, M. Groll
Date
:
16 Feb 15 (Deposition) - 17 Jun 15 (Release) - 01 Jul 15 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.80
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,a,b,c,d,e,f,g,h
Biol. Unit 1: A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,a,b,c,d,e,f,g,h (1x)
Keywords
:
Hydrolase-Hydrolase Inhibitor Complex, Proteasome, Mutant, Inhibitor, Binding Analysis
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
E. M. Huber, G. De Bruin, W. Heinemeyer, G. Paniagua Soriano, H. S. Overkleeft, M. Groll
Systematic Analyses Of Substrate Preferences Of 20S Proteasomes Using Peptidic Epoxyketone Inhibitors.
J. Am. Chem. Soc. V. 137 7835 2015
[
close entry info
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Hetero Components
(6, 31)
Info
All Hetero Components
1a: ACETYL GROUP (ACEa)
1b: ACETYL GROUP (ACEb)
1c: ACETYL GROUP (ACEc)
1d: ACETYL GROUP (ACEd)
1e: ACETYL GROUP (ACEe)
1f: ACETYL GROUP (ACEf)
2a: CHLORIDE ION (CLa)
2b: CHLORIDE ION (CLb)
2c: CHLORIDE ION (CLc)
2d: CHLORIDE ION (CLd)
3a: 2-AMINO-4-METHYL-PENTAN-1-OL (DCLa)
3b: 2-AMINO-4-METHYL-PENTAN-1-OL (DCLb)
3c: 2-AMINO-4-METHYL-PENTAN-1-OL (DCLc)
3d: 2-AMINO-4-METHYL-PENTAN-1-OL (DCLd)
3e: 2-AMINO-4-METHYL-PENTAN-1-OL (DCLe)
3f: 2-AMINO-4-METHYL-PENTAN-1-OL (DCLf)
4a: 2-(N-MORPHOLINO)-ETHANESULFONIC AC... (MESa)
4b: 2-(N-MORPHOLINO)-ETHANESULFONIC AC... (MESb)
5a: MAGNESIUM ION (MGa)
5b: MAGNESIUM ION (MGb)
5c: MAGNESIUM ION (MGc)
5d: MAGNESIUM ION (MGd)
5e: MAGNESIUM ION (MGe)
5f: MAGNESIUM ION (MGf)
5g: MAGNESIUM ION (MGg)
6a: N-PROPANOL (POLa)
6b: N-PROPANOL (POLb)
6c: N-PROPANOL (POLc)
6d: N-PROPANOL (POLd)
6e: N-PROPANOL (POLe)
6f: N-PROPANOL (POLf)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ACE
6
Mod. Amino Acid
ACETYL GROUP
2
CL
4
Ligand/Ion
CHLORIDE ION
3
DCL
6
Mod. Amino Acid
2-AMINO-4-METHYL-PENTAN-1-OL
4
MES
2
Ligand/Ion
2-(N-MORPHOLINO)-ETHANESULFONIC ACID
5
MG
7
Ligand/Ion
MAGNESIUM ION
6
POL
6
Mod. Amino Acid
N-PROPANOL
[
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Sites
(31, 31)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
13: AD4 (SOFTWARE)
14: AD5 (SOFTWARE)
15: AD6 (SOFTWARE)
16: AD7 (SOFTWARE)
17: AD8 (SOFTWARE)
18: AD9 (SOFTWARE)
19: AE1 (SOFTWARE)
20: AE2 (SOFTWARE)
21: AE3 (SOFTWARE)
22: AE4 (SOFTWARE)
23: AE5 (SOFTWARE)
24: AE6 (SOFTWARE)
25: AE7 (SOFTWARE)
26: AE8 (SOFTWARE)
27: AE9 (SOFTWARE)
28: AF1 (SOFTWARE)
29: AF2 (SOFTWARE)
30: AF3 (SOFTWARE)
31: AF4 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
THR G:8 , TYR G:119 , ARG G:122 , ALA G:123 , MET G:125
binding site for residue MG G 301
02
AC2
SOFTWARE
ARG G:111 , ASN G:114 , TYR H:69
binding site for residue CL G 302
03
AC3
SOFTWARE
ALA I:174 , ASP I:177 , SER I:180 , ASP I:204
binding site for residue MG I 301
04
AC4
SOFTWARE
ASP I:204 , ALA Y:165 , HIS Y:166 , ASP Y:168 , ALA Y:169 , SER Y:171
binding site for residue MG I 302
05
AC5
SOFTWARE
ALA K:165 , HIS K:166 , ASP K:168 , ALA K:169 , SER K:171 , ASP W:204
binding site for residue MG K 301
06
AC6
SOFTWARE
THR K:1 , GLY K:47 , MET K:97 , GLY K:130 , SER K:131 , HOH K:404 , DCL d:4 , POL d:5
binding site for residue MES K 302
07
AC7
SOFTWARE
ASP L:222 , ILE V:163 , ASP V:166 , SER V:169
binding site for residue MG L 301
08
AC8
SOFTWARE
ARG N:19 , ILE N:163 , ASP N:166 , SER N:169 , LEU a:34
binding site for residue MG N 201
09
AC9
SOFTWARE
ARG N:45 , GLN N:53
binding site for residue CL N 202
10
AD1
SOFTWARE
ARG U:111 , ASN U:114 , TYR V:69
binding site for residue CL U 301
11
AD2
SOFTWARE
THR Y:1 , GLY Y:47 , MET Y:97 , GLY Y:98 , GLY Y:130 , SER Y:131 , DCL g:4 , POL g:5
binding site for residue MES Y 301
12
AD3
SOFTWARE
ARG Z:28 , THR Z:192 , HIS Z:195 , VAL Z:198
binding site for residue MG Z 301
13
AD4
SOFTWARE
ARG b:45 , GLN b:53
binding site for residue CL b 201
14
AD5
SOFTWARE
THR H:1 , ARG H:19 , SER H:20 , THR H:21 , LYS H:33 , GLY H:47 , ALA H:49 , SER H:129 , GLY H:168 , ACE c:1 , PRO c:2 , HOH c:101
binding site for Ligand residues POL c 5 through ALA c 3 bound to THR H 1
15
AD6
SOFTWARE
THR H:1 , GLY H:47 , ALA H:49 , ALA c:3 , POL c:5 , HOH c:101
binding site for Ligand DCL c 4 bound to THR H 1
16
AD7
SOFTWARE
THR K:1 , ARG K:19 , ALA K:20 , THR K:21 , LYS K:33 , GLY K:47 , TYR K:170 , MES K:302 , ACE d:1 , PRO d:2
binding site for Ligand residues POL d 5 through ALA d 3 bound to THR K 1
17
AD8
SOFTWARE
THR K:1 , GLY K:47 , MES K:302 , ALA d:3 , POL d:5
binding site for Ligand DCL d 4 bound to THR K 1
18
AD9
SOFTWARE
THR N:1 , ARG N:19 , THR N:20 , THR N:21 , LYS N:33 , ARG N:45 , GLY N:47 , SER N:168 , ACE e:1 , PRO e:2 , HOH e:101
binding site for Ligand residues POL e 5 through ALA e 3 bound to THR N 1
19
AE1
SOFTWARE
THR N:1 , THR N:20 , ARG N:45 , GLY N:47 , ALA e:3 , POL e:5 , HOH e:101
binding site for Ligand DCL e 4 bound to THR N 1
20
AE2
SOFTWARE
THR V:1 , ARG V:19 , SER V:20 , THR V:21 , LYS V:33 , GLY V:45 , GLY V:47 , GLY V:168 , PRO f:2 , HOH f:101
binding site for Ligand residues POL f 5 through ALA f 3 bound to THR V 1
21
AE3
SOFTWARE
THR V:1 , SER V:20 , GLY V:45 , GLY V:47 , ALA f:3 , POL f:5 , HOH f:101
binding site for Ligand DCL f 4 bound to THR V 1
22
AE4
SOFTWARE
THR Y:1 , ARG Y:19 , ALA Y:20 , THR Y:21 , LYS Y:33 , GLY Y:47 , SER Y:131 , TYR Y:170 , MES Y:301 , ACE g:1 , PRO g:2
binding site for Ligand residues POL g 5 through ALA g 3 bound to THR Y 1
23
AE5
SOFTWARE
THR Y:1 , GLY Y:47 , MES Y:301 , ALA g:3 , POL g:5
binding site for Ligand DCL g 4 bound to THR Y 1
24
AE6
SOFTWARE
THR b:1 , ARG b:19 , THR b:20 , THR b:21 , LYS b:33 , ARG b:45 , GLY b:47 , SER b:168 , ACE h:1 , PRO h:2 , HOH h:101
binding site for Ligand residues POL h 5 through ALA h 3 bound to THR b 1
25
AE7
SOFTWARE
THR b:1 , THR b:20 , ARG b:45 , GLY b:47 , ALA h:3 , POL h:5 , HOH h:101
binding site for Ligand DCL h 4 bound to THR b 1
26
AE8
SOFTWARE
THR H:21 , ALA H:49 , ASP I:124 , ALA c:3
binding site for Di-peptide ACE c 1 and PRO c 2
27
AE9
SOFTWARE
THR K:21 , ALA K:49 , ASP L:126 , ALA d:3
binding site for Di-peptide ACE d 1 and PRO d 2
28
AF1
SOFTWARE
THR N:21 , ALA N:49 , ALA e:3
binding site for Di-peptide ACE e 1 and PRO e 2
29
AF2
SOFTWARE
THR V:21 , ALA V:49 , ALA f:3
binding site for Di-peptide ACE f 1 and PRO f 2
30
AF3
SOFTWARE
THR Y:21 , ALA Y:49 , ALA g:3
binding site for Di-peptide ACE g 1 and PRO g 2
31
AF4
SOFTWARE
THR b:21 , ALA b:49 , ALA h:3 , HOH h:102
binding site for Di-peptide ACE h 1 and PRO h 2
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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Exons
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SCOP Domains
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CATH Domains
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Pfam Domains
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