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Asym. Unit
Info
Asym.Unit (177 KB)
Biol.Unit 1 (168 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF E. COLI AMINOPEPTIDASE N IN COMPLEX WITH L-BETA HOMOTRYPTOPHAN
Authors
:
A. Addlagatta, R. Gumpena
Date
:
15 Jan 15 (Deposition) - 02 Mar 16 (Release) - 02 Mar 16 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.93
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. Addlagatta, R. Gumpena
Crystal Structure Of E. Coli Aminopeptidase N In Complex With L-Beta Homotryptophan
To Be Published
[
close entry info
]
Hetero Components
(5, 46)
Info
All Hetero Components
1a: GLYCEROL (GOLa)
1b: GLYCEROL (GOLb)
1c: GLYCEROL (GOLc)
1d: GLYCEROL (GOLd)
1e: GLYCEROL (GOLe)
1f: GLYCEROL (GOLf)
1g: GLYCEROL (GOLg)
1h: GLYCEROL (GOLh)
1i: GLYCEROL (GOLi)
1j: GLYCEROL (GOLj)
1k: GLYCEROL (GOLk)
1l: GLYCEROL (GOLl)
1m: GLYCEROL (GOLm)
1n: GLYCEROL (GOLn)
1o: GLYCEROL (GOLo)
1p: GLYCEROL (GOLp)
1q: GLYCEROL (GOLq)
1r: GLYCEROL (GOLr)
1s: GLYCEROL (GOLs)
1t: GLYCEROL (GOLt)
1u: GLYCEROL (GOLu)
1v: GLYCEROL (GOLv)
2a: (3S)-3-AMINO-4-(1H-INDOL-3-YL)BUTA... (HT7a)
3a: MALONATE ION (MLIa)
3b: MALONATE ION (MLIb)
3c: MALONATE ION (MLIc)
3d: MALONATE ION (MLId)
3e: MALONATE ION (MLIe)
3f: MALONATE ION (MLIf)
3g: MALONATE ION (MLIg)
3h: MALONATE ION (MLIh)
3i: MALONATE ION (MLIi)
3j: MALONATE ION (MLIj)
3k: MALONATE ION (MLIk)
3l: MALONATE ION (MLIl)
3m: MALONATE ION (MLIm)
3n: MALONATE ION (MLIn)
4a: SODIUM ION (NAa)
4b: SODIUM ION (NAb)
4c: SODIUM ION (NAc)
4d: SODIUM ION (NAd)
4e: SODIUM ION (NAe)
4f: SODIUM ION (NAf)
4g: SODIUM ION (NAg)
4h: SODIUM ION (NAh)
5a: ZINC ION (ZNa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
GOL
22
Ligand/Ion
GLYCEROL
2
HT7
1
Ligand/Ion
(3S)-3-AMINO-4-(1H-INDOL-3-YL)BUTANOIC ACID
3
MLI
14
Ligand/Ion
MALONATE ION
4
NA
8
Ligand/Ion
SODIUM ION
5
ZN
1
Ligand/Ion
ZINC ION
[
close Hetero Component info
]
Sites
(46, 46)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
13: AD4 (SOFTWARE)
14: AD5 (SOFTWARE)
15: AD6 (SOFTWARE)
16: AD7 (SOFTWARE)
17: AD8 (SOFTWARE)
18: AD9 (SOFTWARE)
19: AE1 (SOFTWARE)
20: AE2 (SOFTWARE)
21: AE3 (SOFTWARE)
22: AE4 (SOFTWARE)
23: AE5 (SOFTWARE)
24: AE6 (SOFTWARE)
25: AE7 (SOFTWARE)
26: AE8 (SOFTWARE)
27: AE9 (SOFTWARE)
28: AF1 (SOFTWARE)
29: AF2 (SOFTWARE)
30: AF3 (SOFTWARE)
31: AF4 (SOFTWARE)
32: AF5 (SOFTWARE)
33: AF6 (SOFTWARE)
34: AF7 (SOFTWARE)
35: AF8 (SOFTWARE)
36: AF9 (SOFTWARE)
37: AG1 (SOFTWARE)
38: AG2 (SOFTWARE)
39: AG3 (SOFTWARE)
40: AG4 (SOFTWARE)
41: AG5 (SOFTWARE)
42: AG6 (SOFTWARE)
43: AG7 (SOFTWARE)
44: AG8 (SOFTWARE)
45: AG9 (SOFTWARE)
46: AH1 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
HIS A:297 , HIS A:301 , GLU A:320 , HT7 A:902
binding site for residue ZN A 901
02
AC2
SOFTWARE
GLN A:119 , GLU A:121 , MET A:260 , ALA A:262 , MET A:263 , GLU A:264 , HIS A:297 , GLU A:298 , HIS A:301 , LYS A:319 , GLU A:320 , ASN A:373 , TYR A:381 , ZN A:901 , MLI A:941 , HOH A:1501
binding site for residue HT7 A 902
03
AC3
SOFTWARE
GLN A:19 , ILE A:20 , LEU A:138 , HOH A:1549 , HOH A:1753
binding site for residue NA A 903
04
AC4
SOFTWARE
ASP A:452 , GOL A:932 , MLI A:946 , HOH A:1001 , HOH A:1664
binding site for residue NA A 904
05
AC5
SOFTWARE
ASN A:399 , SER A:429 , HOH A:1419 , HOH A:1552 , HOH A:1665 , HOH A:1694
binding site for residue NA A 905
06
AC6
SOFTWARE
ASN A:344 , GLU A:382 , HOH A:1079 , HOH A:1161 , HOH A:1339 , HOH A:1344
binding site for residue NA A 906
07
AC7
SOFTWARE
SER A:332 , ASP A:333 , GLY A:335 , MLI A:936 , HOH A:1177 , HOH A:1648
binding site for residue NA A 907
08
AC8
SOFTWARE
GLY A:350 , ASN A:623 , HOH A:1028 , HOH A:1223 , HOH A:1645
binding site for residue NA A 908
09
AC9
SOFTWARE
ASN A:67 , THR A:91 , HOH A:1710 , HOH A:1724 , HOH A:1745
binding site for residue NA A 909
10
AD1
SOFTWARE
LEU A:551 , SER A:570 , THR A:574 , GOL A:921 , HOH A:1328 , HOH A:1390 , HOH A:1469
binding site for residue NA A 910
11
AD2
SOFTWARE
ALA A:531 , LEU A:532 , TRP A:546 , SER A:563 , ASP A:566 , ALA A:567 , SER A:570
binding site for residue GOL A 911
12
AD3
SOFTWARE
LYS A:8 , GLU A:123 , ASP A:312 , TRP A:313 , PHE A:314 , HOH A:1057 , HOH A:1334 , HOH A:1395 , HOH A:1568
binding site for residue GOL A 912
13
AD4
SOFTWARE
THR A:72 , TRP A:74 , VAL A:670 , GLU A:671 , GOL A:915 , HOH A:1502
binding site for residue GOL A 913
14
AD5
SOFTWARE
GLU A:69 , PRO A:70 , TRP A:71 , THR A:72 , ASP A:221 , PRO A:224 , ALA A:278 , TYR A:288 , HOH A:1077
binding site for residue GOL A 914
15
AD6
SOFTWARE
SER A:63 , VAL A:64 , TRP A:71 , TRP A:74 , ARG A:669 , VAL A:670 , GLU A:671 , GOL A:913 , MLI A:934 , HOH A:1347
binding site for residue GOL A 915
16
AD7
SOFTWARE
ASN A:623 , GLY A:791 , MLI A:933 , HOH A:1198 , HOH A:1243
binding site for residue GOL A 916
17
AD8
SOFTWARE
GLU A:292 , VAL A:670 , HIS A:672 , HOH A:1014 , HOH A:1502
binding site for residue GOL A 917
18
AD9
SOFTWARE
ARG A:681 , GLN A:703 , ALA A:707 , ASN A:708 , ASN A:709 , ASP A:712 , HOH A:1069 , HOH A:1521
binding site for residue GOL A 918
19
AE1
SOFTWARE
THR A:755 , PRO A:757 , SER A:792 , ASN A:793 , HOH A:1119 , HOH A:1433
binding site for residue GOL A 919
20
AE2
SOFTWARE
MET A:260 , GLY A:261 , LYS A:274 , TYR A:275 , ARG A:783 , ARG A:825 , MLI A:941 , MLI A:942
binding site for residue GOL A 920
21
AE3
SOFTWARE
ARG A:207 , GLU A:208 , ASP A:248 , LYS A:545 , TRP A:546 , THR A:574 , NA A:910 , HOH A:1007 , HOH A:1091 , HOH A:1390 , HOH A:1469
binding site for residue GOL A 921
22
AE4
SOFTWARE
VAL A:162 , GLN A:177 , GLN A:549 , HOH A:1009 , HOH A:1035
binding site for residue GOL A 922
23
AE5
SOFTWARE
LYS A:144 , GLN A:175 , ASN A:492
binding site for residue GOL A 923
24
AE6
SOFTWARE
SER A:441 , GLN A:442 , GLU A:477 , GLN A:479 , HOH A:1181 , HOH A:1374
binding site for residue GOL A 924
25
AE7
SOFTWARE
ASN A:232 , TRP A:236 , GLU A:239 , HOH A:1014 , HOH A:1059
binding site for residue GOL A 925
26
AE8
SOFTWARE
GLU A:244 , TYR A:245 , ASP A:246 , TRP A:303 , ARG A:307 , LEU A:578 , SER A:590 , LEU A:591 , PRO A:592 , HOH A:1179 , HOH A:1300
binding site for residue GOL A 926
27
AE9
SOFTWARE
LEU A:617 , THR A:618 , LEU A:619 , ARG A:641 , THR A:645 , ALA A:683 , ARG A:686 , PHE A:687 , MLI A:939 , HOH A:1173
binding site for residue GOL A 927
28
AF1
SOFTWARE
LEU A:289 , ASN A:343 , GLU A:615 , ILE A:675 , THR A:679 , HOH A:1027 , HOH A:1155 , HOH A:1584
binding site for residue GOL A 928
29
AF2
SOFTWARE
PRO A:16 , ASP A:17 , TYR A:18 , ARG A:53 , ARG A:134 , HOH A:1056 , HOH A:1093
binding site for residue GOL A 929
30
AF3
SOFTWARE
ASN A:160 , ASP A:246 , LEU A:247 , ASP A:248 , SER A:547 , ASP A:548 , GLN A:549 , HOH A:1091
binding site for residue GOL A 930
31
AF4
SOFTWARE
ASP A:68 , GLU A:69 , THR A:280 , ASP A:281 , ASN A:708
binding site for residue GOL A 931
32
AF5
SOFTWARE
ASP A:452 , TYR A:461 , GLN A:527 , PRO A:528 , TYR A:544 , GLN A:550 , NA A:904 , MLI A:946 , HOH A:1064 , HOH A:1688
binding site for residue GOL A 932
33
AF6
SOFTWARE
ALA A:354 , ILE A:632 , ARG A:832 , ARG A:835 , TYR A:836 , GOL A:916 , HOH A:1028 , HOH A:1120 , HOH A:1261
binding site for residue MLI A 933
34
AF7
SOFTWARE
LEU A:61 , VAL A:62 , TRP A:74 , ARG A:669 , GLU A:671 , GOL A:915 , HOH A:1392
binding site for residue MLI A 934
35
AF8
SOFTWARE
ASP A:28 , LYS A:33 , ARG A:171
binding site for residue MLI A 935
36
AF9
SOFTWARE
GLY A:335 , SER A:336 , ARG A:337 , ALA A:338 , NA A:907 , HOH A:1177 , HOH A:1463 , HOH A:1581
binding site for residue MLI A 936
37
AG1
SOFTWARE
HIS A:11 , ARG A:14 , GLN A:467 , ARG A:468 , THR A:469 , LYS A:478 , GLN A:479 , PRO A:480 , HOH A:1244 , HOH A:1336
binding site for residue MLI A 937
38
AG2
SOFTWARE
ASN A:579 , HIS A:583 , GLN A:587 , LEU A:589 , GLU A:639 , VAL A:640 , ALA A:643
binding site for residue MLI A 938
39
AG3
SOFTWARE
ARG A:641 , GLU A:642 , THR A:645 , ARG A:686 , ALA A:722 , GOL A:927 , HOH A:1023 , HOH A:1119
binding site for residue MLI A 939
40
AG4
SOFTWARE
GLN A:111 , GLY A:113 , PHE A:257 , SER A:777 , HOH A:1126 , HOH A:1144 , HOH A:1276
binding site for residue MLI A 940
41
AG5
SOFTWARE
GLY A:261 , ARG A:293 , GLU A:298 , TYR A:381 , HT7 A:902 , GOL A:920 , MLI A:942 , HOH A:1065 , HOH A:1225
binding site for residue MLI A 941
42
AG6
SOFTWARE
TYR A:376 , THR A:377 , LEU A:378 , TYR A:381 , GLU A:382 , ARG A:825 , GOL A:920 , MLI A:941 , HOH A:1214 , HOH A:1373
binding site for residue MLI A 942
43
AG7
SOFTWARE
GLY A:396 , GLU A:397 , GLU A:398 , HOH A:1002 , HOH A:1048
binding site for residue MLI A 943
44
AG8
SOFTWARE
MET A:555 , ARG A:556 , ARG A:564 , VAL A:602 , ASP A:605 , HOH A:1411
binding site for residue MLI A 944
45
AG9
SOFTWARE
GLU A:239 , ARG A:240 , PHE A:241 , GLN A:401 , GLN A:405 , GLN A:585 , GLN A:587 , HOH A:1005 , HOH A:1491
binding site for residue MLI A 945
46
AH1
SOFTWARE
ASP A:452 , TYR A:544 , LYS A:545 , GLN A:550 , NA A:904 , GOL A:932 , HOH A:1001 , HOH A:1017 , HOH A:1415
binding site for residue MLI A 946
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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Asymmetric Unit 1
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Asym.Unit (177 KB)
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