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4XKN
Asym. Unit
Info
Asym.Unit (173 KB)
Biol.Unit 1 (168 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF NIKA FROM STAPHYLOCOCCUS AUREUS IN COMPLEX WITH NI(L-HIS)2 (CO-CRYSTALLIZATION WITH NI(II) AND L-HISTIDINE)
Authors
:
H. Lebrette, C. Cavazza
Date
:
12 Jan 15 (Deposition) - 11 Feb 15 (Release) - 15 Apr 15 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.85
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Extracytoplasmic Nickel-Binding Protein, Nickel Import, Abc-Type Importer, Transport Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
H. Lebrette, E. Borezee-Durant, L. Martin, P. Richaud, E. Boeri Erba C. Cavazza
Novel Insights Into Nickel Import In Staphylococcus Aureus: The Positive Role Of Free Histidine And Structural Characterization Of A New Thiazolidine-Type Nickel Chelator
Metallomics V. 7 613 2015
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Hetero Components
(4, 21)
Info
All Hetero Components
1a: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ET... (EPEa)
2a: GLYCEROL (GOLa)
2b: GLYCEROL (GOLb)
2c: GLYCEROL (GOLc)
2d: GLYCEROL (GOLd)
2e: GLYCEROL (GOLe)
2f: GLYCEROL (GOLf)
2g: GLYCEROL (GOLg)
2h: GLYCEROL (GOLh)
2i: GLYCEROL (GOLi)
2j: GLYCEROL (GOLj)
2k: GLYCEROL (GOLk)
2l: GLYCEROL (GOLl)
2m: GLYCEROL (GOLm)
2n: GLYCEROL (GOLn)
2o: GLYCEROL (GOLo)
2p: GLYCEROL (GOLp)
2q: GLYCEROL (GOLq)
3a: HISTIDINE (HISa)
3b: HISTIDINE (HISb)
4a: NICKEL (II) ION (NIa)
View:
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Label:
No.
Name
Count
Type
Full Name
1
EPE
1
Ligand/Ion
4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID
2
GOL
17
Ligand/Ion
GLYCEROL
3
HIS
2
Mod. Amino Acid
HISTIDINE
4
NI
1
Ligand/Ion
NICKEL (II) ION
[
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Sites
(21, 21)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
13: AD4 (SOFTWARE)
14: AD5 (SOFTWARE)
15: AD6 (SOFTWARE)
16: AD7 (SOFTWARE)
17: AD8 (SOFTWARE)
18: AD9 (SOFTWARE)
19: AE1 (SOFTWARE)
20: AE2 (SOFTWARE)
21: AE3 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
HIS A:502 , HIS A:503
binding site for residue NI A 501
02
AC2
SOFTWARE
LEU A:17 , ARG A:234 , TYR A:322 , ARG A:325 , ILE A:354 , GLU A:355 , TYR A:369 , SER A:370 , NI A:501 , HIS A:503 , HOH A:745
binding site for residue HIS A 502
03
AC3
SOFTWARE
PHE A:134 , ARG A:234 , GLU A:355 , TYR A:369 , SER A:370 , PHE A:371 , GLY A:372 , NI A:501 , HIS A:502 , HOH A:840 , HOH A:851
binding site for residue HIS A 503
04
AC4
SOFTWARE
ILE A:48 , GLU A:49 , LYS A:50 , TYR A:56 , TYR A:101 , LYS A:389 , ASP A:390 , ASP A:404 , GOL A:508 , HOH A:613 , HOH A:660
binding site for residue EPE A 504
05
AC5
SOFTWARE
THR A:109 , LYS A:114 , LEU A:115 , THR A:116 , LYS A:245 , HOH A:667
binding site for residue GOL A 505
06
AC6
SOFTWARE
LYS A:32 , LYS A:456 , GLY A:461 , ILE A:462 , TYR A:463 , HOH A:778 , HOH A:919 , HOH A:964 , HOH A:969
binding site for residue GOL A 506
07
AC7
SOFTWARE
GLU A:83 , ALA A:110 , GLN A:295 , ASP A:338 , LYS A:341 , GOL A:520 , HOH A:645 , HOH A:688
binding site for residue GOL A 507
08
AC8
SOFTWARE
TYR A:101 , ASN A:384 , LYS A:388 , LYS A:389 , EPE A:504 , HOH A:781
binding site for residue GOL A 508
09
AC9
SOFTWARE
ASP A:260 , GLY A:263 , ILE A:264 , HIS A:267 , ILE A:268 , VAL A:334 , HOH A:817 , HOH A:818
binding site for residue GOL A 509
10
AD1
SOFTWARE
ASP A:256 , ARG A:261 , THR A:277 , PRO A:290 , LYS A:291 , THR A:293 , SER A:431 , HOH A:783 , HOH A:805 , HOH A:815
binding site for residue GOL A 510
11
AD2
SOFTWARE
GLN A:58 , ASN A:60 , ASP A:61 , THR A:63 , THR A:119 , ALA A:122 , TYR A:123 , HOH A:777 , HOH A:1039
binding site for residue GOL A 511
12
AD3
SOFTWARE
SER A:144 , ASP A:145 , THR A:149 , ILE A:348 , LYS A:349 , SER A:350 , GOL A:519 , HOH A:606 , HOH A:668
binding site for residue GOL A 512
13
AD4
SOFTWARE
TYR A:463 , HOH A:750 , HOH A:806 , HOH A:819 , HOH A:865 , HOH A:891 , HOH A:952
binding site for residue GOL A 513
14
AD5
SOFTWARE
LYS A:226 , LYS A:453 , ASN A:454 , TYR A:455
binding site for residue GOL A 514
15
AD6
SOFTWARE
LYS A:143 , LYS A:349 , VAL A:351 , ASP A:352 , ASP A:353 , HOH A:627 , HOH A:885
binding site for residue GOL A 515
16
AD7
SOFTWARE
LYS A:114 , HIS A:242 , LYS A:245 , MET A:247 , THR A:248 , ARG A:252 , GOL A:518 , HOH A:605 , HOH A:615 , HOH A:683 , HOH A:684
binding site for residue GOL A 516
17
AD8
SOFTWARE
LYS A:54 , LYS A:69 , ASP A:70 , ASN A:402
binding site for residue GOL A 517
18
AD9
SOFTWARE
SER A:55 , GLU A:67 , ARG A:252 , ASN A:399 , ASN A:400 , GOL A:516 , HOH A:603 , HOH A:605 , HOH A:674
binding site for residue GOL A 518
19
AE1
SOFTWARE
THR A:149 , GLN A:157 , ILE A:158 , LYS A:159 , LYS A:349 , GOL A:512 , HOH A:601 , HOH A:665
binding site for residue GOL A 519
20
AE2
SOFTWARE
ALA A:110 , ASN A:296 , ILE A:297 , GLU A:298 , GOL A:507
binding site for residue GOL A 520
21
AE3
SOFTWARE
GLU A:90 , ILE A:108 , HOH A:829 , HOH A:944
binding site for residue GOL A 521
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SAPs(SNPs)/Variants
(0, 0)
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Chain A
Asymmetric Unit 1
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Asym.Unit (173 KB)
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Biol.Unit 1 (168 KB)
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