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4XIA
Asym. Unit
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Asym.Unit (139 KB)
Biol.Unit 1 (265 KB)
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(1)
Title
:
STRUCTURES OF D-XYLOSE ISOMERASE FROM ARTHROBACTER STRAIN B3728 CONTAINING THE INHIBITORS XYLITOL AND D-SORBITOL AT 2.5 ANGSTROMS AND 2.3 ANGSTROMS RESOLUTION, RESPECTIVELY
Authors
:
K. Henrick, C. A. Collyer, D. M. Blow
Date
:
05 Jul 89 (Deposition) - 15 Apr 90 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.30
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (2x)
Keywords
:
Isomerase(Intramolecular Oxidoreductase)
(Keyword Search:
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Reference
:
K. Henrick, C. A. Collyer, D. M. Blow
Structures Of D-Xylose Isomerase From Arthrobacter Strain B3728 Containing The Inhibitors Xylitol And D-Sorbitol At 2. 5 A And 2. 3 A Resolution, Respectively.
J. Mol. Biol. V. 208 129 1989
(for further references see the
PDB file header
)
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Hetero Components
(2, 4)
Info
All Hetero Components
1a: MAGNESIUM ION (MGa)
1b: MAGNESIUM ION (MGb)
2a: D-SORBITOL (SORa)
2b: D-SORBITOL (SORb)
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No.
Name
Count
Type
Full Name
1
MG
2
Ligand/Ion
MAGNESIUM ION
2
SOR
2
Ligand/Ion
D-SORBITOL
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Sites
(4, 4)
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1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
TRP A:15 , HIS A:53 , THR A:89 , VAL A:134 , TRP A:136 , GLU A:180 , LYS A:182 , GLU A:216 , HIS A:219 , ASP A:244 , ASP A:292 , MG A:399 , HOH A:507 , HOH A:508 , HOH A:509 , HOH A:510 , PHE B:25
BINDING SITE FOR RESIDUE SOR A 400
2
AC2
SOFTWARE
PHE A:25 , TRP B:15 , HIS B:53 , MET B:87 , THR B:89 , VAL B:134 , TRP B:136 , GLU B:180 , LYS B:182 , GLU B:216 , HIS B:219 , ASP B:244 , ASP B:292 , MG B:399 , HOH B:531 , HOH B:532 , HOH B:533 , HOH B:534
BINDING SITE FOR RESIDUE SOR B 400
3
AC3
SOFTWARE
GLU A:180 , GLU A:216 , ASP A:244 , ASP A:292 , SOR A:400
BINDING SITE FOR RESIDUE MG A 399
4
AC4
SOFTWARE
GLU B:180 , GLU B:216 , ASP B:244 , ASP B:292 , SOR B:400
BINDING SITE FOR RESIDUE MG B 399
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SAPs(SNPs)/Variants
(0, 0)
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Exons
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SCOP Domains
(1, 2)
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1a: SCOP_d4xiaa_ (A:)
1b: SCOP_d4xiab_ (B:)
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Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
TIM beta/alpha-barrel
(3956)
Superfamily
:
Xylose isomerase-like
(125)
Family
:
Xylose isomerase
(97)
Protein domain
:
D-xylose isomerase
(82)
Arthrobacter, strain b3728 [TaxId: 1663]
(17)
1a
d4xiaa_
A:
1b
d4xiab_
B:
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CATH Domains
(1, 2)
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all CATH domains
1a: CATH_4xiaA00 (A:2-394)
1b: CATH_4xiaB00 (B:2-394)
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Class
:
Alpha Beta
(26913)
Architecture
:
Alpha-Beta Barrel
(2994)
Topology
:
TIM Barrel
(2806)
Homologous Superfamily
:
Divalent-metal-dependent TIM barrel enzymes
(98)
Nrrl b3728 (Arthrobacter sp)
(17)
1a
4xiaA00
A:2-394
1b
4xiaB00
B:2-394
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Pfam Domains
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Asym.Unit (139 KB)
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