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4XDR
Asym. Unit
Info
Asym.Unit (171 KB)
Biol.Unit 1 (165 KB)
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Title
:
CRYSTAL STRUCTURE OF TREPONEMA PALLIDUM TP0796 FLAVIN TRAFFICKING PROTEIN, A BIFUNCTIONAL FMN TRANSFERASE/FAD PYROPHOSPHATASE, D284A MUTANT, ADN BOUND FORM
Authors
:
D. R. Tomchick, C. A. Brautigam, R. K. Deka, M. V. Norgard
Date
:
19 Dec 14 (Deposition) - 14 Oct 15 (Release) - 14 Oct 15 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.40
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Fmn Transferase, Fad Pyrophosphatase, Hydrolase, Bimetal Center, Flavin Turnover, Treponema Pallidum, Transferase
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Gene Ontology, PubMed, Web (Google)
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Reference
:
R. K. Deka, C. A. Brautigam, W. Z. Liu, D. R. Tomchick, M. V. Norgard
Evidence For Posttranslational Protein Flavinylation In The Syphilis Spirochete Treponema Pallidum: Structural And Biochemical Insights From The Catalytic Core Of A Periplasmic Flavin-Trafficking Protein.
Mbio V. 6 00519 2015
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Hetero Components
(4, 13)
Info
All Hetero Components
1a: ACETATE ION (ACTa)
1b: ACETATE ION (ACTb)
1c: ACETATE ION (ACTc)
1d: ACETATE ION (ACTd)
1e: ACETATE ION (ACTe)
1f: ACETATE ION (ACTf)
2a: ADENOSINE (ADNa)
3a: 1,2-ETHANEDIOL (EDOa)
3b: 1,2-ETHANEDIOL (EDOb)
3c: 1,2-ETHANEDIOL (EDOc)
3d: 1,2-ETHANEDIOL (EDOd)
3e: 1,2-ETHANEDIOL (EDOe)
4a: MAGNESIUM ION (MGa)
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No.
Name
Count
Type
Full Name
1
ACT
6
Ligand/Ion
ACETATE ION
2
ADN
1
Ligand/Ion
ADENOSINE
3
EDO
5
Ligand/Ion
1,2-ETHANEDIOL
4
MG
1
Ligand/Ion
MAGNESIUM ION
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Sites
(13, 13)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
13: AD4 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
HIS A:267 , HOH A:628 , HOH A:671 , HOH A:675 , HOH A:694
binding site for residue MG A 401
02
AC2
SOFTWARE
ALA A:96 , PHE A:97 , ASN A:98 , LEU A:101 , VAL A:105 , ASP A:159 , GLY A:161 , ALA A:162 , HIS A:256 , ILE A:258 , EDO A:411 , HOH A:589 , HOH A:647 , HOH A:662
binding site for residue ADN A 402
03
AC3
SOFTWARE
ARG A:24 , LEU A:185 , LYS A:198 , ASN A:213
binding site for residue ACT A 403
04
AC4
SOFTWARE
SER A:27 , LYS A:28 , ALA A:180 , LEU A:181 , ASP A:182 , HOH A:594 , HOH A:650
binding site for residue ACT A 404
05
AC5
SOFTWARE
GLU A:9 , ALA A:13
binding site for residue ACT A 405
06
AC6
SOFTWARE
ARG A:85 , ARG A:279 , ASP A:282 , VAL A:308 , ARG A:340 , HOH A:668
binding site for residue ACT A 406
07
AC7
SOFTWARE
GLY A:190 , ILE A:192 , GLY A:215 , ILE A:216 , VAL A:237 , THR A:239 , HOH A:621
binding site for residue ACT A 407
08
AC8
SOFTWARE
GLU A:9 , TYR A:10 , SER A:11 , ARG A:12 , ALA A:13 , ARG A:22
binding site for residue ACT A 408
09
AC9
SOFTWARE
ALA A:162 , ASN A:191 , THR A:239 , SER A:240 , GLU A:244 , HOH A:647
binding site for residue EDO A 409
10
AD1
SOFTWARE
VAL A:143 , ASP A:182 , GLY A:196 , ASP A:234 , ARG A:303 , HOH A:545
binding site for residue EDO A 410
11
AD2
SOFTWARE
VAL A:105 , ASN A:109 , PHE A:112 , ARG A:245 , HIS A:256 , ADN A:402
binding site for residue EDO A 411
12
AD3
SOFTWARE
PHE A:276 , ALA A:277 , PRO A:278 , GLY A:307 , ASP A:309 , HOH A:658
binding site for residue EDO A 412
13
AD4
SOFTWARE
ALA A:103 , ARG A:129
binding site for residue EDO A 413
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
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SCOP Domains
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CATH Domains
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Pfam Domains
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Chain A
Asymmetric Unit 1
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Asym.Unit (171 KB)
Header - Asym.Unit
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