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Asym. Unit
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Asym.Unit (65 KB)
Biol.Unit 1 (118 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE AUTOLYSIN LYTA FROM STREPTOCOCCUS PNEUMONIAE TIGR4
Authors
:
W. Cheng, Q. Li, C. Z. Zhou, Y. X. Chen
Date
:
28 Nov 14 (Deposition) - 27 May 15 (Release) - 24 Jun 15 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.10
Chains
:
Asym. Unit : A
Biol. Unit 1: A (2x)
Keywords
:
Autolysin, Amidase, Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
Q. Li, W. Cheng, C. Morlot, X. H. Bai, Y. L. Jiang, W. Wang, D. I. Roper, T. Vernet, Y. H. Dong, Y. Chen, C. Z. Zhou
Full-Length Structure Of The Major Autolysin Lyta.
Acta Crystallogr. , Sect. D V. 71 1373 2015
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Hetero Components
(4, 19)
Info
All Hetero Components
1a: CHOLINE ION (CHTa)
1b: CHOLINE ION (CHTb)
1c: CHOLINE ION (CHTc)
1d: CHOLINE ION (CHTd)
1e: CHOLINE ION (CHTe)
2a: GLYCEROL (GOLa)
2b: GLYCEROL (GOLb)
2c: GLYCEROL (GOLc)
2d: GLYCEROL (GOLd)
2e: GLYCEROL (GOLe)
2f: GLYCEROL (GOLf)
3a: SELENOMETHIONINE (MSEa)
3b: SELENOMETHIONINE (MSEb)
3c: SELENOMETHIONINE (MSEc)
3d: SELENOMETHIONINE (MSEd)
3e: SELENOMETHIONINE (MSEe)
3f: SELENOMETHIONINE (MSEf)
3g: SELENOMETHIONINE (MSEg)
4a: ZINC ION (ZNa)
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No.
Name
Count
Type
Full Name
1
CHT
5
Ligand/Ion
CHOLINE ION
2
GOL
6
Ligand/Ion
GLYCEROL
3
MSE
7
Mod. Amino Acid
SELENOMETHIONINE
4
ZN
1
Ligand/Ion
ZINC ION
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Sites
(12, 12)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ASN A:111 , GLU A:115 , TRP A:157 , HOH A:515 , HOH A:517 , HOH A:534 , HOH A:545
binding site for residue GOL A 401
02
AC2
SOFTWARE
ASN A:30 , GLU A:38 , TYR A:41
binding site for residue GOL A 402
03
AC3
SOFTWARE
GLN A:18 , ASP A:68 , GLY A:192 , TYR A:194 , HOH A:501 , HOH A:516 , HOH A:535 , HOH A:541
binding site for residue GOL A 403
04
AC4
SOFTWARE
ARG A:9 , THR A:10 , ASP A:11 , TRP A:43 , HOH A:510
binding site for residue GOL A 404
05
AC5
SOFTWARE
GLY A:77 , ASN A:79 , GOL A:406
binding site for residue GOL A 405
06
AC6
SOFTWARE
GLU A:48 , GOL A:405 , HOH A:574
binding site for residue GOL A 406
07
AC7
SOFTWARE
HIS A:26 , HIS A:133 , ASP A:149 , HOH A:563
binding site for residue ZN A 407
08
AC8
SOFTWARE
TRP A:220 , TRP A:228 , GLU A:275
binding site for residue CHT A 408
09
AC9
SOFTWARE
TRP A:248 , TYR A:264 , TYR A:269 , HOH A:540 , HOH A:551
binding site for residue CHT A 409
10
AD1
SOFTWARE
TRP A:261 , TRP A:268 , ASP A:312
binding site for residue CHT A 410
11
AD2
SOFTWARE
PHE A:199 , TRP A:206 , GLU A:254 , HOH A:716 , HOH A:720
binding site for residue CHT A 411
12
AD3
SOFTWARE
TRP A:186 , TYR A:194 , SER A:212 , TYR A:214
binding site for residue CHT A 412
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
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SCOP Domains
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CATH Domains
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Asymmetric Unit 1
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