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Asym. Unit
Info
Asym.Unit (207 KB)
Biol.Unit 1 (203 KB)
Biol.Unit 2 (199 KB)
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(1)
Title
:
UNDA, AN OXYGEN-ACTIVATING, NON-HEME IRON DEPENDENT DESATURASE/DECARBOXYLASE
Authors
:
X. Li, J. D. H. Cate
Date
:
11 Nov 14 (Deposition) - 24 Dec 14 (Release) - 07 Jan 15 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.90
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (2x)
Biol. Unit 2: B (2x)
Keywords
:
Non-Heme Iron Dependent Desaturase/Decarboxylase, 1-Undecene Biosynthesis, Aliphatic Medium-Chain 1-Alkenes Biosynthesis, Metalloenzyme
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
Z. Rui, X. Li, X. Zhu, J. Liu, B. Domigan, I. Barr, J. H. Cate, W. Zhang
Microbial Biosynthesis Of Medium-Chain 1-Alkenes By A Nonheme Iron Oxidase.
Proc. Natl. Acad. Sci. Usa V. 111 18237 2014
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Hetero Components
(3, 19)
Info
All Hetero Components
1a: FE (III) ION (FEa)
1b: FE (III) ION (FEb)
2a: GLYCEROL (GOLa)
2b: GLYCEROL (GOLb)
2c: GLYCEROL (GOLc)
2d: GLYCEROL (GOLd)
2e: GLYCEROL (GOLe)
2f: GLYCEROL (GOLf)
2g: GLYCEROL (GOLg)
2h: GLYCEROL (GOLh)
3a: SULFATE ION (SO4a)
3b: SULFATE ION (SO4b)
3c: SULFATE ION (SO4c)
3d: SULFATE ION (SO4d)
3e: SULFATE ION (SO4e)
3f: SULFATE ION (SO4f)
3g: SULFATE ION (SO4g)
3h: SULFATE ION (SO4h)
3i: SULFATE ION (SO4i)
View:
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Label:
No.
Name
Count
Type
Full Name
1
FE
2
Ligand/Ion
FE (III) ION
2
GOL
8
Ligand/Ion
GLYCEROL
3
SO4
9
Ligand/Ion
SULFATE ION
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Sites
(19, 19)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
13: AD4 (SOFTWARE)
14: AD5 (SOFTWARE)
15: AD6 (SOFTWARE)
16: AD7 (SOFTWARE)
17: AD8 (SOFTWARE)
18: AD9 (SOFTWARE)
19: AE1 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
GLU A:101 , HIS A:104 , HIS A:194 , GOL A:302 , HOH A:667
binding site for residue FE A 301
02
AC2
SOFTWARE
PHE A:68 , GLU A:101 , HIS A:104 , GLU A:159 , THR A:162 , HIS A:194 , FE A:301 , GOL A:304 , SO4 A:308 , HOH A:667
binding site for residue GOL A 302
03
AC3
SOFTWARE
TYR A:41 , TYR A:57 , GLY A:61 , LEU A:134 , MET A:236 , PHE A:239 , GOL A:304
binding site for residue GOL A 303
04
AC4
SOFTWARE
GLY A:61 , VAL A:65 , ILE A:158 , THR A:162 , TRP A:165 , MET A:236 , GOL A:302 , GOL A:303
binding site for residue GOL A 304
05
AC5
SOFTWARE
ARG A:96 , ARG A:99 , HOH A:442
binding site for residue GOL A 305
06
AC6
SOFTWARE
ARG A:92 , ARG A:96 , HOH A:526 , HOH A:532 , HOH A:647 , HOH A:694
binding site for residue SO4 A 306
07
AC7
SOFTWARE
ARG A:99 , ASN A:103 , TYR A:107 , HOH A:442 , HOH A:472 , HOH A:563
binding site for residue SO4 A 307
08
AC8
SOFTWARE
TRP A:93 , ASN A:97 , VAL A:100 , GLU A:101 , GLU A:159 , ASP A:198 , HIS A:201 , GOL A:302 , HOH A:561
binding site for residue SO4 A 308
09
AC9
SOFTWARE
PRO A:85 , GLY A:86 , GLU A:87 , ASP A:88 , MET A:89
binding site for residue SO4 A 309
10
AD1
SOFTWARE
GLU B:101 , HIS B:104 , HIS B:194 , GOL B:302 , HOH B:491
binding site for residue FE B 301
11
AD2
SOFTWARE
PHE B:68 , GLU B:101 , HIS B:104 , GLU B:159 , HIS B:194 , FE B:301 , GOL B:304 , SO4 B:309 , HOH B:491
binding site for residue GOL B 302
12
AD3
SOFTWARE
TYR B:41 , TYR B:57 , GLY B:61 , LEU B:134 , MET B:236 , PHE B:239 , GOL B:304
binding site for residue GOL B 303
13
AD4
SOFTWARE
GLY B:61 , VAL B:65 , ILE B:158 , THR B:162 , TRP B:165 , MET B:236 , GOL B:302 , GOL B:303
binding site for residue GOL B 304
14
AD5
SOFTWARE
ARG B:7 , THR B:8 , PRO B:10 , LEU B:11 , CYS B:170 , ALA B:176 , MET B:188 , LYS B:192 , GLN B:196
binding site for residue GOL B 305
15
AD6
SOFTWARE
ARG B:92 , ARG B:96 , HOH B:430
binding site for residue SO4 B 306
16
AD7
SOFTWARE
ARG B:99 , ASN B:103 , TYR B:107 , HOH B:448 , HOH B:494
binding site for residue SO4 B 307
17
AD8
SOFTWARE
ARG B:96 , ARG B:99 , HOH B:415
binding site for residue SO4 B 308
18
AD9
SOFTWARE
PHE B:68 , ASN B:97 , GLU B:101 , GLU B:159 , HIS B:201 , GOL B:302 , HOH B:491 , HOH B:492
binding site for residue SO4 B 309
19
AE1
SOFTWARE
HIS B:84 , PRO B:85 , GLY B:86 , GLU B:87 , ASP B:88 , MET B:89
binding site for residue SO4 B 310
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
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Exons
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SCOP Domains
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Asym.Unit (207 KB)
Header - Asym.Unit
Biol.Unit 1 (203 KB)
Header - Biol.Unit 1
Biol.Unit 2 (199 KB)
Header - Biol.Unit 2
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