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4WLZ
Biol. Unit 2
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Asym.Unit (103 KB)
Biol.Unit 1 (50 KB)
Biol.Unit 2 (51 KB)
Biol.Unit 3 (98 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF MOUSE XYLOSIDE XYLOSYLTRANSFERASE 1 COMPLEXED WITH MANGANESE AND UDP
Authors
:
H. Yu, H. Li
Date
:
08 Oct 14 (Deposition) - 04 Nov 15 (Release) - 20 Apr 16 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.03
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: A,B (1x)
Keywords
:
Glycosyltransferase, Transferase
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
H. Yu, M. Takeuchi, J. Lebarron, J. Kantharia, E. London, H. Bakker, R. S. Haltiwanger, H. Li, H. Takeuchi
Notch-Modifying Xylosyltransferase Structures Support An Sni-Like Retaining Mechanism.
Nat. Chem. Biol. V. 11 847 2015
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Hetero Components
(1, 1)
Info
All Hetero Components
1a: MANGANESE (II) ION (MNa)
1b: MANGANESE (II) ION (MNb)
2a: SULFATE ION (SO4a)
3a: URIDINE-5'-DIPHOSPHATE (UDPa)
3b: URIDINE-5'-DIPHOSPHATE (UDPb)
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No.
Name
Count
Type
Full Name
1
MN
-1
Ligand/Ion
MANGANESE (II) ION
2
SO4
-1
Ligand/Ion
SULFATE ION
3
UDP
1
Ligand/Ion
URIDINE-5'-DIPHOSPHATE
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Sites
(4, 4)
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1: AC2 (SOFTWARE)
2: AC3 (SOFTWARE)
3: AC4 (SOFTWARE)
4: AC5 (SOFTWARE)
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Evidence
Residues
Description
1
AC2
SOFTWARE
MET A:103 , PHE A:104 , THR A:105 , LEU A:113 , ASP A:225 , LEU A:226 , ASP A:227 , HIS A:382 , ASN A:384 , CYS A:385 , MN A:401 , ASP B:361 , HIS B:362
binding site for residue UDP A 402
2
AC3
SOFTWARE
ARG A:261 , ARG A:268 , TYR A:364 , SER B:195
binding site for residue SO4 A 403
3
AC4
SOFTWARE
ASP B:225 , ASP B:227 , HIS B:382 , UDP B:402
binding site for residue MN B 401
4
AC5
SOFTWARE
TRP A:358 , ASP A:361 , HIS A:362 , MET B:103 , PHE B:104 , THR B:105 , LEU B:113 , LYS B:116 , ASP B:225 , LEU B:226 , ASP B:227 , ASN B:384 , CYS B:385 , MN B:401
binding site for residue UDP B 402
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SAPs(SNPs)/Variants
(0, 0)
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Asym.Unit (103 KB)
Header - Asym.Unit
Biol.Unit 1 (50 KB)
Header - Biol.Unit 1
Biol.Unit 2 (51 KB)
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Biol.Unit 3 (98 KB)
Header - Biol.Unit 3
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