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4WKU
Asym. Unit
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Asym.Unit (251 KB)
Biol.Unit 1 (244 KB)
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Title
:
N-ALKYLBORONIC ACID INHIBITORS REVEAL DETERMINANTS OF LIGAND SPECIFICITY IN THE QUORUM-QUENCHING AND SIDEROPHORE BIOSYNTHETIC ENZYME PVDQ
Authors
:
R. Wu, K. D. Clevenger, W. Fast, D. Liu
Date
:
03 Oct 14 (Deposition) - 12 Nov 14 (Release) - 12 Nov 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.00
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
N-Alkylboronic Acid Inhibitors Of Pvdq
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
K. D. Clevenger, R. Wu, D. Liu, W. Fast
N-Alkylboronic Acid Inhibitors Reveal Determinants Of Ligan Specificity In The Quorum-Quenching And Siderophore Biosynthetic Enzyme Pvdq.
Biochemistry V. 53 6679 2014
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Hetero Components
(2, 17)
Info
All Hetero Components
1a: HEXYL(TRIHYDROXY)BORATE(1-) (3QJa)
2a: GLYCEROL (GOLa)
2b: GLYCEROL (GOLb)
2c: GLYCEROL (GOLc)
2d: GLYCEROL (GOLd)
2e: GLYCEROL (GOLe)
2f: GLYCEROL (GOLf)
2g: GLYCEROL (GOLg)
2h: GLYCEROL (GOLh)
2i: GLYCEROL (GOLi)
2j: GLYCEROL (GOLj)
2k: GLYCEROL (GOLk)
2l: GLYCEROL (GOLl)
2m: GLYCEROL (GOLm)
2n: GLYCEROL (GOLn)
2o: GLYCEROL (GOLo)
2p: GLYCEROL (GOLp)
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Label:
No.
Name
Count
Type
Full Name
1
3QJ
1
Ligand/Ion
HEXYL(TRIHYDROXY)BORATE(1-)
2
GOL
16
Ligand/Ion
GLYCEROL
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Sites
(17, 17)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
13: AD4 (SOFTWARE)
14: AD5 (SOFTWARE)
15: AD6 (SOFTWARE)
16: AD7 (SOFTWARE)
17: AD8 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
LYS A:48 , GLU A:93 , LEU A:94 , ASP A:95 , ASP A:180
binding site for residue GOL A 201
02
AC2
SOFTWARE
TRP A:105 , LEU A:106 , ARG A:167 , HOH A:390 , GLN B:341
binding site for residue GOL A 202
03
AC3
SOFTWARE
ARG A:77 , GLU A:79 , ASN A:107 , ARG A:164 , HOH A:392 , HOH A:438
binding site for residue GOL A 203
04
AC4
SOFTWARE
TRP A:116 , THR A:159 , ASP A:160 , HOH A:302 , HOH A:310 , LYS B:643
binding site for residue GOL A 204
05
AC5
SOFTWARE
SER B:217 , HIS B:239 , PHE B:240 , THR B:285 , VAL B:286 , ASN B:485 , HOH B:1055
binding site for residue 3QJ B 801
06
AC6
SOFTWARE
GLU A:72 , SER A:91 , ARG A:168 , PRO B:241 , ASN B:243 , GLY B:244 , ALA B:245 , MET B:246
binding site for residue GOL B 802
07
AC7
SOFTWARE
ARG B:258 , LEU B:259 , ASP B:260 , ASN B:382 , GLN B:383 , HOH B:996 , HOH B:1210
binding site for residue GOL B 803
08
AC8
SOFTWARE
LEU A:97 , ILE A:101 , VAL A:183 , VAL B:335 , GLU B:336 , HIS B:337 , HOH B:903
binding site for residue GOL B 804
09
AC9
SOFTWARE
GLU A:172 , GLY A:173 , GLN A:177 , TRP B:402
binding site for residue GOL B 805
10
AD1
SOFTWARE
ARG B:365 , ALA B:454 , TRP B:455 , ALA B:464 , GLY B:465
binding site for residue GOL B 806
11
AD2
SOFTWARE
LEU B:308 , GLY B:311 , ARG B:312 , SER B:313 , ASP B:729 , GLU B:732 , HOH B:928 , HOH B:943
binding site for residue GOL B 807
12
AD3
SOFTWARE
GLN B:471 , GLY B:499 , PHE B:500 , HOH B:1249
binding site for residue GOL B 808
13
AD4
SOFTWARE
ILE B:343 , SER B:451 , ALA B:454 , GLN B:662 , HOH B:909 , HOH B:1081
binding site for residue GOL B 809
14
AD5
SOFTWARE
SER B:227 , ALA B:228 , ASP B:229 , MET B:233 , LEU B:527 , GLU B:528 , ALA B:529 , THR B:702 , HOH B:1090 , HOH B:1104
binding site for residue GOL B 810
15
AD6
SOFTWARE
PHE B:596 , LEU B:599 , GLY B:601 , ALA B:602 , TRP B:603
binding site for residue GOL B 811
16
AD7
SOFTWARE
ARG B:391 , VAL B:474 , LEU B:476
binding site for residue GOL B 812
17
AD8
SOFTWARE
LEU B:580 , ASP B:581 , ASP B:654 , HOH B:1247
binding site for residue GOL B 813
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SAPs(SNPs)/Variants
(0, 0)
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Exons
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SCOP Domains
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CATH Domains
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (251 KB)
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