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4WJY
Asym. Unit
Info
Asym.Unit (176 KB)
Biol.Unit 1 (166 KB)
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(1)
Title
:
ESHERICHIA COLI NITRITE REDUCTASE NRFA H264N
Authors
:
T. A. Clarke, M. J. Edwards, C. W. J. Lockwood
Date
:
01 Oct 14 (Deposition) - 11 Mar 15 (Release) - 18 Mar 15 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.15
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Nitrite Reductase Cytochrome Mutagenesis, Oxidoreductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
C. W. Lockwood, B. Burlat, M. R. Cheesman, M. Kern, J. Simon, T. A. Clarke, D. J. Richardson, J. N. Butt
Resolution Of Key Roles For The Distal Pocket Histidine In Cytochrome C Nitrite Reductases.
J. Am. Chem. Soc. V. 137 3059 2015
[
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Hetero Components
(3, 17)
Info
All Hetero Components
1a: CALCIUM ION (CAa)
1b: CALCIUM ION (CAb)
1c: CALCIUM ION (CAc)
1d: CALCIUM ION (CAd)
2a: 1,2-ETHANEDIOL (EDOa)
2b: 1,2-ETHANEDIOL (EDOb)
2c: 1,2-ETHANEDIOL (EDOc)
3a: PROTOPORPHYRIN IX CONTAINING FE (HEMa)
3b: PROTOPORPHYRIN IX CONTAINING FE (HEMb)
3c: PROTOPORPHYRIN IX CONTAINING FE (HEMc)
3d: PROTOPORPHYRIN IX CONTAINING FE (HEMd)
3e: PROTOPORPHYRIN IX CONTAINING FE (HEMe)
3f: PROTOPORPHYRIN IX CONTAINING FE (HEMf)
3g: PROTOPORPHYRIN IX CONTAINING FE (HEMg)
3h: PROTOPORPHYRIN IX CONTAINING FE (HEMh)
3i: PROTOPORPHYRIN IX CONTAINING FE (HEMi)
3j: PROTOPORPHYRIN IX CONTAINING FE (HEMj)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CA
4
Ligand/Ion
CALCIUM ION
2
EDO
3
Ligand/Ion
1,2-ETHANEDIOL
3
HEM
10
Ligand/Ion
PROTOPORPHYRIN IX CONTAINING FE
[
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Sites
(17, 17)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
13: AD4 (SOFTWARE)
14: AD5 (SOFTWARE)
15: AD6 (SOFTWARE)
16: AD7 (SOFTWARE)
17: AD8 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ASN A:89 , ASP A:100 , THR A:104 , ARG A:106 , CYS A:122 , CYS A:125 , LYS A:126 , CYS A:212 , HIS A:213 , TYR A:216 , VAL A:225 , ASN A:264 , HIS A:388 , HEM A:503 , HOH A:638 , HOH A:657 , HOH A:658 , HOH A:660 , HOH A:692 , HOH A:705 , HOH A:753 , HOH A:771 , HOH A:999
binding site for residue HEM A 501
02
AC2
SOFTWARE
HIS A:49 , GLN A:52 , TYR A:53 , TRP A:56 , GLY A:159 , CYS A:160 , CYS A:163 , HIS A:164 , PHE A:171 , GLY A:174 , PRO A:176 , ARG A:201 , GLN A:205 , ILE A:283 , MET A:287 , LYS A:289 , TYR A:298 , THR A:299 , HIS A:301 , HEM A:503 , HOH A:773 , HOH A:883
binding site for residue HEM A 502
03
AC3
SOFTWARE
GLN A:62 , PRO A:91 , ARG A:92 , GLY A:93 , HIS A:94 , PHE A:96 , ALA A:97 , ASP A:100 , CYS A:125 , LEU A:158 , VAL A:208 , CYS A:209 , CYS A:212 , HIS A:213 , HIS A:286 , MET A:287 , ILE A:303 , HEM A:501 , HEM A:502 , HEM A:504 , CA A:507 , HOH A:662 , HOH A:667 , HOH A:882
binding site for residue HEM A 503
04
AC4
SOFTWARE
HIS A:213 , TRP A:270 , HIS A:275 , VAL A:280 , THR A:281 , CYS A:282 , CYS A:285 , HIS A:286 , ASN A:305 , PRO A:306 , VAL A:329 , HIS A:388 , HIS A:391 , MET A:392 , HIS A:393 , HEM A:503 , HEM A:505 , CA A:507 , HOH A:697 , HOH A:752 , HOH A:767 , HOH A:798 , HOH A:824
binding site for residue HEM A 504
05
AC5
SOFTWARE
HIS A:275 , VAL A:280 , PHE A:307 , THR A:313 , CYS A:314 , CYS A:317 , HIS A:318 , ARG A:332 , MET A:392 , HEM A:504 , EDO A:508 , HOH A:706 , HOH A:928 , HIS B:318 , GLN B:320 , HEM B:505
binding site for residue HEM A 505
06
AC6
SOFTWARE
GLU A:215 , TYR A:216 , LYS A:261 , GLN A:263 , HOH A:644 , HOH A:653
binding site for residue CA A 506
07
AC7
SOFTWARE
PRO A:91 , HEM A:503 , HEM A:504 , HOH A:662 , HOH A:688 , HOH A:697 , HOH A:798
binding site for residue CA A 507
08
AC8
SOFTWARE
CYS A:317 , HEM A:505 , HEM B:505
binding site for residue EDO A 508
09
AC9
SOFTWARE
ASP A:308 , PHE A:310 , ALA A:311 , LYS A:322
binding site for residue EDO A 509
10
AD1
SOFTWARE
TYR B:88 , ASN B:89 , ASP B:100 , THR B:104 , ARG B:106 , LEU B:118 , CYS B:122 , CYS B:125 , LYS B:126 , CYS B:212 , HIS B:213 , TYR B:216 , ASN B:264 , HIS B:388 , HEM B:503 , HOH B:633 , HOH B:645 , HOH B:674 , HOH B:690 , HOH B:699 , HOH B:781 , HOH B:898
binding site for residue HEM B 501
11
AD2
SOFTWARE
HIS B:49 , GLN B:52 , TYR B:53 , TRP B:56 , GLY B:159 , CYS B:160 , CYS B:163 , HIS B:164 , PHE B:171 , GLY B:174 , LEU B:178 , ARG B:201 , GLN B:205 , MET B:287 , LYS B:289 , TYR B:298 , THR B:299 , HIS B:301 , HEM B:503 , HOH B:676 , HOH B:748 , HOH B:910
binding site for residue HEM B 502
12
AD3
SOFTWARE
GLU B:215 , TYR B:216 , LYS B:261 , GLN B:263 , HOH B:638 , HOH B:646
binding site for residue CA B 506
13
AD4
SOFTWARE
PRO B:91 , HEM B:503 , HEM B:504 , HOH B:653 , HOH B:701 , HOH B:901
binding site for residue CA B 507
14
AD5
SOFTWARE
ARG B:74 , ASP B:345 , HIS B:349 , ILE B:431 , ILE B:434 , HOH B:786 , HOH B:872
binding site for residue EDO B 508
15
AD6
SOFTWARE
GLN B:62 , PRO B:91 , ARG B:92 , GLY B:93 , HIS B:94 , PHE B:96 , ALA B:97 , ASP B:100 , CYS B:125 , LYS B:126 , LEU B:158 , SER B:206 , MET B:207 , VAL B:208 , GLY B:210 , GLN B:211 , CYS B:212 , HIS B:213 , CYS B:282 , HIS B:286 , ILE B:303 , HEM B:501 , HEM B:502 , HEM B:504 , CA B:507 , HOH B:653 , HOH B:669 , HOH B:878
binding site for Di-peptide HEM B 503 and CYS B 209
16
AD7
SOFTWARE
SER B:206 , CYS B:209 , HIS B:213 , TRP B:270 , HIS B:275 , THR B:281 , ILE B:283 , ASP B:284 , CYS B:285 , HIS B:286 , HIS B:388 , HIS B:391 , MET B:392 , HIS B:393 , HEM B:503 , HEM B:505 , CA B:507 , HOH B:813 , HOH B:901
binding site for Di-peptide HEM B 504 and CYS B 282
17
AD8
SOFTWARE
HIS A:318 , GLN A:320 , HEM A:505 , EDO A:508 , ILE B:274 , HIS B:275 , ASN B:278 , VAL B:280 , PHE B:307 , PHE B:310 , THR B:313 , ALA B:315 , ASN B:316 , CYS B:317 , HIS B:318 , ARG B:332 , MET B:392 , HEM B:504 , HOH B:803 , HOH B:830
binding site for Di-peptide HEM B 505 and CYS B 314
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
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SCOP Domains
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CATH Domains
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Pfam Domains
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select residue range 5 to 10 in all chains
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