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4WJG
Asym. Unit
Info
Asym.Unit (1.9 MB)
Biol.Unit 1 (662 KB)
Biol.Unit 2 (663 KB)
Biol.Unit 3 (664 KB)
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Title
:
STRUCTURE OF T. BRUCEI HAPTOGLOBIN-HEMOGLOBIN RECEPTOR BINDING TO HUMAN HAPTOGLOBIN-HEMOGLOBIN
Authors
:
K. Stoedkilde, M. Torvund-Jensen, S. K. Moestrup, C. B. F. Andersen
Date
:
30 Sep 14 (Deposition) - 26 Nov 14 (Release) - 03 Dec 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.10
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,1,2,3,4
Biol. Unit 1: A,B,C,D,E,F,G,H,I,J (1x)
Biol. Unit 2: K,L,M,N,O,P,Q,R,S,T (1x)
Biol. Unit 3: U,V,W,X,Y,Z,1,2,3,4 (1x)
Keywords
:
Endocytosis, Trypanosome, Receptor
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
K. Stdkilde, M. Torvund-Jensen, S. K. Moestrup, C. B. Andersen
Structural Basis For Trypanosomal Haem Acquisition And Susceptibility To The Host Innate Immune System.
Nat Commun V. 5 5487 2014
[
close entry info
]
Hetero Components
(3, 67)
Info
All Hetero Components
1a: PROTOPORPHYRIN IX CONTAINING FE (HEMa)
1b: PROTOPORPHYRIN IX CONTAINING FE (HEMb)
1c: PROTOPORPHYRIN IX CONTAINING FE (HEMc)
1d: PROTOPORPHYRIN IX CONTAINING FE (HEMd)
1e: PROTOPORPHYRIN IX CONTAINING FE (HEMe)
1f: PROTOPORPHYRIN IX CONTAINING FE (HEMf)
1g: PROTOPORPHYRIN IX CONTAINING FE (HEMg)
1h: PROTOPORPHYRIN IX CONTAINING FE (HEMh)
1i: PROTOPORPHYRIN IX CONTAINING FE (HEMi)
1j: PROTOPORPHYRIN IX CONTAINING FE (HEMj)
1k: PROTOPORPHYRIN IX CONTAINING FE (HEMk)
1l: PROTOPORPHYRIN IX CONTAINING FE (HEMl)
2a: N-ACETYL-D-GLUCOSAMINE (NAGa)
2aa: N-ACETYL-D-GLUCOSAMINE (NAGaa)
2ab: N-ACETYL-D-GLUCOSAMINE (NAGab)
2ac: N-ACETYL-D-GLUCOSAMINE (NAGac)
2ad: N-ACETYL-D-GLUCOSAMINE (NAGad)
2ae: N-ACETYL-D-GLUCOSAMINE (NAGae)
2af: N-ACETYL-D-GLUCOSAMINE (NAGaf)
2ag: N-ACETYL-D-GLUCOSAMINE (NAGag)
2ah: N-ACETYL-D-GLUCOSAMINE (NAGah)
2ai: N-ACETYL-D-GLUCOSAMINE (NAGai)
2aj: N-ACETYL-D-GLUCOSAMINE (NAGaj)
2ak: N-ACETYL-D-GLUCOSAMINE (NAGak)
2al: N-ACETYL-D-GLUCOSAMINE (NAGal)
2am: N-ACETYL-D-GLUCOSAMINE (NAGam)
2an: N-ACETYL-D-GLUCOSAMINE (NAGan)
2ao: N-ACETYL-D-GLUCOSAMINE (NAGao)
2ap: N-ACETYL-D-GLUCOSAMINE (NAGap)
2aq: N-ACETYL-D-GLUCOSAMINE (NAGaq)
2b: N-ACETYL-D-GLUCOSAMINE (NAGb)
2c: N-ACETYL-D-GLUCOSAMINE (NAGc)
2d: N-ACETYL-D-GLUCOSAMINE (NAGd)
2e: N-ACETYL-D-GLUCOSAMINE (NAGe)
2f: N-ACETYL-D-GLUCOSAMINE (NAGf)
2g: N-ACETYL-D-GLUCOSAMINE (NAGg)
2h: N-ACETYL-D-GLUCOSAMINE (NAGh)
2i: N-ACETYL-D-GLUCOSAMINE (NAGi)
2j: N-ACETYL-D-GLUCOSAMINE (NAGj)
2k: N-ACETYL-D-GLUCOSAMINE (NAGk)
2l: N-ACETYL-D-GLUCOSAMINE (NAGl)
2m: N-ACETYL-D-GLUCOSAMINE (NAGm)
2n: N-ACETYL-D-GLUCOSAMINE (NAGn)
2o: N-ACETYL-D-GLUCOSAMINE (NAGo)
2p: N-ACETYL-D-GLUCOSAMINE (NAGp)
2q: N-ACETYL-D-GLUCOSAMINE (NAGq)
2r: N-ACETYL-D-GLUCOSAMINE (NAGr)
2s: N-ACETYL-D-GLUCOSAMINE (NAGs)
2t: N-ACETYL-D-GLUCOSAMINE (NAGt)
2u: N-ACETYL-D-GLUCOSAMINE (NAGu)
2v: N-ACETYL-D-GLUCOSAMINE (NAGv)
2w: N-ACETYL-D-GLUCOSAMINE (NAGw)
2x: N-ACETYL-D-GLUCOSAMINE (NAGx)
2y: N-ACETYL-D-GLUCOSAMINE (NAGy)
2z: N-ACETYL-D-GLUCOSAMINE (NAGz)
3a: OXYGEN MOLECULE (OXYa)
3b: OXYGEN MOLECULE (OXYb)
3c: OXYGEN MOLECULE (OXYc)
3d: OXYGEN MOLECULE (OXYd)
3e: OXYGEN MOLECULE (OXYe)
3f: OXYGEN MOLECULE (OXYf)
3g: OXYGEN MOLECULE (OXYg)
3h: OXYGEN MOLECULE (OXYh)
3i: OXYGEN MOLECULE (OXYi)
3j: OXYGEN MOLECULE (OXYj)
3k: OXYGEN MOLECULE (OXYk)
3l: OXYGEN MOLECULE (OXYl)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
HEM
12
Ligand/Ion
PROTOPORPHYRIN IX CONTAINING FE
2
NAG
43
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
3
OXY
12
Ligand/Ion
OXYGEN MOLECULE
[
close Hetero Component info
]
Sites
(57, 57)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
13: AD4 (SOFTWARE)
14: AD5 (SOFTWARE)
15: AD6 (SOFTWARE)
16: AD7 (SOFTWARE)
17: AD8 (SOFTWARE)
18: AD9 (SOFTWARE)
19: AE1 (SOFTWARE)
20: AE2 (SOFTWARE)
21: AE3 (SOFTWARE)
22: AE4 (SOFTWARE)
23: AE5 (SOFTWARE)
24: AE6 (SOFTWARE)
25: AE7 (SOFTWARE)
26: AE8 (SOFTWARE)
27: AE9 (SOFTWARE)
28: AF1 (SOFTWARE)
29: AF2 (SOFTWARE)
30: AF3 (SOFTWARE)
31: AF4 (SOFTWARE)
32: AF5 (SOFTWARE)
33: AF6 (SOFTWARE)
34: AF7 (SOFTWARE)
35: AF8 (SOFTWARE)
36: AF9 (SOFTWARE)
37: AG1 (SOFTWARE)
38: AG2 (SOFTWARE)
39: AG3 (SOFTWARE)
40: AG4 (SOFTWARE)
41: AG5 (SOFTWARE)
42: AG6 (SOFTWARE)
43: AG7 (SOFTWARE)
44: AG8 (SOFTWARE)
45: AG9 (SOFTWARE)
46: AH1 (SOFTWARE)
47: AH2 (SOFTWARE)
48: AH3 (SOFTWARE)
49: AH4 (SOFTWARE)
50: AH5 (SOFTWARE)
51: AH6 (SOFTWARE)
52: AH7 (SOFTWARE)
53: AH8 (SOFTWARE)
54: AH9 (SOFTWARE)
55: AI1 (SOFTWARE)
56: AI2 (SOFTWARE)
57: AI3 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
TYR A:42 , PHE A:43 , PHE A:46 , LYS A:61 , ALA A:65 , LEU A:86 , HIS A:87 , LEU A:91 , VAL A:93 , ASN A:97 , PHE A:98 , LEU A:101 , VAL A:132 , LEU A:136 , OXY A:202
binding site for residue HEM A 201
02
AC2
SOFTWARE
PHE A:43 , HIS A:58 , VAL A:62 , HEM A:201
binding site for residue OXY A 202
03
AC3
SOFTWARE
PHE B:41 , PHE B:42 , LYS B:66 , ALA B:70 , LEU B:88 , HIS B:92 , VAL B:98 , ASN B:102 , PHE B:103 , LEU B:106 , LEU B:141 , OXY B:202 , LYS E:56 , SER E:59 , LYS E:164
binding site for residue HEM B 201
04
AC4
SOFTWARE
PHE B:42 , HIS B:63 , VAL B:67 , HEM B:201
binding site for residue OXY B 202
05
AC5
SOFTWARE
TYR F:42 , PHE F:43 , PHE F:46 , HIS F:58 , ALA F:65 , LEU F:83 , LEU F:86 , HIS F:87 , LEU F:91 , VAL F:93 , LEU F:101 , VAL F:132 , OXY F:202
binding site for residue HEM F 201
06
AC6
SOFTWARE
PHE F:43 , HIS F:58 , VAL F:62 , HEM F:201
binding site for residue OXY F 202
07
AC7
SOFTWARE
PHE G:41 , PHE G:42 , LYS G:66 , ALA G:70 , LEU G:88 , HIS G:92 , VAL G:98 , ASN G:102 , PHE G:103 , LEU G:106 , LEU G:141 , OXY G:202 , LYS J:56 , SER J:59 , LYS J:164
binding site for residue HEM G 201
08
AC8
SOFTWARE
PHE G:42 , HIS G:63 , VAL G:67 , HEM G:201
binding site for residue OXY G 202
09
AC9
SOFTWARE
TYR K:42 , PHE K:43 , PHE K:46 , HIS K:58 , ALA K:65 , LEU K:86 , HIS K:87 , LEU K:91 , VAL K:93 , ASN K:97 , PHE K:98 , LEU K:101 , LEU K:136 , OXY K:202
binding site for residue HEM K 201
10
AD1
SOFTWARE
PHE K:43 , HIS K:58 , VAL K:62 , HEM K:201
binding site for residue OXY K 202
11
AD2
SOFTWARE
PHE L:41 , PHE L:42 , LYS L:66 , ALA L:70 , LEU L:88 , HIS L:92 , VAL L:98 , ASN L:102 , PHE L:103 , LEU L:106 , LEU L:141 , OXY L:202 , LYS O:56 , SER O:59 , LYS O:164
binding site for residue HEM L 201
12
AD3
SOFTWARE
PHE L:42 , HIS L:63 , VAL L:67 , HEM L:201
binding site for residue OXY L 202
13
AD4
SOFTWARE
TYR P:42 , PHE P:43 , PHE P:46 , HIS P:58 , LYS P:61 , ALA P:65 , LEU P:83 , LEU P:86 , HIS P:87 , LEU P:91 , VAL P:93 , ASN P:97 , PHE P:98 , LEU P:101 , VAL P:132 , LEU P:136 , OXY P:202
binding site for residue HEM P 201
14
AD5
SOFTWARE
HIS P:58 , VAL P:62 , HEM P:201
binding site for residue OXY P 202
15
AD6
SOFTWARE
PHE Q:41 , PHE Q:42 , LYS Q:66 , ALA Q:70 , LEU Q:88 , HIS Q:92 , VAL Q:98 , ASN Q:102 , PHE Q:103 , LEU Q:106 , LEU Q:141 , OXY Q:202 , LYS T:56 , SER T:59 , ILE T:60 , LYS T:164
binding site for residue HEM Q 201
16
AD7
SOFTWARE
PHE Q:42 , HIS Q:63 , VAL Q:67 , HEM Q:201
binding site for residue OXY Q 202
17
AD8
SOFTWARE
TYR U:42 , PHE U:43 , PHE U:46 , LYS U:61 , ALA U:65 , LEU U:83 , LEU U:86 , HIS U:87 , LEU U:91 , VAL U:93 , ASN U:97 , PHE U:98 , LEU U:101 , VAL U:132 , OXY U:202
binding site for residue HEM U 201
18
AD9
SOFTWARE
HIS U:58 , VAL U:62 , HEM U:201
binding site for residue OXY U 202
19
AE1
SOFTWARE
PHE V:41 , PHE V:42 , LYS V:66 , LEU V:88 , HIS V:92 , VAL V:98 , ASN V:102 , LEU V:106 , VAL V:137 , LEU V:141 , OXY V:202 , LYS Y:56 , SER Y:59 , LYS Y:164
binding site for residue HEM V 201
20
AE2
SOFTWARE
PHE V:42 , HIS V:63 , VAL V:67 , HEM V:201
binding site for residue OXY V 202
21
AE3
SOFTWARE
TYR Z:42 , PHE Z:43 , PHE Z:46 , HIS Z:58 , ALA Z:65 , LEU Z:83 , LEU Z:86 , HIS Z:87 , LEU Z:91 , VAL Z:93 , LEU Z:101 , LEU Z:136 , OXY Z:202
binding site for residue HEM Z 201
22
AE4
SOFTWARE
HIS Z:58 , VAL Z:62 , HEM Z:201
binding site for residue OXY Z 202
23
AE5
SOFTWARE
PHE 1:41 , PHE 1:42 , LYS 1:66 , LEU 1:88 , HIS 1:92 , VAL 1:98 , ASN 1:102 , PHE 1:103 , LEU 1:106 , LEU 1:141 , OXY 1:202 , LYS 4:56 , SER 4:59 , LYS 4:164
binding site for residue HEM 1 201
24
AE6
SOFTWARE
PHE 1:42 , HIS 1:63 , VAL 1:67 , HEM 1:201
binding site for residue OXY 1 202
25
AE7
SOFTWARE
ASN 2:180 , THR 2:182 , PHE 2:288
binding site for Mono-Saccharide NAG 2 1001 bound to ASN 2 180
26
AE8
SOFTWARE
HIS 2:178 , HIS 2:179 , ASN 2:203
binding site for Poly-Saccharide residues NAG 2 1002 through NAG 2 1003 bound to ASN 2 203
27
AE9
SOFTWARE
ASN 2:237 , GLN 2:240 , GLU 2:332
binding site for Poly-Saccharide residues NAG 2 1004 through NAG 2 1005 bound to ASN 2 237
28
AF1
SOFTWARE
LEU 4:134 , ASN 4:137
binding site for Mono-Saccharide NAG 4 1001 bound to ASN 4 137
29
AF2
SOFTWARE
THR 4:205 , SER 4:206 , ASN 4:241
binding site for Mono-Saccharide NAG 4 1002 bound to ASN 4 241
30
AF3
SOFTWARE
ASN C:180 , PHE C:288
binding site for Mono-Saccharide NAG C 1001 bound to ASN C 180
31
AF4
SOFTWARE
HIS C:178 , HIS C:179 , ASN C:203
binding site for Poly-Saccharide residues NAG C 1002 through NAG C 1003 bound to ASN C 203
32
AF5
SOFTWARE
ASN C:207
binding site for Mono-Saccharide NAG C 1004 bound to ASN C 207
33
AF6
SOFTWARE
ASN C:237 , GLN C:240 , GLU C:332 , ALA T:36 , LYS T:183
binding site for Poly-Saccharide residues NAG C 1005 through NAG C 1006 bound to ASN C 237
34
AF7
SOFTWARE
LEU E:134 , ASN E:137
binding site for Mono-Saccharide NAG E 1001 bound to ASN E 137
35
AF8
SOFTWARE
THR E:205 , SER E:206 , ASN E:241
binding site for Mono-Saccharide NAG E 1002 bound to ASN E 241
36
AF9
SOFTWARE
ASN H:180 , THR H:182 , PHE H:288
binding site for Mono-Saccharide NAG H 1001 bound to ASN H 180
37
AG1
SOFTWARE
ASN H:203 , HIS H:204
binding site for Mono-Saccharide NAG H 1002 bound to ASN H 203
38
AG2
SOFTWARE
ASN H:237 , GLN H:240 , GLU H:332 , ALA O:36 , LYS O:183 , ASN O:185
binding site for Poly-Saccharide residues NAG H 1003 through NAG H 1004 bound to ASN H 237
39
AG3
SOFTWARE
ASN J:137
binding site for Mono-Saccharide NAG J 1001 bound to ASN J 137
40
AG4
SOFTWARE
THR J:205 , SER J:206 , ASN J:241
binding site for Mono-Saccharide NAG J 1002 bound to ASN J 241
41
AG5
SOFTWARE
ASN M:180 , PHE M:288
binding site for Mono-Saccharide NAG M 1001 bound to ASN M 180
42
AG6
SOFTWARE
HIS M:179 , ASN M:203
binding site for Poly-Saccharide residues NAG M 1002 through NAG M 1003 bound to ASN M 203
43
AG7
SOFTWARE
ASN M:207
binding site for Mono-Saccharide NAG M 1004 bound to ASN M 207
44
AG8
SOFTWARE
ALA J:36 , ASN M:237 , GLN M:240 , GLU M:332
binding site for Poly-Saccharide residues NAG M 1005 through NAG M 1006 bound to ASN M 237
45
AG9
SOFTWARE
ASN O:137
binding site for Mono-Saccharide NAG O 1001 bound to ASN O 137
46
AH1
SOFTWARE
THR O:205 , SER O:206 , ASN O:241
binding site for Mono-Saccharide NAG O 1002 bound to ASN O 241
47
AH2
SOFTWARE
ASN R:180 , THR R:182 , PHE R:288
binding site for Mono-Saccharide NAG R 1001 bound to ASN R 180
48
AH3
SOFTWARE
HIS R:179 , ASN R:203
binding site for Poly-Saccharide residues NAG R 1002 through NAG R 1003 bound to ASN R 203
49
AH4
SOFTWARE
ASN R:207
binding site for Mono-Saccharide NAG R 1004 bound to ASN R 207
50
AH5
SOFTWARE
ALA E:180 , LYS E:183 , ASN R:237 , GLN R:240 , GLU R:332
binding site for Poly-Saccharide residues NAG R 1005 through NAG R 1006 bound to ASN R 237
51
AH6
SOFTWARE
ASN T:137
binding site for Mono-Saccharide NAG T 1001 bound to ASN T 137
52
AH7
SOFTWARE
THR T:205 , SER T:206 , ASN T:241
binding site for Mono-Saccharide NAG T 1002 bound to ASN T 241
53
AH8
SOFTWARE
ASN W:180 , PHE W:288
binding site for Mono-Saccharide NAG W 1001 bound to ASN W 180
54
AH9
SOFTWARE
HIS W:179 , ASN W:203
binding site for Mono-Saccharide NAG W 1002 bound to ASN W 203
55
AI1
SOFTWARE
ASN W:237 , GLN W:240 , GLU W:332
binding site for Poly-Saccharide residues NAG W 1003 through NAG W 1004 bound to ASN W 237
56
AI2
SOFTWARE
ASN Y:137 , GLU Y:138
binding site for Mono-Saccharide NAG Y 1001 bound to ASN Y 137
57
AI3
SOFTWARE
THR Y:205 , SER Y:206 , GLU Y:207 , ASN Y:241
binding site for Mono-Saccharide NAG Y 1002 bound to ASN Y 241
[
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]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
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CATH Domains
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Asym.Unit (1.9 MB)
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