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4W6Z
Asym. Unit
Info
Asym.Unit (442 KB)
Biol.Unit 1 (435 KB)
Biol.Unit 2 (432 KB)
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Title
:
YEAST ALCOHOL DEHYDROGENASE I, SACCHAROMYCES CEREVISIAE FERMENTATIVE ENZYME
Authors
:
B. V. Plapp, B. R. Savarimuthu, S. Ramaswamy
Date
:
21 Aug 14 (Deposition) - 03 Sep 14 (Release) - 01 Oct 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.40
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B (2x)
Biol. Unit 2: C,D (2x)
Keywords
:
Tetramer Of Asymmetric Dimers, Zinc Coordination, Intramolecular Disulfide Bonds, Oxidoreductase
(Keyword Search:
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]
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Reference
:
S. B. Raj, S. Ramaswamy, B. V. Plapp
Yeast Alcohol Dehydrogenase Structure And Catalysis.
Biochemistry V. 53 5791 2014
(for further references see the
PDB file header
)
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Hetero Components
(3, 14)
Info
All Hetero Components
1a: NICOTINAMIDE-8-IODO-ADENINE-DINUCL... (8IDa)
1b: NICOTINAMIDE-8-IODO-ADENINE-DINUCL... (8IDb)
2a: TRIFLUOROETHANOL (ETFa)
2b: TRIFLUOROETHANOL (ETFb)
2c: TRIFLUOROETHANOL (ETFc)
2d: TRIFLUOROETHANOL (ETFd)
3a: ZINC ION (ZNa)
3b: ZINC ION (ZNb)
3c: ZINC ION (ZNc)
3d: ZINC ION (ZNd)
3e: ZINC ION (ZNe)
3f: ZINC ION (ZNf)
3g: ZINC ION (ZNg)
3h: ZINC ION (ZNh)
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Label:
No.
Name
Count
Type
Full Name
1
8ID
2
Ligand/Ion
NICOTINAMIDE-8-IODO-ADENINE-DINUCLEOTIDE
2
ETF
4
Ligand/Ion
TRIFLUOROETHANOL
3
ZN
8
Ligand/Ion
ZINC ION
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Sites
(14, 14)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
13: AD4 (SOFTWARE)
14: AD5 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
CYS A:43 , THR A:45 , HIS A:66 , CYS A:153 , 8ID A:403 , ETF A:404
binding site for residue ZN A 401
02
AC2
SOFTWARE
CYS A:97 , MET A:98 , CYS A:100 , CYS A:103 , CYS A:111
binding site for residue ZN A 402
03
AC3
SOFTWARE
CYS A:43 , HIS A:44 , THR A:45 , HIS A:48 , TRP A:54 , CYS A:153 , THR A:157 , GLY A:177 , ALA A:179 , GLY A:180 , GLY A:181 , LEU A:182 , ILE A:200 , ASP A:201 , LYS A:206 , PHE A:221 , VAL A:245 , SER A:246 , SER A:248 , ALA A:251 , VAL A:268 , GLY A:269 , MET A:270 , SER A:293 , TYR A:294 , VAL A:295 , ARG A:340 , ZN A:401 , ETF A:404 , HOH A:515 , HOH A:516 , VAL B:284
binding site for residue 8ID A 403
04
AC4
SOFTWARE
CYS A:43 , THR A:45 , TRP A:54 , HIS A:66 , TRP A:92 , CYS A:153 , MET A:270 , TYR A:294 , ZN A:401 , 8ID A:403
binding site for residue ETF A 404
05
AC5
SOFTWARE
CYS B:43 , HIS B:66 , GLU B:67 , CYS B:153 , ETF B:404
binding site for residue ZN B 401
06
AC6
SOFTWARE
CYS B:97 , CYS B:100 , CYS B:103 , CYS B:111
binding site for residue ZN B 402
07
AC7
SOFTWARE
THR B:45 , HIS B:66 , CYS B:153 , MET B:270 , VAL B:295 , ZN B:401
binding site for residue ETF B 404
08
AC8
SOFTWARE
CYS C:43 , THR C:45 , HIS C:66 , CYS C:153 , 8ID C:403 , ETF C:404
binding site for residue ZN C 401
09
AC9
SOFTWARE
CYS C:97 , CYS C:100 , CYS C:103 , CYS C:111
binding site for residue ZN C 402
10
AD1
SOFTWARE
CYS C:43 , HIS C:44 , THR C:45 , HIS C:48 , TRP C:54 , CYS C:153 , THR C:157 , GLY C:177 , ALA C:179 , GLY C:180 , GLY C:181 , LEU C:182 , ILE C:200 , ASP C:201 , LYS C:206 , PHE C:221 , VAL C:245 , SER C:246 , SER C:248 , ALA C:251 , VAL C:268 , GLY C:269 , MET C:270 , SER C:293 , TYR C:294 , VAL C:295 , ARG C:340 , ZN C:401 , ETF C:404 , HOH C:513 , HOH C:514 , VAL D:284
binding site for residue 8ID C 403
11
AD2
SOFTWARE
CYS C:43 , THR C:45 , TRP C:54 , HIS C:66 , TRP C:92 , CYS C:153 , MET C:270 , TYR C:294 , ZN C:401 , 8ID C:403
binding site for residue ETF C 404
12
AD3
SOFTWARE
CYS D:43 , HIS D:66 , GLU D:67 , CYS D:153 , ETF D:404
binding site for residue ZN D 401
13
AD4
SOFTWARE
CYS D:97 , MET D:98 , CYS D:100 , CYS D:103 , CYS D:111
binding site for residue ZN D 402
14
AD5
SOFTWARE
THR D:45 , HIS D:66 , CYS D:153 , VAL D:295 , ZN D:401 , HOH D:526
binding site for residue ETF D 404
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
(0, 0)
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SCOP Domains
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CATH Domains
(0, 0 ; only for superseded entry 2HCY: 2,8)
Info
all CATH domains
1a: CATH_2hcyA02 ()
1b: CATH_2hcyB02 ()
1c: CATH_2hcyC02 ()
1d: CATH_2hcyD02 ()
2a: CATH_2hcyA01 ()
2b: CATH_2hcyB01 ()
2c: CATH_2hcyC01 ()
2d: CATH_2hcyD01 ()
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (442 KB)
Header - Asym.Unit
Biol.Unit 1 (435 KB)
Header - Biol.Unit 1
Biol.Unit 2 (432 KB)
Header - Biol.Unit 2
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