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Asym. Unit
Info
Asym.Unit (143 KB)
Biol.Unit 1 (133 KB)
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(1)
Title
:
HIGH-RESOLUTION CRYSTAL STRUCTURE OF FC BOUND TO ITS HUMAN RECEPTOR FC-GAMMA-RI
Authors
:
J. M. M. Caaveiro, M. Kiyoshi, K. Tsumoto
Date
:
15 Aug 14 (Deposition) - 29 Apr 15 (Release) - 20 May 15 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.80
Chains
:
Asym. Unit : A,B,C
Biol. Unit 1: A,B,C (1x)
Keywords
:
Immune Complex Igg1 Protein-Protein Complex Asymmetry, Immune System
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. Kiyoshi, J. M. M. Caaveiro, T. Kawai, S. Tashiro, T. Ide, Y. Asaoka, K. Hatayama, K. Tsumoto
Structural Basis For Binding Of Human Igg1 To Its High-Affinity Human Receptor Fc Gamma Ri
Nat Commun V. 6 6866 2015
[
close entry info
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Hetero Components
(8, 43)
Info
All Hetero Components
1a: ACETATE ION (ACTa)
1b: ACETATE ION (ACTb)
1c: ACETATE ION (ACTc)
1d: ACETATE ION (ACTd)
1e: ACETATE ION (ACTe)
1f: ACETATE ION (ACTf)
1g: ACETATE ION (ACTg)
1h: ACETATE ION (ACTh)
1i: ACETATE ION (ACTi)
2a: BETA-D-MANNOSE (BMAa)
2b: BETA-D-MANNOSE (BMAb)
2c: BETA-D-MANNOSE (BMAc)
3a: ALPHA-L-FUCOSE (FUCa)
3b: ALPHA-L-FUCOSE (FUCb)
4a: BETA-D-GALACTOSE (GALa)
4b: BETA-D-GALACTOSE (GALb)
5a: GLYCEROL (GOLa)
5b: GLYCEROL (GOLb)
6a: ALPHA-D-MANNOSE (MANa)
6b: ALPHA-D-MANNOSE (MANb)
6c: ALPHA-D-MANNOSE (MANc)
6d: ALPHA-D-MANNOSE (MANd)
6e: ALPHA-D-MANNOSE (MANe)
6f: ALPHA-D-MANNOSE (MANf)
6g: ALPHA-D-MANNOSE (MANg)
7a: N-ACETYL-D-GLUCOSAMINE (NAGa)
7b: N-ACETYL-D-GLUCOSAMINE (NAGb)
7c: N-ACETYL-D-GLUCOSAMINE (NAGc)
7d: N-ACETYL-D-GLUCOSAMINE (NAGd)
7e: N-ACETYL-D-GLUCOSAMINE (NAGe)
7f: N-ACETYL-D-GLUCOSAMINE (NAGf)
7g: N-ACETYL-D-GLUCOSAMINE (NAGg)
7h: N-ACETYL-D-GLUCOSAMINE (NAGh)
7i: N-ACETYL-D-GLUCOSAMINE (NAGi)
7j: N-ACETYL-D-GLUCOSAMINE (NAGj)
7k: N-ACETYL-D-GLUCOSAMINE (NAGk)
7l: N-ACETYL-D-GLUCOSAMINE (NAGl)
8a: ZINC ION (ZNa)
8b: ZINC ION (ZNb)
8c: ZINC ION (ZNc)
8d: ZINC ION (ZNd)
8e: ZINC ION (ZNe)
8f: ZINC ION (ZNf)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ACT
9
Ligand/Ion
ACETATE ION
2
BMA
3
Ligand/Ion
BETA-D-MANNOSE
3
FUC
2
Ligand/Ion
ALPHA-L-FUCOSE
4
GAL
2
Ligand/Ion
BETA-D-GALACTOSE
5
GOL
2
Ligand/Ion
GLYCEROL
6
MAN
7
Ligand/Ion
ALPHA-D-MANNOSE
7
NAG
12
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
8
ZN
6
Ligand/Ion
ZINC ION
[
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]
Sites
(21, 21)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
13: AD4 (SOFTWARE)
14: AD5 (SOFTWARE)
15: AD6 (SOFTWARE)
16: AD7 (SOFTWARE)
17: AD8 (SOFTWARE)
18: AD9 (SOFTWARE)
19: AE1 (SOFTWARE)
20: AE2 (SOFTWARE)
21: AE3 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
HIS A:310 , HIS A:433 , ACT A:513 , ACT A:515
binding site for residue ZN A 510
02
AC2
SOFTWARE
HIS A:268 , GLU A:294 , GLU C:261 , HOH C:454
binding site for residue ZN A 511
03
AC3
SOFTWARE
GLU A:430 , HIS A:435 , HOH A:609 , HOH A:766
binding site for residue ZN A 512
04
AC4
SOFTWARE
HIS A:310 , GLN A:311 , LEU A:314 , ALA A:431 , HIS A:433 , HIS A:435 , ZN A:510 , ACT A:515 , HOH A:609
binding site for residue ACT A 513
05
AC5
SOFTWARE
HIS A:268 , PRO A:271 , TYR A:300 , HOH A:786
binding site for residue ACT A 514
06
AC6
SOFTWARE
HIS A:310 , HIS A:433 , ASN A:434 , HIS A:435 , ZN A:510 , ACT A:513 , HOH A:766
binding site for residue ACT A 515
07
AC7
SOFTWARE
GLU A:272 , SER A:324 , ASN A:325 , LYS A:326 , HOH A:674
binding site for residue ACT A 516
08
AC8
SOFTWARE
GLY A:446 , HOH A:624 , GLU B:272
binding site for residue ACT A 517
09
AC9
SOFTWARE
LYS A:290 , ARG A:301 , NAG A:505
binding site for residue ACT A 518
10
AD1
SOFTWARE
LYS A:370 , ASP A:399 , SER A:400
binding site for residue GOL A 519
11
AD2
SOFTWARE
GLU B:345 , ACT B:512 , HOH B:603 , HOH B:709 , HOH B:743 , HOH B:746
binding site for residue ZN B 510
12
AD3
SOFTWARE
HIS B:310 , HIS B:435 , GLU C:277 , HOH C:528
binding site for residue ZN B 511
13
AD4
SOFTWARE
GLU B:345 , LEU B:432 , HIS B:433 , TYR B:436 , ZN B:510 , HOH B:603 , MAN C:307
binding site for residue ACT B 512
14
AD5
SOFTWARE
ASN A:390 , THR A:411 , LYS B:370 , ASP B:399 , SER B:400 , ASP B:401
binding site for residue GOL B 513
15
AD6
SOFTWARE
HOH A:789 , HIS C:174 , HOH C:484 , HOH C:537 , HOH C:546
binding site for residue ZN C 309
16
AD7
SOFTWARE
ARG C:175
binding site for residue ACT C 310
17
AD8
SOFTWARE
ALA C:196 , SER C:197 , VAL C:198 , THR C:199 , HOH C:406
binding site for residue ACT C 311
18
AD9
SOFTWARE
PHE A:241 , PHE A:243 , PRO A:244 , LYS A:246 , GLU A:258 , THR A:260 , VAL A:264 , ASP A:265 , GLN A:295 , TYR A:296 , ASN A:297 , ARG A:301 , ACT A:518 , HOH A:604 , HOH A:606 , HOH A:616 , HOH A:617 , HOH A:626 , HOH A:627 , HOH A:654 , HOH A:661 , HOH A:722 , HOH A:737 , HOH A:753
binding site for Poly-Saccharide residues NAG A 501 through GAL A 509 bound to ASN A 297
19
AE1
SOFTWARE
PHE B:241 , PHE B:243 , PRO B:244 , LYS B:246 , GLU B:258 , THR B:260 , VAL B:264 , ASP B:265 , GLN B:295 , ASN B:297 , THR B:299 , ARG B:301 , HOH B:618 , HOH B:646 , HOH B:663 , HOH B:687 , HOH B:723 , HOH B:726 , ARG C:175
binding site for Poly-Saccharide residues NAG B 501 through GAL B 509 bound to ASN B 297
20
AE2
SOFTWARE
LEU C:58 , ASN C:59 , GLU C:77 , ASP C:78 , SER C:80
binding site for Poly-Saccharide residues NAG C 301 through NAG C 302 bound to ASN C 59
21
AE3
SOFTWARE
ARG A:355 , ASP A:356 , GLU B:345 , PRO B:346 , GLN B:347 , VAL B:348 , THR B:437 , LYS B:439 , ACT B:512 , HOH B:612 , ASN C:159 , SER C:161 , HOH C:402 , HOH C:403 , HOH C:415 , HOH C:421 , HOH C:441 , HOH C:470
binding site for Poly-Saccharide residues NAG C 303 through MAN C 308 bound to ASN C 159
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
Info
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;
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Exons
(0, 0)
Info
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(0, 0)
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CATH Domains
(0, 0)
Info
all CATH domains
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Sorry, no Info available
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Sorry, no Info available
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Asymmetric Unit 1
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Asym.Unit (143 KB)
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Biol.Unit 1 (133 KB)
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