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4UO1
Asym. Unit
Info
Asym.Unit (537 KB)
Biol.Unit 1 (525 KB)
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(1)
Title
:
STRUCTURE OF THE A_EQUINE_RICHMOND_07 H3 HAEMAGGLUTININ IN COMPLEX WITH 3SLN
Authors
:
S. G. Vachieri, P. J. Collins, L. F. Haire, R. W. Ogrodowicz, S. R. Martin P. A. Walker, X. Xiong, S. J. Gamblin, J. J. Skehel
Date
:
31 May 14 (Deposition) - 23 Jul 14 (Release) - 13 Aug 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.00
Chains
:
Asym. Unit : A,B,C,D,E,F
Biol. Unit 1: A,B,C,D,E,F (1x)
Keywords
:
Viral Protein, Equine, Influenza
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
P. J. Collins, S. G. Vachieri, L. F. Haire, R. W. Ogrodowicz, S. R. Martin, P. A. Walker, X. Xiong, S. J. Gamblin, J. J. Skehel
Recent Evolution Of Equine Influenza And The Origin Of Canine Influenza.
Proc. Natl. Acad. Sci. Usa V. 111 11175 2014
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Hetero Components
(6, 54)
Info
All Hetero Components
1a: BETA-D-MANNOSE (BMAa)
1b: BETA-D-MANNOSE (BMAb)
1c: BETA-D-MANNOSE (BMAc)
1d: BETA-D-MANNOSE (BMAd)
1e: BETA-D-MANNOSE (BMAe)
2a: ALPHA-L-FUCOSE (FUCa)
2b: ALPHA-L-FUCOSE (FUCb)
2c: ALPHA-L-FUCOSE (FUCc)
2d: ALPHA-L-FUCOSE (FUCd)
2e: ALPHA-L-FUCOSE (FUCe)
3a: BETA-D-GALACTOSE (GALa)
3b: BETA-D-GALACTOSE (GALb)
3c: BETA-D-GALACTOSE (GALc)
4a: ALPHA-D-MANNOSE (MANa)
4b: ALPHA-D-MANNOSE (MANb)
4c: ALPHA-D-MANNOSE (MANc)
4d: ALPHA-D-MANNOSE (MANd)
4e: ALPHA-D-MANNOSE (MANe)
4f: ALPHA-D-MANNOSE (MANf)
5a: N-ACETYL-D-GLUCOSAMINE (NAGa)
5aa: N-ACETYL-D-GLUCOSAMINE (NAGaa)
5ab: N-ACETYL-D-GLUCOSAMINE (NAGab)
5ac: N-ACETYL-D-GLUCOSAMINE (NAGac)
5ad: N-ACETYL-D-GLUCOSAMINE (NAGad)
5ae: N-ACETYL-D-GLUCOSAMINE (NAGae)
5af: N-ACETYL-D-GLUCOSAMINE (NAGaf)
5b: N-ACETYL-D-GLUCOSAMINE (NAGb)
5c: N-ACETYL-D-GLUCOSAMINE (NAGc)
5d: N-ACETYL-D-GLUCOSAMINE (NAGd)
5e: N-ACETYL-D-GLUCOSAMINE (NAGe)
5f: N-ACETYL-D-GLUCOSAMINE (NAGf)
5g: N-ACETYL-D-GLUCOSAMINE (NAGg)
5h: N-ACETYL-D-GLUCOSAMINE (NAGh)
5i: N-ACETYL-D-GLUCOSAMINE (NAGi)
5j: N-ACETYL-D-GLUCOSAMINE (NAGj)
5k: N-ACETYL-D-GLUCOSAMINE (NAGk)
5l: N-ACETYL-D-GLUCOSAMINE (NAGl)
5m: N-ACETYL-D-GLUCOSAMINE (NAGm)
5n: N-ACETYL-D-GLUCOSAMINE (NAGn)
5o: N-ACETYL-D-GLUCOSAMINE (NAGo)
5p: N-ACETYL-D-GLUCOSAMINE (NAGp)
5q: N-ACETYL-D-GLUCOSAMINE (NAGq)
5r: N-ACETYL-D-GLUCOSAMINE (NAGr)
5s: N-ACETYL-D-GLUCOSAMINE (NAGs)
5t: N-ACETYL-D-GLUCOSAMINE (NAGt)
5u: N-ACETYL-D-GLUCOSAMINE (NAGu)
5v: N-ACETYL-D-GLUCOSAMINE (NAGv)
5w: N-ACETYL-D-GLUCOSAMINE (NAGw)
5x: N-ACETYL-D-GLUCOSAMINE (NAGx)
5y: N-ACETYL-D-GLUCOSAMINE (NAGy)
5z: N-ACETYL-D-GLUCOSAMINE (NAGz)
6a: O-SIALIC ACID (SIAa)
6b: O-SIALIC ACID (SIAb)
6c: O-SIALIC ACID (SIAc)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
BMA
5
Ligand/Ion
BETA-D-MANNOSE
2
FUC
5
Ligand/Ion
ALPHA-L-FUCOSE
3
GAL
3
Ligand/Ion
BETA-D-GALACTOSE
4
MAN
6
Ligand/Ion
ALPHA-D-MANNOSE
5
NAG
32
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
6
SIA
3
Ligand/Ion
O-SIALIC ACID
[
close Hetero Component info
]
Sites
(23, 23)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ASN C:38 , THR C:40 , ARG C:135 , ARG C:141 , ALA C:144 , NAG C:632
BINDING SITE FOR RESIDUE NAG C 631
02
AC2
SOFTWARE
ARG C:135 , NAG C:631 , ASN D:49
BINDING SITE FOR RESIDUE NAG C 632
03
AC3
SOFTWARE
NAG D:201
BINDING SITE FOR RESIDUE FUC D 200
04
AC4
SOFTWARE
NAG D:201
BINDING SITE FOR RESIDUE NAG D 202
05
AC5
SOFTWARE
ASN A:8 , ARG F:25 , TYR F:26 , THR F:32 , GLY F:33 , GLN F:34
BINDING SITE FOR POLY-SACCHARIDE RESIDUES FUC A 600 THROUGH BMA A 603 BOUND TO ASN A 8
06
AC6
SOFTWARE
ASN A:38 , ALA A:39 , THR A:40
BINDING SITE FOR POLY-SACCHARIDE RESIDUES NAG A 631 THROUGH BMA A 633 BOUND TO ASN A 38
07
AC7
SOFTWARE
ASN A:53 , ILE A:274 , ILE A:276
BINDING SITE FOR MONO-SACCHARIDE NAG A 411 BOUND TO ASN A 53
08
AC8
SOFTWARE
ASN A:63
BINDING SITE FOR POLY-SACCHARIDE RESIDUES NAG A 421 THROUGH NAG A 422 BOUND TO ASN A 63
09
AC9
SOFTWARE
ASN A:165 , ILE A:242 , MET A:244 , HOH A:2020 , SER E:219 , PRO E:221 , TRP E:222
BINDING SITE FOR POLY-SACCHARIDE RESIDUES NAG A 431 THROUGH MAN A 437 BOUND TO ASN A 165
10
BC1
SOFTWARE
ASN A:285 , ASN A:298 , HOH A:2016 , GLU B:69
BINDING SITE FOR POLY-SACCHARIDE RESIDUES NAG A 441 THROUGH NAG A 442 BOUND TO ASN A 285
11
BC2
SOFTWARE
ALA B:147 , GLY B:150 , SER B:151 , ARG B:153 , ASN B:154 , THR B:156
BINDING SITE FOR POLY-SACCHARIDE RESIDUES FUC B 200 THROUGH NAG B 201 BOUND TO ASN B 154
12
BC3
SOFTWARE
ASN C:53 , ASP C:275
BINDING SITE FOR POLY-SACCHARIDE RESIDUES NAG C 411 THROUGH NAG C 412 BOUND TO ASN C 53
13
BC4
SOFTWARE
SER A:219 , ARG A:220 , PRO A:221 , TRP A:222 , ASN C:165 , MET C:244
BINDING SITE FOR POLY-SACCHARIDE RESIDUES NAG C 431 THROUGH MAN C 437 BOUND TO ASN C 165
14
BC5
SOFTWARE
ALA D:147 , GLY D:150 , SER D:151 , ASN D:154 , FUC D:200 , NAG D:202
BINDING SITE FOR MONO-SACCHARIDE NAG D 201 BOUND TO ASN D 154
15
BC6
SOFTWARE
THR B:32 , GLY B:33 , ASN E:8
BINDING SITE FOR POLY-SACCHARIDE RESIDUES FUC E 600 THROUGH NAG E 602 BOUND TO ASN E 8
16
BC7
SOFTWARE
ALA E:21 , ASN E:22
BINDING SITE FOR MONO-SACCHARIDE NAG E 621 BOUND TO ASN E 22
17
BC8
SOFTWARE
ASN E:38 , ALA E:39 , THR E:40
BINDING SITE FOR POLY-SACCHARIDE RESIDUES NAG E 631 THROUGH NAG E 632 BOUND TO ASN E 38
18
BC9
SOFTWARE
SER C:219 , PRO C:221 , TRP C:222 , ASN E:165 , MET E:244
BINDING SITE FOR POLY-SACCHARIDE RESIDUES NAG E 431 THROUGH MAN E 437 BOUND TO ASN E 165
19
CC1
SOFTWARE
PRO E:284 , ASN E:285 , ASN E:298 , GLU F:69
BINDING SITE FOR MONO-SACCHARIDE NAG E 441 BOUND TO ASN E 285
20
CC2
SOFTWARE
ASN A:159 , ALA F:147 , GLY F:150 , ARG F:153 , ASN F:154 , THR F:156
BINDING SITE FOR POLY-SACCHARIDE RESIDUES FUC F 200 THROUGH NAG F 202 BOUND TO ASN F 154
21
CC3
SOFTWARE
TYR A:98 , ARG A:135 , SER A:136 , GLY A:137 , TRP A:153 , HIS A:183 , GLU A:190 , LEU A:194 , GLN A:226
BINDING SITE FOR POLY-SACCHARIDE RESIDUES SIA A 701 THROUGH GAL A 702
22
CC4
SOFTWARE
TYR C:98 , ARG C:135 , SER C:136 , GLY C:137 , TRP C:153 , HIS C:183 , GLU C:190 , LEU C:194 , GLN C:226
BINDING SITE FOR POLY-SACCHARIDE RESIDUES SIA C 701 THROUGH NAG C 703
23
CC5
SOFTWARE
TYR C:98 , ARG C:135 , SER C:136 , GLY C:137 , TRP C:153 , HIS C:183 , GLU C:190 , LEU C:194 , GLN C:226 , TYR E:98 , ARG E:135 , SER E:136 , GLY E:137 , GLN E:226
BINDING SITE FOR POLY-SACCHARIDE RESIDUES SIA E 701 THROUGH NAG E 703
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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Sorry, no Info available
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PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
;
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End label:
Sorry, no Info available
[
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
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Info
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Sorry, no Info available
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CATH Domains
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Info
all CATH domains
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Sorry, no Info available
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Pfam Domains
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Info
all PFAM domains
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Sorry, no Info available
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Atom Selection
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