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4UNX
Asym. Unit
Info
Asym.Unit (531 KB)
Biol.Unit 1 (520 KB)
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(1)
Title
:
STRUCTURE OF THE A_EQUINE_NEWMARKET_2_93 H3 HAEMAGGLUTININ IN COMPLEX WITH 3SLN
Authors
:
S. G. Vachieri, P. J. Collins, L. F. Haire, R. W. Ogrodowicz, S. R. Martin P. A. Walker, X. Xiong, S. J. Gamblin, J. J. Skehel
Date
:
31 May 14 (Deposition) - 23 Jul 14 (Release) - 13 Aug 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.20
Chains
:
Asym. Unit : A,B,C,D,E,F
Biol. Unit 1: A,B,C,D,E,F (1x)
Keywords
:
Viral Protein, Equine, Canine, Influenza, Haemagglutinin
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
P. J. Collins, S. G. Vachieri, L. F. Haire, R. W. Ogrodowicz, S. R. Martin, P. A. Walker, X. Xiong, S. J. Gamblin, J. J. Skehel
Recent Evolution Of Equine Influenza And The Origin Of Canine Influenza.
Proc. Natl. Acad. Sci. Usa V. 111 11175 2014
[
close entry info
]
Hetero Components
(6, 42)
Info
All Hetero Components
1a: BETA-D-MANNOSE (BMAa)
1b: BETA-D-MANNOSE (BMAb)
1c: BETA-D-MANNOSE (BMAc)
2a: BETA-L-FUCOSE (FUCa)
2b: BETA-L-FUCOSE (FUCb)
2c: BETA-L-FUCOSE (FUCc)
3a: BETA-D-GALACTOSE (GALa)
4a: ALPHA-D-MANNOSE (MANa)
4b: ALPHA-D-MANNOSE (MANb)
4c: ALPHA-D-MANNOSE (MANc)
4d: ALPHA-D-MANNOSE (MANd)
4e: ALPHA-D-MANNOSE (MANe)
5a: N-ACETYL-D-GLUCOSAMINE (NAGa)
5aa: N-ACETYL-D-GLUCOSAMINE (NAGaa)
5b: N-ACETYL-D-GLUCOSAMINE (NAGb)
5c: N-ACETYL-D-GLUCOSAMINE (NAGc)
5d: N-ACETYL-D-GLUCOSAMINE (NAGd)
5e: N-ACETYL-D-GLUCOSAMINE (NAGe)
5f: N-ACETYL-D-GLUCOSAMINE (NAGf)
5g: N-ACETYL-D-GLUCOSAMINE (NAGg)
5h: N-ACETYL-D-GLUCOSAMINE (NAGh)
5i: N-ACETYL-D-GLUCOSAMINE (NAGi)
5j: N-ACETYL-D-GLUCOSAMINE (NAGj)
5k: N-ACETYL-D-GLUCOSAMINE (NAGk)
5l: N-ACETYL-D-GLUCOSAMINE (NAGl)
5m: N-ACETYL-D-GLUCOSAMINE (NAGm)
5n: N-ACETYL-D-GLUCOSAMINE (NAGn)
5o: N-ACETYL-D-GLUCOSAMINE (NAGo)
5p: N-ACETYL-D-GLUCOSAMINE (NAGp)
5q: N-ACETYL-D-GLUCOSAMINE (NAGq)
5r: N-ACETYL-D-GLUCOSAMINE (NAGr)
5s: N-ACETYL-D-GLUCOSAMINE (NAGs)
5t: N-ACETYL-D-GLUCOSAMINE (NAGt)
5u: N-ACETYL-D-GLUCOSAMINE (NAGu)
5v: N-ACETYL-D-GLUCOSAMINE (NAGv)
5w: N-ACETYL-D-GLUCOSAMINE (NAGw)
5x: N-ACETYL-D-GLUCOSAMINE (NAGx)
5y: N-ACETYL-D-GLUCOSAMINE (NAGy)
5z: N-ACETYL-D-GLUCOSAMINE (NAGz)
6a: O-SIALIC ACID (SIAa)
6b: O-SIALIC ACID (SIAb)
6c: O-SIALIC ACID (SIAc)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
BMA
3
Ligand/Ion
BETA-D-MANNOSE
2
FUC
3
Ligand/Ion
BETA-L-FUCOSE
3
GAL
1
Ligand/Ion
BETA-D-GALACTOSE
4
MAN
5
Ligand/Ion
ALPHA-D-MANNOSE
5
NAG
27
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
6
SIA
3
Ligand/Ion
O-SIALIC ACID
[
close Hetero Component info
]
Sites
(20, 20)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ASN A:38
BINDING SITE FOR RESIDUE NAG A 401
02
AC2
SOFTWARE
ASN A:165 , THR A:167
BINDING SITE FOR RESIDUE NAG A 431
03
AC3
SOFTWARE
ASN C:38 , ALA C:39 , THR C:318 , LEU D:52
BINDING SITE FOR RESIDUE NAG C 401
04
AC4
SOFTWARE
ASN C:63 , SER C:92
BINDING SITE FOR RESIDUE NAG C 421
05
AC5
SOFTWARE
TYR C:98 , GLY C:135 , SER C:136 , GLY C:137 , TRP C:153 , HIS C:183 , PRO C:185 , SER C:186 , GLU C:190 , GLN C:226
BINDING SITE FOR RESIDUE SIA C 701
06
AC6
SOFTWARE
ASN E:38
BINDING SITE FOR RESIDUE NAG E 401
07
AC7
SOFTWARE
TYR E:98 , GLY E:135 , SER E:136 , GLY E:137 , TRP E:153 , HIS E:183 , GLU E:190 , LEU E:194 , GLN E:226
BINDING SITE FOR RESIDUE SIA E 701
08
AC8
SOFTWARE
ASN A:53 , ASN A:54 , ILE A:274 , THR A:276
BINDING SITE FOR POLY-SACCHARIDE RESIDUES NAG A 411 THROUGH NAG A 412
09
AC9
SOFTWARE
ASN A:63
BINDING SITE FOR POLY-SACCHARIDE RESIDUES NAG A 421 THROUGH NAG A 422
10
BC1
SOFTWARE
ASN A:285 , VAL A:297 , GLU B:69
BINDING SITE FOR POLY-SACCHARIDE RESIDUES NAG A 441 THROUGH MAN A 445
11
BC2
SOFTWARE
TYR A:98 , GLY A:135 , SER A:136 , GLY A:137 , ASP A:145 , LYS A:189 , GLU A:190 , LEU A:194 , GLN A:226 , LYS A:264 , NAG A:441 , GLU B:69
BINDING SITE FOR POLY-SACCHARIDE RESIDUES SIA A 701 THROUGH NAG A 703
12
BC3
SOFTWARE
TRP A:180 , LYS A:189 , GLU A:190 , GLY A:200 , THR A:203 , THR A:212 , VAL A:213 , GLN A:226 , SER A:247 , ASN A:248 , GLY A:249 , ASN A:250 , LYS A:264 , SIA A:701 , GLY B:150 , SER B:151 , ARG B:153 , ASN B:154 , ILE E:217 , GLY E:218
BINDING SITE FOR POLY-SACCHARIDE RESIDUES NAG B 201 THROUGH FUC B 202
13
BC4
SOFTWARE
ASN C:53 , ASN C:54 , ILE C:274 , ASP C:275 , THR C:276
BINDING SITE FOR POLY-SACCHARIDE RESIDUES NAG C 411 THROUGH NAG C 412
14
BC5
SOFTWARE
SER A:219 , TRP A:222 , ASN C:165 , MET C:244
BINDING SITE FOR POLY-SACCHARIDE RESIDUES NAG C 431 THROUGH NAG C 432
15
BC6
SOFTWARE
ASN C:285 , VAL C:297 , ASN C:298 , LYS C:299
BINDING SITE FOR POLY-SACCHARIDE RESIDUES NAG C 441 THROUGH MAN C 445
16
BC7
SOFTWARE
ILE A:217 , GLY A:218 , TRP C:180 , GLY C:200 , THR C:203 , THR C:212 , VAL C:213 , SER C:247 , ASN C:248 , GLY C:249 , LYS C:299 , NAG C:441 , ARG D:153 , ASN D:154
BINDING SITE FOR POLY-SACCHARIDE RESIDUES NAG D 201 THROUGH FUC D 202
17
BC8
SOFTWARE
ASN E:53 , ILE E:274
BINDING SITE FOR POLY-SACCHARIDE RESIDUES NAG E 411 THROUGH NAG E 412
18
BC9
SOFTWARE
SER C:219 , ASN E:165 , ILE E:242 , MET E:244
BINDING SITE FOR POLY-SACCHARIDE RESIDUES NAG E 431 THROUGH NAG E 432
19
CC1
SOFTWARE
LYS A:140 , GLY A:142 , SER A:143 , ASN E:285 , ASN E:298 , GLU F:69
BINDING SITE FOR POLY-SACCHARIDE RESIDUES NAG E 441 THROUGH MAN E 445
20
CC2
SOFTWARE
LYS A:140 , SER A:143 , ILE C:217 , ILE E:182 , GLY E:200 , THR E:203 , THR E:212 , VAL E:213 , SER E:247 , ASN E:248 , GLY E:249 , NAG E:441 , GLU F:69 , GLY F:150 , SER F:151 , ASN F:154 , THR F:156
BINDING SITE FOR POLY-SACCHARIDE RESIDUES NAG F 201 THROUGH FUC F 202
[
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
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PROSITE Patterns/Profiles
(0, 0)
Info
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;
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End label:
Sorry, no Info available
[
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Exons
(0, 0)
Info
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(0, 0)
Info
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Sorry, no Info available
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CATH Domains
(0, 0)
Info
all CATH domains
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Sorry, no Info available
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Pfam Domains
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Info
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Sorry, no Info available
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Asymmetric Unit 1
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select all 'ALA' residues (Alanines) in chain 'A'
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select residue range 5 to 10 in all chains
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select residue range 5 to 10 in chain 'A'
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