PLEASE WAIT...
Getting 'Biological Unit' information from database.
PLEASE WAIT...
Getting 'Hetero Component' information from database.
PLEASE WAIT...
Getting 'Site' information from database.
PLEASE WAIT...
No precomputed SNP/Variant structure found.
Calculating the structure may take several minutes.
PLEASE WAIT...
Getting 'PROSITE' information from database.
PLEASE WAIT...
Getting 'Exon' information from database.
4UFA
Asym. Unit
Info
Asym.Unit (227 KB)
Biol.Unit 1 (113 KB)
Biol.Unit 2 (111 KB)
(using Jmol or JSmol)
spin
show selected part
auto zoom/center
Standard Views
(
Basic
|
Advanced
Interface
)
(
Basic
|
Advanced
Interface
)
Help
(1)
Title
:
CRYSTAL STRUCTURE OF THE ANGIOTENSIN-1 CONVERTING ENZYME N-DOMAIN IN COMPLEX WITH AC-SD
Authors
:
G. Masuyer, R. G. Douglas, E. D. Sturrock, K. R. Acharya
Date
:
16 Mar 15 (Deposition) - 07 Oct 15 (Release) - 07 Oct 15 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.80
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Hydrolase, Angiotensin-Converting Enzyme, Metalloprotease, N-Acetyl- Ser-Asp-Lys-Pro
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
G. Masuyer, R. G. Douglas, E. D. Sturrock, K. R. Acharya
Structural Basis Of Ac-Sdkp Hydrolysis By Angiotensin-I Converting Enzyme
Sci. Rep. V. 5 13742 2015
[
close entry info
]
Hetero Components
(9, 28)
Info
All Hetero Components
1a: ASPARTIC ACID (ASPa)
1b: ASPARTIC ACID (ASPb)
2a: BETA-D-MANNOSE (BMAa)
2b: BETA-D-MANNOSE (BMAb)
3a: CHLORIDE ION (CLa)
3b: CHLORIDE ION (CLb)
4a: ALPHA-L-FUCOSE (FUCa)
4b: ALPHA-L-FUCOSE (FUCb)
5a: N-ACETYL-D-GLUCOSAMINE (NAGa)
5b: N-ACETYL-D-GLUCOSAMINE (NAGb)
5c: N-ACETYL-D-GLUCOSAMINE (NAGc)
5d: N-ACETYL-D-GLUCOSAMINE (NAGd)
5e: N-ACETYL-D-GLUCOSAMINE (NAGe)
5f: N-ACETYL-D-GLUCOSAMINE (NAGf)
5g: N-ACETYL-D-GLUCOSAMINE (NAGg)
5h: N-ACETYL-D-GLUCOSAMINE (NAGh)
5i: N-ACETYL-D-GLUCOSAMINE (NAGi)
6a: HEXAETHYLENE GLYCOL (P6Ga)
6b: HEXAETHYLENE GLYCOL (P6Gb)
6c: HEXAETHYLENE GLYCOL (P6Gc)
7a: DI(HYDROXYETHYL)ETHER (PEGa)
7b: DI(HYDROXYETHYL)ETHER (PEGb)
7c: DI(HYDROXYETHYL)ETHER (PEGc)
7d: DI(HYDROXYETHYL)ETHER (PEGd)
8a: N-ACETYL-SERINE (SACa)
8b: N-ACETYL-SERINE (SACb)
9a: ZINC ION (ZNa)
9b: ZINC ION (ZNb)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ASP
2
Mod. Amino Acid
ASPARTIC ACID
2
BMA
2
Ligand/Ion
BETA-D-MANNOSE
3
CL
2
Ligand/Ion
CHLORIDE ION
4
FUC
2
Ligand/Ion
ALPHA-L-FUCOSE
5
NAG
9
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
6
P6G
3
Ligand/Ion
HEXAETHYLENE GLYCOL
7
PEG
4
Ligand/Ion
DI(HYDROXYETHYL)ETHER
8
SAC
2
Ligand/Ion
N-ACETYL-SERINE
9
ZN
2
Ligand/Ion
ZINC ION
[
close Hetero Component info
]
Sites
(19, 19)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
HIS A:361 , HIS A:365 , GLU A:389 , HOH A:2300 , HOH A:2301
BINDING SITE FOR RESIDUE ZN A1001
02
AC2
SOFTWARE
TYR A:202 , PRO A:385 , ARG A:500 , HOH A:2166
BINDING SITE FOR RESIDUE CL A1002
03
AC3
SOFTWARE
ARG A:96 , PHE A:191
BINDING SITE FOR RESIDUE PEG A1200
04
AC4
SOFTWARE
PHE A:33 , ASP A:342 , ARG A:344 , HOH A:2016
BINDING SITE FOR RESIDUE PEG A1201
05
AC5
SOFTWARE
LEU A:32 , SER A:39 , ALA A:334 , TYR A:369
BINDING SITE FOR RESIDUE P6G A1202
06
AC6
SOFTWARE
HIS B:361 , HIS B:365 , GLU B:389 , HOH B:2234 , HOH B:2235
BINDING SITE FOR RESIDUE ZN B1001
07
AC7
SOFTWARE
TYR B:202 , PRO B:497 , ARG B:500 , HOH B:2125
BINDING SITE FOR RESIDUE CL B1002
08
AC8
SOFTWARE
TYR A:465 , HOH A:2336 , ARG B:453 , TYR B:465
BINDING SITE FOR RESIDUE PEG B1201
09
AC9
SOFTWARE
ARG A:295 , GLU B:299 , HOH B:2330
BINDING SITE FOR RESIDUE PEG B1202
10
BC1
SOFTWARE
GLN A:286 , GLY A:287 , HIS A:292 , GLN B:286 , GLY B:287 , TRP B:288 , HIS B:292
BINDING SITE FOR RESIDUE P6G B1203
11
BC2
SOFTWARE
ALA B:334 , TYR B:369 , GLU B:389 , HOH B:2216
BINDING SITE FOR RESIDUE P6G B1204
12
BC3
SOFTWARE
ASN A:45 , THR A:47 , GLU A:49 , ASN A:50 , ARG A:326
BINDING SITE FOR POLY-SACCHARIDE RESIDUES NAG A1102 THROUGH NAG A1103 BOUND TO ASN A 45
13
BC4
SOFTWARE
PHE A:10 , SER A:11 , ASN A:416 , GLU A:522 , PRO A:524 , GLN A:527 , HOH A:2382 , HOH A:2443
BINDING SITE FOR POLY-SACCHARIDE RESIDUES NAG A1104 THROUGH FUC A1107 BOUND TO ASN A 416
14
BC5
SOFTWARE
ASN A:480 , THR A:482 , ARG B:245 , GLU B:596
BINDING SITE FOR MONO-SACCHARIDE NAG A1100 BOUND TO ASN A 480
15
BC6
SOFTWARE
ASN B:45 , THR B:47 , GLU B:49 , ASN B:50
BINDING SITE FOR MONO-SACCHARIDE NAG B1102 BOUND TO ASN B 45
16
BC7
SOFTWARE
ASN B:416 , GLU B:522 , PRO B:524 , GLN B:527 , HOH B:2255
BINDING SITE FOR POLY-SACCHARIDE RESIDUES NAG B1104 THROUGH BMA B1106 BOUND TO ASN B 416
17
BC8
SOFTWARE
ARG A:245 , GLU A:596 , ASN B:480 , THR B:482 , HOH B:2329
BINDING SITE FOR POLY-SACCHARIDE RESIDUES NAG B1100 THROUGH FUC B1101 BOUND TO ASN B 480
18
BC9
SOFTWARE
GLN A:259 , HIS A:331 , ALA A:332 , HIS A:361 , GLU A:362 , PHE A:435 , LYS A:489 , HIS A:491 , TYR A:498 , TYR A:501 , HOH A:2229 , HOH A:2298 , HOH A:2301
BINDING SITE FOR DI-PEPTIDE SAC A1301 AND ASP A1302
19
CC1
SOFTWARE
GLN B:259 , HIS B:331 , ALA B:332 , HIS B:361 , GLU B:362 , LYS B:489 , HIS B:491 , TYR B:498 , TYR B:501 , HOH B:2168 , HOH B:2169 , HOH B:2232 , HOH B:2234
BINDING SITE FOR DI-PEPTIDE SAC B1301 AND ASP B1302
[
close Site info
]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
Select:
Label:
Sorry, no Info available
[
close SNP/Variant info
]
PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
;
View:
Select:
Label:
End label:
Sorry, no Info available
[
close PROSITE info
]
Exons
(0, 0)
Info
All Exons
View:
Select:
Label:
All Exon Boundaries
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(0, 0)
Info
All SCOP Domains
View:
Select:
Label:
Sorry, no Info available
[
close SCOP info
]
CATH Domains
(0, 0)
Info
all CATH domains
View:
Select:
Label:
Sorry, no Info available
[
close CATH info
]
Pfam Domains
(0, 0)
Info
all PFAM domains
View:
Select:
Label:
Sorry, no Info available
[
close Pfam info
]
Atom Selection
(currently selected atoms:
all
)
Protein
Nucleic
Backbone
Sidechain
Hetero
Ligand
Solvent
All Atoms
Protein & NOT Variant
Protein & NOT Site
Protein & NOT PROSITE
Chain A
Chain B
Asymmetric Unit 1
Rendering
(selected part)
Molecule Coloring
(selected part)
by Chain (Asym. Unit)
by Chain (Biol. Unit)
by Secondary Structure
by Atom (CPK)
by SCOP Domain
by CATH Domain
by Pfam Domain
by Asymmetric Unit
by Exon
by Amino Acid
by Nucleotide
by Temperature
by Charge
by Rainbow (Group)
by Custom Color
Background Coloring
Choose
molecule
background
color...
[
close
]
RGB value
(e.g.: "#3cb371" or "60,179,113")
Stereo
Graphics Window
x
pixel
Miscellaneous
Script
Example Commands
Example Command
Action
select :A, :C
select chains 'A' and 'C'
select [ALA]:A
select all 'ALA' residues (Alanines) in chain 'A'
select 5-10
select residue range 5 to 10 in all chains
select 5-10:A
select residue range 5 to 10 in chain 'A'
select protein & not helix & not sheet
select non-helix/non-sheet protein parts
set fontsize 20
set label size to 20 (allowed range: 1-58)
ssbonds 100
show SS bonds with a radius of 100 units (=0.4Å)
wireframe 100
show bonds with a radius of 100 units (=0.4Å)
[
close Script example commands
]
Log
Note:
In this "Basic Interface" any change in the selection of a pulldown menu automatically triggers an action (one-step mechanism).
View and selection are coupled in the structure specific controls (e.g. "Hetero","PROSITE") .
Note:
In this "Advanced Interface" any change in the selection of a pulldown menu only sets the target for the corresponding control buttons (two-step mechanism).
View and selection are set independently in the structure specific controls (e.g. "Hetero","PROSITE") .
QuickSearch:
by PDB,NDB,UniProt,PROSITE Code or
Search Term(s)
Show PDB file:
Asym.Unit (227 KB)
Header - Asym.Unit
Biol.Unit 1 (113 KB)
Header - Biol.Unit 1
Biol.Unit 2 (111 KB)
Header - Biol.Unit 2
Plain Text
HTML (compressed size)
use JSmol [Javascript]
use Jmol [Java applet]
Upload:
Select a local file
OR
Enter a remote file address
You can upload any molecular structure file format that is recognized by Jmol,
e.g.: PDB, mmCif, CIF, CML, MOL, XYZ
(also compressed with 'gzip', see the
Jmol documentation
for a complete list)
JenaLib Atlas Page
|
Sequence/Alignment View
4UFA
Jmol Script Commands
|
Jmol Color Schemes
|
Jmol Mouse Manual
|
Jmol Wiki
controls:
collapse
expand
Home
JenaLib
Jmol Scripting
Contact
Help