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Getting 'Biological Unit' information from database.
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4UF7
Biol. Unit 2
Info
Asym.Unit (408 KB)
Biol.Unit 1 (201 KB)
Biol.Unit 2 (203 KB)
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(1)
Title
:
GHANAIAN HENIPAVIRUS (GH-M74A) ATTACHMENT GLYCOPROTEIN IN COMPLEX WITH HUMAN EPHRINB2
Authors
:
B. Lee, O. Pernet, A. A. Ahmed, A. Zeltina, S. M. Beaty, T. A. Bowden
Date
:
13 Mar 15 (Deposition) - 01 Apr 15 (Release) - 13 May 15 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.70
Chains
:
Asym. Unit : A,B,C,E
Biol. Unit 1: B,C (1x)
Biol. Unit 2: A,E (1x)
Keywords
:
Viral Protein-Immune System Complex, Gh-M74A, Hendra Virus, Nipah Virus, Viral Attachment, Glycoprotein, Paramyxovirus, Ghv-G, Niv-G, Hev-G, Hnv, Hnv-G
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
B. Lee, O. Pernet, A. A. Ahmed, A. Zeltina, S. M. Beaty, T. A. Bowden
Molecular Recognition Of Human Ephrinb2 Cell Surface Receptor By An Emergent African Henipavirus.
Proc. Natl. Acad. Sci. Usa V. 112 E2156 2015
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Hetero Components
(3, 17)
Info
All Hetero Components
1a: ACETATE ION (ACTa)
1b: ACETATE ION (ACTb)
1c: ACETATE ION (ACTc)
1d: ACETATE ION (ACTd)
1e: ACETATE ION (ACTe)
1f: ACETATE ION (ACTf)
1g: ACETATE ION (ACTg)
2a: CHLORIDE ION (CLa)
2b: CHLORIDE ION (CLb)
3a: N-ACETYL-D-GLUCOSAMINE (NAGa)
3b: N-ACETYL-D-GLUCOSAMINE (NAGb)
3c: N-ACETYL-D-GLUCOSAMINE (NAGc)
3d: N-ACETYL-D-GLUCOSAMINE (NAGd)
3e: N-ACETYL-D-GLUCOSAMINE (NAGe)
3f: N-ACETYL-D-GLUCOSAMINE (NAGf)
3g: N-ACETYL-D-GLUCOSAMINE (NAGg)
3h: N-ACETYL-D-GLUCOSAMINE (NAGh)
3i: N-ACETYL-D-GLUCOSAMINE (NAGi)
3j: N-ACETYL-D-GLUCOSAMINE (NAGj)
3k: N-ACETYL-D-GLUCOSAMINE (NAGk)
4a: SULFATE ION (SO4a)
4b: SULFATE ION (SO4b)
4c: SULFATE ION (SO4c)
4d: SULFATE ION (SO4d)
4e: SULFATE ION (SO4e)
4f: SULFATE ION (SO4f)
4g: SULFATE ION (SO4g)
4h: SULFATE ION (SO4h)
4i: SULFATE ION (SO4i)
4j: SULFATE ION (SO4j)
4k: SULFATE ION (SO4k)
4l: SULFATE ION (SO4l)
4m: SULFATE ION (SO4m)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ACT
5
Ligand/Ion
ACETATE ION
2
CL
-1
Ligand/Ion
CHLORIDE ION
3
NAG
6
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
4
SO4
6
Ligand/Ion
SULFATE ION
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Sites
(23, 23)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC7 (SOFTWARE)
07: BC1 (SOFTWARE)
08: BC2 (SOFTWARE)
09: BC6 (SOFTWARE)
10: BC7 (SOFTWARE)
11: BC8 (SOFTWARE)
12: BC9 (SOFTWARE)
13: CC1 (SOFTWARE)
14: CC2 (SOFTWARE)
15: CC4 (SOFTWARE)
16: CC5 (SOFTWARE)
17: CC6 (SOFTWARE)
18: CC7 (SOFTWARE)
19: CC8 (SOFTWARE)
20: CC9 (SOFTWARE)
21: DC3 (SOFTWARE)
22: DC5 (SOFTWARE)
23: DC6 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ARG A:218 , ARG A:592 , ARG A:599 , HOH A:2409
BINDING SITE FOR RESIDUE SO4 A1618
02
AC2
SOFTWARE
ARG A:218 , TRP A:564 , ARG A:592 , HOH A:2411 , HOH A:2412
BINDING SITE FOR RESIDUE SO4 A1619
03
AC3
SOFTWARE
ASN A:305 , GLU A:306 , ARG A:336 , LYS A:339 , ARG B:427 , ASN B:428
BINDING SITE FOR RESIDUE SO4 A1620
04
AC4
SOFTWARE
HIS A:384 , LYS A:385 , HOH A:2196 , HOH A:2202
BINDING SITE FOR RESIDUE SO4 A1621
05
AC5
SOFTWARE
LYS A:393 , LYS A:394 , SER A:395 , HOH A:2222
BINDING SITE FOR RESIDUE SO4 A1622
06
AC7
SOFTWARE
ARG A:431 , ASP A:432 , GLU B:370 , SER B:371 , HOH B:2146
BINDING SITE FOR RESIDUE SO4 B1619
07
BC1
SOFTWARE
ACT A:1627 , ASN B:396 , SER B:398 , ARG B:399 , THR B:400 , ASP B:401 , ASP B:402 , NAG B:1627 , HOH B:2175 , HOH B:2191
BINDING SITE FOR RESIDUE SO4 B1622
08
BC2
SOFTWARE
ASN A:235 , ARG A:237 , SER A:250 , TYR A:252 , LYS A:261 , GLU A:264 , HIS A:296 , SER A:297 , HOH A:2039 , HOH A:2087 , HOH A:2173
BINDING SITE FOR RESIDUE SO4 A1623
09
BC6
SOFTWARE
ARG A:284 , SER A:285 , HIS A:337 , HOH A:2072
BINDING SITE FOR RESIDUE ACT A1624
10
BC7
SOFTWARE
PHE A:505 , LYS A:537 , SER A:538 , GLU A:539 , HOH A:2415
BINDING SITE FOR RESIDUE ACT A1625
11
BC8
SOFTWARE
PRO A:212 , THR A:213 , ILE A:214 , PHE A:559
BINDING SITE FOR RESIDUE ACT A1626
12
BC9
SOFTWARE
PRO A:493 , TYR A:494 , GLN A:554 , ILE A:555 , HOH A:2376 , ASN B:396 , SO4 B:1622 , NAG B:1627 , HOH B:2180
BINDING SITE FOR RESIDUE ACT A1627
13
CC1
SOFTWARE
SER A:501 , HOH A:2363 , HOH A:2365 , ASP E:110 , ILE E:111 , LYS E:112
BINDING SITE FOR RESIDUE ACT E1173
14
CC2
SOFTWARE
TYR B:295 , CYS B:311 , HIS B:331 , VAL B:333 , ILE B:343 , HOH B:2072 , GLU E:34
BINDING SITE FOR RESIDUE ACT B1625
15
CC4
SOFTWARE
ARG A:381 , SER A:414 , PRO A:415 , GLN A:416 , HIS A:417
BINDING SITE FOR RESIDUE CL A1628
16
CC5
SOFTWARE
ASN A:207 , SER A:209
BINDING SITE FOR MONO-SACCHARIDE NAG A1632 BOUND TO ASN A 207
17
CC6
SOFTWARE
ASN A:255 , HOH A:2041 , LYS E:133
BINDING SITE FOR MONO-SACCHARIDE NAG A1629 BOUND TO ASN A 255
18
CC7
SOFTWARE
THR A:315 , SER A:316 , LYS A:322 , ASN A:324 , ASN A:327
BINDING SITE FOR MONO-SACCHARIDE NAG A1630 BOUND TO ASN A 327
19
CC8
SOFTWARE
ASN A:396 , CYS A:397 , SER A:398 , ARG A:399 , HOH A:2416 , HOH A:2417 , GLU B:478 , ASP B:488 , LEU B:490 , ARG B:552
BINDING SITE FOR MONO-SACCHARIDE NAG A1631 BOUND TO ASN A 396
20
CC9
SOFTWARE
ASN B:207 , SER B:209 , GLN E:75
BINDING SITE FOR MONO-SACCHARIDE NAG B1630 BOUND TO ASN B 207
21
DC3
SOFTWARE
ILE A:555 , GLU A:558 , ACT A:1627 , HOH A:2357 , HOH A:2359 , ASN B:396 , CYS B:397 , SER B:398 , ARG B:399 , SO4 B:1622 , HOH B:2107
BINDING SITE FOR MONO-SACCHARIDE NAG B1627 BOUND TO ASN B 396
22
DC5
SOFTWARE
TYR E:37 , ASN E:39 , SER E:41 , HOH E:2011 , HOH E:2035
BINDING SITE FOR MONO-SACCHARIDE NAG E1175 BOUND TO ASN E 39
23
DC6
SOFTWARE
ASN E:142 , SER E:144 , GLU E:146 , GLY E:147 , ASN E:150
BINDING SITE FOR MONO-SACCHARIDE NAG E1174 BOUND TO ASN E 142
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
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PROSITE Patterns/Profiles
(, 0)
Info
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Exons
(0, 0)
Info
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(0, 0)
Info
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CATH Domains
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Pfam Domains
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Protein & NOT Site
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Chain A
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Asymmetric Unit 1
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select all 'ALA' residues (Alanines) in chain 'A'
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select residue range 5 to 10 in all chains
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select residue range 5 to 10 in chain 'A'
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Show PDB file:
Asym.Unit (408 KB)
Header - Asym.Unit
Biol.Unit 1 (201 KB)
Header - Biol.Unit 1
Biol.Unit 2 (203 KB)
Header - Biol.Unit 2
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