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4UBW
Asym. Unit
Info
Asym.Unit (256 KB)
Biol.Unit 1 (249 KB)
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(1)
Title
:
APO STRUCTURE OF THE 3-KETOACYL-COA THIOLASE FADA5 FROM M. TUBERCULOSIS
Authors
:
C. M. Schaefer, C. Kisker
Date
:
13 Aug 14 (Deposition) - 17 Dec 14 (Release) - 14 Jan 15 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.70
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Degradative Thiolase, Apo, Mycobacterium Tuberculosis, Cholesterol Metabolism, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
C. M. Schaefer, R. Lu, N. M. Nesbitt, J. Schiebel, N. S. Sampson, C. Kisker
Fada5 A Thiolase From Mycobacterium Tuberculosis: A Steroid-Binding Pocket Reveals The Potential For Drug Development Against Tuberculosis.
Structure V. 23 21 2015
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Hetero Components
(4, 34)
Info
All Hetero Components
1a: CHLORIDE ION (CLa)
2a: DIMETHYL SULFOXIDE (DMSa)
2b: DIMETHYL SULFOXIDE (DMSb)
2c: DIMETHYL SULFOXIDE (DMSc)
2d: DIMETHYL SULFOXIDE (DMSd)
2e: DIMETHYL SULFOXIDE (DMSe)
2f: DIMETHYL SULFOXIDE (DMSf)
2g: DIMETHYL SULFOXIDE (DMSg)
2h: DIMETHYL SULFOXIDE (DMSh)
2i: DIMETHYL SULFOXIDE (DMSi)
2j: DIMETHYL SULFOXIDE (DMSj)
2k: DIMETHYL SULFOXIDE (DMSk)
2l: DIMETHYL SULFOXIDE (DMSl)
2m: DIMETHYL SULFOXIDE (DMSm)
2n: DIMETHYL SULFOXIDE (DMSn)
2o: DIMETHYL SULFOXIDE (DMSo)
2p: DIMETHYL SULFOXIDE (DMSp)
2q: DIMETHYL SULFOXIDE (DMSq)
2r: DIMETHYL SULFOXIDE (DMSr)
2s: DIMETHYL SULFOXIDE (DMSs)
2t: DIMETHYL SULFOXIDE (DMSt)
2u: DIMETHYL SULFOXIDE (DMSu)
2v: DIMETHYL SULFOXIDE (DMSv)
2w: DIMETHYL SULFOXIDE (DMSw)
2x: DIMETHYL SULFOXIDE (DMSx)
2y: DIMETHYL SULFOXIDE (DMSy)
2z: DIMETHYL SULFOXIDE (DMSz)
3a: GLYCEROL (GOLa)
3b: GLYCEROL (GOLb)
3c: GLYCEROL (GOLc)
3d: GLYCEROL (GOLd)
3e: GLYCEROL (GOLe)
3f: GLYCEROL (GOLf)
4a: SODIUM ION (NAa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CL
1
Ligand/Ion
CHLORIDE ION
2
DMS
26
Ligand/Ion
DIMETHYL SULFOXIDE
3
GOL
6
Ligand/Ion
GLYCEROL
4
NA
1
Ligand/Ion
SODIUM ION
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Sites
(30, 30)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
13: AD4 (SOFTWARE)
14: AD5 (SOFTWARE)
15: AD6 (SOFTWARE)
16: AD7 (SOFTWARE)
17: AD8 (SOFTWARE)
18: AD9 (SOFTWARE)
19: AE1 (SOFTWARE)
20: AE2 (SOFTWARE)
21: AE3 (SOFTWARE)
22: AE4 (SOFTWARE)
23: AE5 (SOFTWARE)
24: AE6 (SOFTWARE)
25: AE7 (SOFTWARE)
26: AE8 (SOFTWARE)
27: AE9 (SOFTWARE)
28: AF1 (SOFTWARE)
29: AF2 (SOFTWARE)
30: AF3 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
GLY A:64 , GLU A:65 , ARG A:125 , VAL A:126
binding site for residue GOL A 401
02
AC2
SOFTWARE
LEU A:323 , ALA A:326 , ARG A:327 , MET A:333 , DMS A:406
binding site for residue GOL A 402
03
AC3
SOFTWARE
PRO A:195 , ILE A:196
binding site for residue GOL A 403
04
AC4
SOFTWARE
ARG A:161 , THR A:269
binding site for residue GOL A 404
05
AC5
SOFTWARE
PHE A:172 , GLU A:175 , SER A:176 , ARG A:179 , VAL A:336 , ASN A:337 , DMS A:406
binding site for residue DMS A 405
06
AC6
SOFTWARE
GOL A:402 , DMS A:405
binding site for residue DMS A 406
07
AC7
SOFTWARE
TRP A:20 , ARG A:212 , VAL A:214 , PHE A:215 , ARG A:216 , ASP B:190
binding site for residue DMS A 407
08
AC8
SOFTWARE
ILE A:306 , GLY A:307 , ILE A:309 , PRO A:331 , ASP A:332
binding site for residue DMS A 408
09
AC9
SOFTWARE
ASN A:18 , SER A:22 , SER A:124 , ARG A:125
binding site for residue DMS A 409
10
AD1
SOFTWARE
ASP A:51 , VAL A:262 , HIS A:266 , GLY B:50
binding site for residue DMS A 410
11
AD2
SOFTWARE
ARG A:178 , ARG A:182
binding site for residue DMS A 411
12
AD3
SOFTWARE
ARG A:17 , ILE A:248
binding site for residue DMS A 412
13
AD4
SOFTWARE
PRO A:207 , THR A:208 , GLU B:283
binding site for residue DMS A 413
14
AD5
SOFTWARE
ARG A:221 , GLU A:222 , THR A:223 , THR A:224 , GLY A:227 , LEU A:228 , LEU A:231
binding site for residue DMS A 414
15
AD6
SOFTWARE
ALA B:185
binding site for residue DMS A 415
16
AD7
SOFTWARE
LYS A:301
binding site for residue DMS A 416
17
AD8
SOFTWARE
ASN A:18 , LEU A:201 , ARG A:212
binding site for residue DMS A 417
18
AD9
SOFTWARE
ARG A:366
binding site for residue DMS A 420
19
AE1
SOFTWARE
HOH A:510 , GLY B:46 , LEU B:47 , HIS B:266
binding site for residue DMS A 421
20
AE2
SOFTWARE
VAL B:171 , PHE B:172 , GLU B:175 , ARG B:179 , CL B:413
binding site for residue GOL B 401
21
AE3
SOFTWARE
TRP B:20 , ARG B:212
binding site for residue GOL B 402
22
AE4
SOFTWARE
TRP B:20 , ARG B:212 , LEU B:213 , VAL B:214 , PHE B:215 , ARG B:216
binding site for residue DMS B 403
23
AE5
SOFTWARE
ARG B:178 , GLN B:181 , GLU B:222 , THR B:223
binding site for residue DMS B 404
24
AE6
SOFTWARE
GLU A:82 , SER B:45 , ALA B:282
binding site for residue DMS B 405
25
AE7
SOFTWARE
ARG B:182
binding site for residue DMS B 406
26
AE8
SOFTWARE
ASP B:332 , ARG B:335
binding site for residue DMS B 407
27
AE9
SOFTWARE
ILE B:306 , ILE B:309 , ASP B:332 , ARG B:335
binding site for residue DMS B 408
28
AF1
SOFTWARE
GLN B:181
binding site for residue DMS B 411
29
AF2
SOFTWARE
GLN A:54 , GLN B:98 , HIS B:101 , GLN B:277 , LEU B:279
binding site for residue NA B 412
30
AF3
SOFTWARE
GLU B:175 , ARG B:179 , GOL B:401
binding site for residue CL B 413
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
Info
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;
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Exons
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Info
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
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CATH Domains
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (256 KB)
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