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4U8P
Asym. Unit
Info
Asym.Unit (684 KB)
Biol.Unit 1 (674 KB)
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(1)
Title
:
STRUCTURE OF ASPERGILLUS FUMIGATUS UDP-GALACTOPYRANOSE MUTASE MUTANT Y317A COMPLEXED WITH UDP
Authors
:
I. A. Qureshi, R. Chaudhary, J. J. Tanner
Date
:
03 Aug 14 (Deposition) - 03 Dec 14 (Release) - 24 Dec 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.05
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B,C,D (1x)
Keywords
:
Nucleotide Binding, Mutase, Flavin Adenine Dinucleotide Binding, Isomerase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
I. Da Fonseca, I. A. Qureshi, R. Mehra-Chaudhary, K. Kizjakina, J. J. Tanner, P. Sobrado
Contributions Of Unique Active Site Residues Of Eukaryotic Udp-Galactopyranose Mutases To Substrate Recognition And Active Site Dynamics.
Biochemistry V. 53 7794 2014
[
close entry info
]
Hetero Components
(4, 57)
Info
All Hetero Components
1a: 1,2-ETHANEDIOL (EDOa)
1aa: 1,2-ETHANEDIOL (EDOaa)
1ab: 1,2-ETHANEDIOL (EDOab)
1b: 1,2-ETHANEDIOL (EDOb)
1c: 1,2-ETHANEDIOL (EDOc)
1d: 1,2-ETHANEDIOL (EDOd)
1e: 1,2-ETHANEDIOL (EDOe)
1f: 1,2-ETHANEDIOL (EDOf)
1g: 1,2-ETHANEDIOL (EDOg)
1h: 1,2-ETHANEDIOL (EDOh)
1i: 1,2-ETHANEDIOL (EDOi)
1j: 1,2-ETHANEDIOL (EDOj)
1k: 1,2-ETHANEDIOL (EDOk)
1l: 1,2-ETHANEDIOL (EDOl)
1m: 1,2-ETHANEDIOL (EDOm)
1n: 1,2-ETHANEDIOL (EDOn)
1o: 1,2-ETHANEDIOL (EDOo)
1p: 1,2-ETHANEDIOL (EDOp)
1q: 1,2-ETHANEDIOL (EDOq)
1r: 1,2-ETHANEDIOL (EDOr)
1s: 1,2-ETHANEDIOL (EDOs)
1t: 1,2-ETHANEDIOL (EDOt)
1u: 1,2-ETHANEDIOL (EDOu)
1v: 1,2-ETHANEDIOL (EDOv)
1w: 1,2-ETHANEDIOL (EDOw)
1x: 1,2-ETHANEDIOL (EDOx)
1y: 1,2-ETHANEDIOL (EDOy)
1z: 1,2-ETHANEDIOL (EDOz)
2a: DIHYDROFLAVINE-ADENINE DINUCLEOTID... (FDAa)
2b: DIHYDROFLAVINE-ADENINE DINUCLEOTID... (FDAb)
2c: DIHYDROFLAVINE-ADENINE DINUCLEOTID... (FDAc)
2d: DIHYDROFLAVINE-ADENINE DINUCLEOTID... (FDAd)
3a: SULFATE ION (SO4a)
3b: SULFATE ION (SO4b)
3c: SULFATE ION (SO4c)
3d: SULFATE ION (SO4d)
3e: SULFATE ION (SO4e)
3f: SULFATE ION (SO4f)
3g: SULFATE ION (SO4g)
3h: SULFATE ION (SO4h)
3i: SULFATE ION (SO4i)
3j: SULFATE ION (SO4j)
3k: SULFATE ION (SO4k)
3l: SULFATE ION (SO4l)
3m: SULFATE ION (SO4m)
3n: SULFATE ION (SO4n)
3o: SULFATE ION (SO4o)
3p: SULFATE ION (SO4p)
3q: SULFATE ION (SO4q)
3r: SULFATE ION (SO4r)
4a: URIDINE-5'-DIPHOSPHATE (UDPa)
4b: URIDINE-5'-DIPHOSPHATE (UDPb)
4c: URIDINE-5'-DIPHOSPHATE (UDPc)
4d: URIDINE-5'-DIPHOSPHATE (UDPd)
4e: URIDINE-5'-DIPHOSPHATE (UDPe)
4f: URIDINE-5'-DIPHOSPHATE (UDPf)
4g: URIDINE-5'-DIPHOSPHATE (UDPg)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
EDO
28
Ligand/Ion
1,2-ETHANEDIOL
2
FDA
4
Ligand/Ion
DIHYDROFLAVINE-ADENINE DINUCLEOTIDE
3
SO4
18
Ligand/Ion
SULFATE ION
4
UDP
7
Ligand/Ion
URIDINE-5'-DIPHOSPHATE
[
close Hetero Component info
]
Sites
(57, 57)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
13: AD4 (SOFTWARE)
14: AD5 (SOFTWARE)
15: AD6 (SOFTWARE)
16: AD7 (SOFTWARE)
17: AD8 (SOFTWARE)
18: AD9 (SOFTWARE)
19: AE1 (SOFTWARE)
20: AE2 (SOFTWARE)
21: AE3 (SOFTWARE)
22: AE4 (SOFTWARE)
23: AE5 (SOFTWARE)
24: AE6 (SOFTWARE)
25: AE7 (SOFTWARE)
26: AE8 (SOFTWARE)
27: AE9 (SOFTWARE)
28: AF1 (SOFTWARE)
29: AF2 (SOFTWARE)
30: AF3 (SOFTWARE)
31: AF4 (SOFTWARE)
32: AF5 (SOFTWARE)
33: AF6 (SOFTWARE)
34: AF7 (SOFTWARE)
35: AF8 (SOFTWARE)
36: AF9 (SOFTWARE)
37: AG1 (SOFTWARE)
38: AG2 (SOFTWARE)
39: AG3 (SOFTWARE)
40: AG4 (SOFTWARE)
41: AG5 (SOFTWARE)
42: AG6 (SOFTWARE)
43: AG7 (SOFTWARE)
44: AG8 (SOFTWARE)
45: AG9 (SOFTWARE)
46: AH1 (SOFTWARE)
47: AH2 (SOFTWARE)
48: AH3 (SOFTWARE)
49: AH4 (SOFTWARE)
50: AH5 (SOFTWARE)
51: AH6 (SOFTWARE)
52: AH7 (SOFTWARE)
53: AH8 (SOFTWARE)
54: AH9 (SOFTWARE)
55: AI1 (SOFTWARE)
56: AI2 (SOFTWARE)
57: AI3 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
GLY A:14 , GLY A:16 , PRO A:17 , THR A:18 , ASP A:38 , SER A:39 , GLY A:45 , LEU A:46 , ALA A:47 , VAL A:60 , GLY A:62 , HIS A:63 , VAL A:64 , GLY A:240 , VAL A:242 , GLU A:373 , GLY A:418 , GLY A:446 , ARG A:447 , GLY A:456 , ASN A:457 , GLN A:458 , SER A:461 , EDO A:613 , HOH A:723 , HOH A:737 , HOH A:752 , HOH A:768 , HOH A:789 , HOH A:946 , HOH A:957
binding site for residue FDA A 601
02
AC2
SOFTWARE
TYR A:104 , MET A:159 , TYR A:162 , ASN A:163 , TRP A:167 , TYR A:453 , EDO A:610
binding site for residue UDP A 602
03
AC3
SOFTWARE
LYS A:288 , LEU A:290 , PHE A:291 , TYR A:292 , SER A:377 , SER A:378 , HOH A:859 , HOH A:861
binding site for residue UDP A 603
04
AC4
SOFTWARE
PRO A:307 , GLU A:308 , ARG A:309 , LYS A:402 , HOH A:908
binding site for residue SO4 A 604
05
AC5
SOFTWARE
LYS A:82 , GLU A:83
binding site for residue SO4 A 605
06
AC6
SOFTWARE
LYS A:70 , ARG A:496
binding site for residue SO4 A 606
07
AC7
SOFTWARE
VAL A:382 , ASN A:383 , GLN A:384 , GLU A:385 , HOH A:707 , LYS D:199 , THR D:200
binding site for residue SO4 A 607
08
AC8
SOFTWARE
LEU A:351 , GLN A:358 , SER A:359 , GLU A:406 , HOH A:917
binding site for residue SO4 A 608
09
AC9
SOFTWARE
TRP A:443 , ASN A:471 , GLU C:494 , HOH C:819
binding site for residue EDO A 609
10
AD1
SOFTWARE
TYR A:162 , VAL A:166 , ARG A:327 , TYR A:419 , TYR A:453 , UDP A:602
binding site for residue EDO A 610
11
AD2
SOFTWARE
ARG A:303 , ASP A:405 , GLU A:406
binding site for residue EDO A 611
12
AD3
SOFTWARE
PHE A:66 , SER A:67 , THR A:209 , HOH A:757 , HOH A:851
binding site for residue EDO A 612
13
AD4
SOFTWARE
GLY A:62 , VAL A:64 , TRP A:315 , ARG A:327 , FDA A:601 , HOH A:956
binding site for residue EDO A 613
14
AD5
SOFTWARE
ASP A:485 , ASN A:488
binding site for residue EDO A 614
15
AD6
SOFTWARE
GLY B:14 , GLY B:16 , PRO B:17 , THR B:18 , ASP B:38 , SER B:39 , GLY B:45 , LEU B:46 , ALA B:47 , VAL B:60 , GLY B:62 , HIS B:63 , VAL B:64 , GLY B:240 , VAL B:242 , MET B:269 , GLU B:373 , GLY B:418 , TYR B:419 , GLY B:446 , ARG B:447 , GLY B:456 , ASN B:457 , GLN B:458 , SER B:461 , EDO B:615 , HOH B:752 , HOH B:764 , HOH B:771 , HOH B:781 , HOH B:867 , HOH B:908 , HOH B:942
binding site for residue FDA B 601
16
AD7
SOFTWARE
TYR B:104 , MET B:159 , TYR B:162 , ASN B:163 , TRP B:167 , TRP B:178 , TYR B:453 , EDO B:612
binding site for residue UDP B 602
17
AD8
SOFTWARE
LYS B:288 , LEU B:290 , PHE B:291 , TYR B:292 , SER B:377 , SER B:378
binding site for residue UDP B 603
18
AD9
SOFTWARE
PRO B:307 , GLU B:308 , ARG B:309 , LYS B:402 , HOH B:815
binding site for residue SO4 B 604
19
AE1
SOFTWARE
ASN B:40 , ARG B:413
binding site for residue SO4 B 605
20
AE2
SOFTWARE
ARG B:496
binding site for residue SO4 B 606
21
AE3
SOFTWARE
LYS B:82 , GLU B:83
binding site for residue SO4 B 607
22
AE4
SOFTWARE
PRO B:114 , LYS B:115 , ASN B:383 , THR B:386 , HOH B:701 , HOH B:703
binding site for residue SO4 B 608
23
AE5
SOFTWARE
PRO B:114 , GLU B:116 , PRO B:324 , ASP B:390 , EDO B:610 , EDO B:613 , HOH B:712
binding site for residue EDO B 609
24
AE6
SOFTWARE
ASN B:322 , CYS B:323 , ASP B:390 , EDO B:609 , HOH B:707
binding site for residue EDO B 610
25
AE7
SOFTWARE
ASN B:471 , HOH B:1012 , GLU D:494 , HOH D:935
binding site for residue EDO B 611
26
AE8
SOFTWARE
TYR B:162 , VAL B:166 , ARG B:327 , TYR B:419 , TYR B:453 , UDP B:602
binding site for residue EDO B 612
27
AE9
SOFTWARE
GLU B:116 , GLU B:117 , ASP B:321 , CYS B:323 , PRO B:324 , EDO B:609 , HOH B:731
binding site for residue EDO B 613
28
AF1
SOFTWARE
PHE B:66 , SER B:67 , THR B:209 , HOH B:763 , HOH B:936
binding site for residue EDO B 614
29
AF2
SOFTWARE
GLY B:62 , TRP B:315 , ARG B:327 , FDA B:601 , HOH B:866
binding site for residue EDO B 615
30
AF3
SOFTWARE
LEU B:179 , GLY B:180 , PRO B:484 , ASP B:485 , ASN B:488 , HOH B:877
binding site for residue EDO B 616
31
AF4
SOFTWARE
GLY C:14 , GLY C:16 , PRO C:17 , THR C:18 , ASP C:38 , SER C:39 , GLY C:45 , LEU C:46 , ALA C:47 , VAL C:60 , GLY C:62 , HIS C:63 , VAL C:64 , GLY C:240 , VAL C:242 , MET C:269 , THR C:295 , GLU C:373 , GLY C:418 , TYR C:419 , GLY C:446 , ARG C:447 , GLY C:456 , ASN C:457 , GLN C:458 , SER C:461 , EDO C:610 , EDO C:613 , HOH C:734 , HOH C:807 , HOH C:812 , HOH C:850 , HOH C:859 , HOH C:878 , HOH C:894
binding site for residue FDA C 601
32
AF5
SOFTWARE
ARG C:91 , TYR C:104 , MET C:159 , TYR C:162 , ASN C:163 , TRP C:167 , TRP C:178 , TYR C:453 , EDO C:609 , EDO C:610
binding site for residue UDP C 602
33
AF6
SOFTWARE
LYS C:288 , LEU C:290 , PHE C:291 , TYR C:292 , SER C:377 , SER C:378
binding site for residue UDP C 603
34
AF7
SOFTWARE
PRO C:307 , GLU C:308 , ARG C:309 , LYS C:402 , HOH C:911 , HOH C:947
binding site for residue SO4 C 604
35
AF8
SOFTWARE
THR C:152 , ARG C:160
binding site for residue SO4 C 605
36
AF9
SOFTWARE
PRO C:114 , LYS C:115
binding site for residue SO4 C 606
37
AG1
SOFTWARE
ASN B:248 , LYS C:70 , ARG C:496
binding site for residue SO4 C 607
38
AG2
SOFTWARE
GLU A:494 , ASN C:471 , HOH C:817 , HOH C:980
binding site for residue EDO C 608
39
AG3
SOFTWARE
TYR C:162 , VAL C:166 , ARG C:327 , TYR C:419 , TYR C:453 , UDP C:602
binding site for residue EDO C 609
40
AG4
SOFTWARE
VAL C:64 , ARG C:91 , FDA C:601 , UDP C:602 , EDO C:613
binding site for residue EDO C 610
41
AG5
SOFTWARE
ARG C:303 , GLY C:304 , ASP C:405 , GLU C:406
binding site for residue EDO C 611
42
AG6
SOFTWARE
PHE C:66 , SER C:67 , THR C:209 , HOH C:763 , HOH C:818
binding site for residue EDO C 612
43
AG7
SOFTWARE
GLY C:62 , TRP C:315 , ARG C:327 , FDA C:601 , EDO C:610 , HOH C:737
binding site for residue EDO C 613
44
AG8
SOFTWARE
MET C:149 , ALA C:185 , ASN C:187 , HOH C:757
binding site for residue EDO C 614
45
AG9
SOFTWARE
GLY C:202 , TRP C:204
binding site for residue EDO C 615
46
AH1
SOFTWARE
TRP C:178 , LEU C:179 , GLY C:180 , PRO C:484 , ASP C:485 , ASN C:488 , HOH C:822
binding site for residue EDO C 616
47
AH2
SOFTWARE
GLY D:14 , GLY D:16 , PRO D:17 , THR D:18 , ASP D:38 , SER D:39 , GLY D:45 , LEU D:46 , ALA D:47 , VAL D:60 , GLY D:62 , HIS D:63 , VAL D:64 , GLY D:240 , VAL D:242 , MET D:269 , GLU D:373 , GLY D:418 , TYR D:419 , GLY D:446 , ARG D:447 , GLY D:456 , ASN D:457 , GLN D:458 , SER D:461 , EDO D:609 , HOH D:728 , HOH D:753 , HOH D:798 , HOH D:814 , HOH D:872 , HOH D:891
binding site for residue FDA D 601
48
AH3
SOFTWARE
TYR D:104 , MET D:159 , TYR D:162 , ASN D:163 , TRP D:167 , TRP D:178 , TYR D:453 , EDO D:608
binding site for residue UDP D 602
49
AH4
SOFTWARE
PRO D:307 , GLU D:308 , ARG D:309 , LYS D:402 , HOH D:904
binding site for residue SO4 D 603
50
AH5
SOFTWARE
LYS D:115 , HOH D:980
binding site for residue SO4 D 604
51
AH6
SOFTWARE
THR D:152 , ARG D:160 , HOH D:845
binding site for residue SO4 D 605
52
AH7
SOFTWARE
ASN A:279 , ASP A:280 , GLN A:281 , GLU A:282 , LYS D:70
binding site for residue SO4 D 606
53
AH8
SOFTWARE
GLU B:494 , HOH B:874 , TRP D:443 , ASN D:471 , HOH D:880
binding site for residue EDO D 607
54
AH9
SOFTWARE
TYR D:162 , VAL D:166 , ARG D:327 , TYR D:419 , TYR D:453 , UDP D:602
binding site for residue EDO D 608
55
AI1
SOFTWARE
GLY D:62 , VAL D:64 , TRP D:315 , ARG D:327 , FDA D:601 , HOH D:854
binding site for residue EDO D 609
56
AI2
SOFTWARE
MET D:149 , ALA D:185 , ASN D:187 , HOH D:764
binding site for residue EDO D 610
57
AI3
SOFTWARE
TRP D:178 , LEU D:179 , GLY D:180 , PRO D:484 , ASP D:485 , ASN D:488 , HOH D:825
binding site for residue EDO D 611
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SAPs(SNPs)/Variants
(0, 0)
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Exons
(0, 0)
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