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4U8J
Asym. Unit
Info
Asym.Unit (672 KB)
Biol.Unit 1 (663 KB)
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(1)
Title
:
STRUCTURE OF ASPERGILLUS FUMIGATUS UDP-GALACTOPYRANOSE MUTASE MUTANT Y104A
Authors
:
I. A. Qureshi, R. Chaudhary, J. J. Tanner
Date
:
03 Aug 14 (Deposition) - 03 Dec 14 (Release) - 24 Dec 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.30
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B,C,D (1x)
Keywords
:
Nucleotide Binding, Mutase, Flavin Adenine Dinucleotide Binding, Isomerase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
I. Da Fonseca, I. A. Qureshi, R. Mehra-Chaudhary, K. Kizjakina, J. J. Tanner, P. Sobrado
Contributions Of Unique Active Site Residues Of Eukaryotic Udp-Galactopyranose Mutases To Substrate Recognition And Active Site Dynamics.
Biochemistry V. 53 7794 2014
[
close entry info
]
Hetero Components
(3, 40)
Info
All Hetero Components
1a: 1,2-ETHANEDIOL (EDOa)
1b: 1,2-ETHANEDIOL (EDOb)
1c: 1,2-ETHANEDIOL (EDOc)
1d: 1,2-ETHANEDIOL (EDOd)
1e: 1,2-ETHANEDIOL (EDOe)
1f: 1,2-ETHANEDIOL (EDOf)
1g: 1,2-ETHANEDIOL (EDOg)
1h: 1,2-ETHANEDIOL (EDOh)
1i: 1,2-ETHANEDIOL (EDOi)
1j: 1,2-ETHANEDIOL (EDOj)
1k: 1,2-ETHANEDIOL (EDOk)
1l: 1,2-ETHANEDIOL (EDOl)
1m: 1,2-ETHANEDIOL (EDOm)
2a: DIHYDROFLAVINE-ADENINE DINUCLEOTID... (FDAa)
2b: DIHYDROFLAVINE-ADENINE DINUCLEOTID... (FDAb)
2c: DIHYDROFLAVINE-ADENINE DINUCLEOTID... (FDAc)
2d: DIHYDROFLAVINE-ADENINE DINUCLEOTID... (FDAd)
3a: SULFATE ION (SO4a)
3b: SULFATE ION (SO4b)
3c: SULFATE ION (SO4c)
3d: SULFATE ION (SO4d)
3e: SULFATE ION (SO4e)
3f: SULFATE ION (SO4f)
3g: SULFATE ION (SO4g)
3h: SULFATE ION (SO4h)
3i: SULFATE ION (SO4i)
3j: SULFATE ION (SO4j)
3k: SULFATE ION (SO4k)
3l: SULFATE ION (SO4l)
3m: SULFATE ION (SO4m)
3n: SULFATE ION (SO4n)
3o: SULFATE ION (SO4o)
3p: SULFATE ION (SO4p)
3q: SULFATE ION (SO4q)
3r: SULFATE ION (SO4r)
3s: SULFATE ION (SO4s)
3t: SULFATE ION (SO4t)
3u: SULFATE ION (SO4u)
3v: SULFATE ION (SO4v)
3w: SULFATE ION (SO4w)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
EDO
13
Ligand/Ion
1,2-ETHANEDIOL
2
FDA
4
Ligand/Ion
DIHYDROFLAVINE-ADENINE DINUCLEOTIDE
3
SO4
23
Ligand/Ion
SULFATE ION
[
close Hetero Component info
]
Sites
(40, 40)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
13: AD4 (SOFTWARE)
14: AD5 (SOFTWARE)
15: AD6 (SOFTWARE)
16: AD7 (SOFTWARE)
17: AD8 (SOFTWARE)
18: AD9 (SOFTWARE)
19: AE1 (SOFTWARE)
20: AE2 (SOFTWARE)
21: AE3 (SOFTWARE)
22: AE4 (SOFTWARE)
23: AE5 (SOFTWARE)
24: AE6 (SOFTWARE)
25: AE7 (SOFTWARE)
26: AE8 (SOFTWARE)
27: AE9 (SOFTWARE)
28: AF1 (SOFTWARE)
29: AF2 (SOFTWARE)
30: AF3 (SOFTWARE)
31: AF4 (SOFTWARE)
32: AF5 (SOFTWARE)
33: AF6 (SOFTWARE)
34: AF7 (SOFTWARE)
35: AF8 (SOFTWARE)
36: AF9 (SOFTWARE)
37: AG1 (SOFTWARE)
38: AG2 (SOFTWARE)
39: AG3 (SOFTWARE)
40: AG4 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
GLY A:14 , GLY A:16 , PRO A:17 , THR A:18 , ASP A:38 , SER A:39 , GLY A:45 , LEU A:46 , ALA A:47 , VAL A:60 , GLY A:62 , HIS A:63 , VAL A:64 , GLY A:240 , VAL A:242 , MET A:269 , GLU A:373 , GLY A:418 , TYR A:419 , GLY A:446 , ARG A:447 , GLY A:456 , ASN A:457 , GLN A:458 , SER A:461 , HOH A:737 , HOH A:757 , HOH A:762 , HOH A:768 , HOH A:770 , HOH A:775 , HOH A:836
binding site for residue FDA A 601
02
AC2
SOFTWARE
PRO A:307 , GLU A:308 , ARG A:309 , LYS A:402 , HOH A:777
binding site for residue SO4 A 602
03
AC3
SOFTWARE
ASN A:40 , ARG A:413
binding site for residue SO4 A 603
04
AC4
SOFTWARE
LYS A:82 , GLU A:83
binding site for residue SO4 A 604
05
AC5
SOFTWARE
LYS A:70 , ARG A:496
binding site for residue SO4 A 605
06
AC6
SOFTWARE
TYR A:87 , THR A:88 , HOH A:811
binding site for residue SO4 A 606
07
AC7
SOFTWARE
THR A:152 , ARG A:160
binding site for residue SO4 A 607
08
AC8
SOFTWARE
ASN A:471 , HOH A:833 , HOH A:902 , GLU C:494
binding site for residue EDO A 608
09
AC9
SOFTWARE
ALA A:104 , PRO A:105 , PHE A:106 , PHE A:158 , HOH A:807
binding site for residue EDO A 609
10
AD1
SOFTWARE
ARG A:303 , ASP A:405 , GLU A:406
binding site for residue EDO A 610
11
AD2
SOFTWARE
GLY B:14 , GLY B:16 , PRO B:17 , THR B:18 , ASP B:38 , SER B:39 , GLY B:45 , LEU B:46 , ALA B:47 , VAL B:60 , GLY B:62 , HIS B:63 , VAL B:64 , GLY B:240 , VAL B:242 , MET B:269 , GLU B:373 , GLY B:418 , GLY B:446 , ARG B:447 , GLY B:456 , ASN B:457 , GLN B:458 , SER B:461 , EDO B:611 , HOH B:765 , HOH B:768 , HOH B:792 , HOH B:798 , HOH B:870
binding site for residue FDA B 601
12
AD3
SOFTWARE
PRO B:307 , GLU B:308 , ARG B:309 , LYS B:402
binding site for residue SO4 B 602
13
AD4
SOFTWARE
PRO B:114 , LYS B:115 , ASN B:383 , THR B:386 , HOH B:701 , HOH B:702
binding site for residue SO4 B 603
14
AD5
SOFTWARE
ASN B:40 , ARG B:413
binding site for residue SO4 B 604
15
AD6
SOFTWARE
TRP B:86 , TYR B:87 , THR B:88
binding site for residue SO4 B 605
16
AD7
SOFTWARE
ARG B:496
binding site for residue SO4 B 606
17
AD8
SOFTWARE
THR B:152 , ARG B:160 , HOH B:855
binding site for residue SO4 B 607
18
AD9
SOFTWARE
GLU B:116 , PRO B:324 , ASP B:390 , EDO B:609 , EDO B:613 , HOH B:707
binding site for residue EDO B 608
19
AE1
SOFTWARE
ASN B:322 , CYS B:323 , PRO B:324 , ASP B:390 , EDO B:608 , HOH B:706
binding site for residue EDO B 609
20
AE2
SOFTWARE
ASN B:471 , GLU D:494 , HOH D:797
binding site for residue EDO B 610
21
AE3
SOFTWARE
GLY B:62 , TRP B:315 , ARG B:327 , FDA B:601 , HOH B:745
binding site for residue EDO B 611
22
AE4
SOFTWARE
MET B:159 , ASN B:163
binding site for residue EDO B 612
23
AE5
SOFTWARE
GLN B:98 , GLU B:116 , GLU B:117 , ASP B:321 , CYS B:323 , PRO B:324 , EDO B:608 , HOH B:729
binding site for residue EDO B 613
24
AE6
SOFTWARE
GLY C:14 , GLY C:16 , PRO C:17 , THR C:18 , ASP C:38 , SER C:39 , GLY C:45 , LEU C:46 , ALA C:47 , VAL C:60 , GLY C:62 , HIS C:63 , VAL C:64 , GLY C:240 , VAL C:242 , ARG C:327 , GLU C:373 , TYR C:419 , GLY C:446 , ARG C:447 , GLY C:456 , ASN C:457 , GLN C:458 , SER C:461 , HOH C:752 , HOH C:757 , HOH C:801 , HOH C:805 , HOH C:864 , HOH C:884
binding site for residue FDA C 601
25
AE7
SOFTWARE
PRO C:307 , GLU C:308 , ARG C:309 , LYS C:402 , HOH C:764 , HOH C:898
binding site for residue SO4 C 602
26
AE8
SOFTWARE
THR C:152 , ARG C:160
binding site for residue SO4 C 603
27
AE9
SOFTWARE
PRO C:114 , LYS C:115
binding site for residue SO4 C 604
28
AF1
SOFTWARE
LYS C:70 , ARG C:496
binding site for residue SO4 C 605
29
AF2
SOFTWARE
ASN C:40 , ASP C:50 , ARG C:413 , HOH C:841
binding site for residue SO4 C 606
30
AF3
SOFTWARE
TYR C:87 , THR C:88
binding site for residue SO4 C 607
31
AF4
SOFTWARE
GLU A:494 , TRP C:443 , ASN C:471 , HOH C:791
binding site for residue EDO C 608
32
AF5
SOFTWARE
VAL C:64 , PHE C:66 , ARG C:91 , ASN C:457
binding site for residue EDO C 609
33
AF6
SOFTWARE
GLY D:14 , GLY D:16 , PRO D:17 , THR D:18 , ASP D:38 , SER D:39 , GLY D:45 , LEU D:46 , ALA D:47 , VAL D:60 , GLY D:62 , HIS D:63 , VAL D:64 , GLY D:240 , VAL D:242 , MET D:269 , GLU D:373 , GLY D:418 , GLY D:446 , ARG D:447 , GLY D:456 , ASN D:457 , GLN D:458 , SER D:461 , HOH D:756 , HOH D:757 , HOH D:804 , HOH D:817 , HOH D:851
binding site for residue FDA D 601
34
AF7
SOFTWARE
VAL A:382 , ASN A:383 , GLN A:384 , GLU A:385 , LYS D:199 , THR D:200 , HOH D:712
binding site for residue SO4 D 602
35
AF8
SOFTWARE
PRO D:307 , GLU D:308 , ARG D:309 , LYS D:402 , HOH D:845
binding site for residue SO4 D 603
36
AF9
SOFTWARE
PRO D:114 , LYS D:115
binding site for residue SO4 D 604
37
AG1
SOFTWARE
THR D:152 , ARG D:160 , HOH D:836
binding site for residue SO4 D 605
38
AG2
SOFTWARE
ASN D:40 , ASP D:50 , ARG D:413
binding site for residue SO4 D 606
39
AG3
SOFTWARE
GLU B:494 , ASN D:471 , HOH D:848
binding site for residue EDO D 607
40
AG4
SOFTWARE
TRP D:178 , PRO D:484 , ASP D:485 , ASN D:488 , HOH D:825
binding site for residue EDO D 608
[
close Site info
]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
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Sorry, no Info available
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PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
;
View:
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Label:
End label:
Sorry, no Info available
[
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]
Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(0, 0)
Info
All SCOP Domains
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Label:
Sorry, no Info available
[
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CATH Domains
(0, 0)
Info
all CATH domains
View:
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Label:
Sorry, no Info available
[
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Pfam Domains
(0, 0)
Info
all PFAM domains
View:
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Label:
Sorry, no Info available
[
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