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4U67
Asym. Unit
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Asym.Unit (3.4 MB)
Biol.Unit 1, α-C (3.4 MB)
Biol.Unit 1 (3.4 MB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE LARGE RIBOSOMAL SUBUNIT (50S) OF DEINOCOCCUS RADIODURANS CONTAINING A THREE RESIDUE INSERTION IN L22
Authors
:
I. Wekselman, E. Zimmerman, H. Rozenberg, A. Bashan, A. Yonath
Date
:
28 Jul 14 (Deposition) - 05 Aug 15 (Release) - 05 Aug 15 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.65
Chains
:
Asym. Unit : A,B,C,D,E,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,1,2,3
Biol. Unit 1: A,B,C,D,E,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,1,2,3 (1x)
Keywords
:
Ribosome, Antibiotics, Resistance, Erythromycin
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
I. Wekselman, E. Zimmerman, H. Rozenberg, A. Bashan, L. Lindahl, J. M. Zengel, A. Yonath
A Mutation In The Ribosomal Protein L22 Modulates The Structure Of The Nascent Protein Exit Tunnel
To Be Published
[
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Hetero Components
(1, 51)
Info
All Hetero Components
1a: MAGNESIUM ION (MGa)
1aa: MAGNESIUM ION (MGaa)
1ab: MAGNESIUM ION (MGab)
1ac: MAGNESIUM ION (MGac)
1ad: MAGNESIUM ION (MGad)
1ae: MAGNESIUM ION (MGae)
1af: MAGNESIUM ION (MGaf)
1ag: MAGNESIUM ION (MGag)
1ah: MAGNESIUM ION (MGah)
1ai: MAGNESIUM ION (MGai)
1aj: MAGNESIUM ION (MGaj)
1ak: MAGNESIUM ION (MGak)
1al: MAGNESIUM ION (MGal)
1am: MAGNESIUM ION (MGam)
1an: MAGNESIUM ION (MGan)
1ao: MAGNESIUM ION (MGao)
1ap: MAGNESIUM ION (MGap)
1aq: MAGNESIUM ION (MGaq)
1ar: MAGNESIUM ION (MGar)
1as: MAGNESIUM ION (MGas)
1at: MAGNESIUM ION (MGat)
1au: MAGNESIUM ION (MGau)
1av: MAGNESIUM ION (MGav)
1aw: MAGNESIUM ION (MGaw)
1ax: MAGNESIUM ION (MGax)
1ay: MAGNESIUM ION (MGay)
1b: MAGNESIUM ION (MGb)
1c: MAGNESIUM ION (MGc)
1d: MAGNESIUM ION (MGd)
1e: MAGNESIUM ION (MGe)
1f: MAGNESIUM ION (MGf)
1g: MAGNESIUM ION (MGg)
1h: MAGNESIUM ION (MGh)
1i: MAGNESIUM ION (MGi)
1j: MAGNESIUM ION (MGj)
1k: MAGNESIUM ION (MGk)
1l: MAGNESIUM ION (MGl)
1m: MAGNESIUM ION (MGm)
1n: MAGNESIUM ION (MGn)
1o: MAGNESIUM ION (MGo)
1p: MAGNESIUM ION (MGp)
1q: MAGNESIUM ION (MGq)
1r: MAGNESIUM ION (MGr)
1s: MAGNESIUM ION (MGs)
1t: MAGNESIUM ION (MGt)
1u: MAGNESIUM ION (MGu)
1v: MAGNESIUM ION (MGv)
1w: MAGNESIUM ION (MGw)
1x: MAGNESIUM ION (MGx)
1y: MAGNESIUM ION (MGy)
1z: MAGNESIUM ION (MGz)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
MG
51
Ligand/Ion
MAGNESIUM ION
[
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Sites
(47, 47)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
13: AD4 (SOFTWARE)
14: AD5 (SOFTWARE)
15: AD6 (SOFTWARE)
16: AD7 (SOFTWARE)
17: AD8 (SOFTWARE)
18: AD9 (SOFTWARE)
19: AE1 (SOFTWARE)
20: AE2 (SOFTWARE)
21: AE3 (SOFTWARE)
22: AE4 (SOFTWARE)
23: AE5 (SOFTWARE)
24: AE6 (SOFTWARE)
25: AE7 (SOFTWARE)
26: AE8 (SOFTWARE)
27: AE9 (SOFTWARE)
28: AF1 (SOFTWARE)
29: AF2 (SOFTWARE)
30: AF3 (SOFTWARE)
31: AF4 (SOFTWARE)
32: AF5 (SOFTWARE)
33: AF6 (SOFTWARE)
34: AF7 (SOFTWARE)
35: AF8 (SOFTWARE)
36: AF9 (SOFTWARE)
37: AG1 (SOFTWARE)
38: AG2 (SOFTWARE)
39: AG3 (SOFTWARE)
40: AG4 (SOFTWARE)
41: AG5 (SOFTWARE)
42: AG6 (SOFTWARE)
43: AG7 (SOFTWARE)
44: AG8 (SOFTWARE)
45: AG9 (SOFTWARE)
46: AH1 (SOFTWARE)
47: AH2 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
GLY K:4
binding site for residue MG K 201
02
AC2
SOFTWARE
U X:800 , A X:802 , C X:803
binding site for residue MG X 2901
03
AC3
SOFTWARE
G X:2039 , A X:2040 , A X:2041
binding site for residue MG X 2902
04
AC4
SOFTWARE
A X:2684
binding site for residue MG X 2903
05
AC5
SOFTWARE
A X:1681 , A X:1682
binding site for residue MG X 2904
06
AC6
SOFTWARE
G X:2661 , A X:2701
binding site for residue MG X 2905
07
AC7
SOFTWARE
C X:1340
binding site for residue MG X 2908
08
AC8
SOFTWARE
U X:575 , A X:576 , U X:823
binding site for residue MG X 2909
09
AC9
SOFTWARE
C X:1765 , A X:1777
binding site for residue MG X 2910
10
AD1
SOFTWARE
A X:2566 , G X:2567
binding site for residue MG X 2911
11
AD2
SOFTWARE
U X:1280 , A X:1281 , C X:1989 , A X:2031
binding site for residue MG X 2912
12
AD3
SOFTWARE
A X:1980
binding site for residue MG X 2913
13
AD4
SOFTWARE
C X:1310 , A X:2690 , A X:2692
binding site for residue MG X 2914
14
AD5
SOFTWARE
A X:1278 , U X:2594
binding site for residue MG X 2915
15
AD6
SOFTWARE
A X:984
binding site for residue MG X 2917
16
AD7
SOFTWARE
C X:2008
binding site for residue MG X 2918
17
AD8
SOFTWARE
C X:169 , U X:2222
binding site for residue MG X 2919
18
AD9
SOFTWARE
G X:2044 , G X:2481
binding site for residue MG X 2920
19
AE1
SOFTWARE
A X:815
binding site for residue MG X 2921
20
AE2
SOFTWARE
A X:764 , A X:1630
binding site for residue MG X 2922
21
AE3
SOFTWARE
A X:1771 , C X:1773 , A X:1774
binding site for residue MG X 2923
22
AE4
SOFTWARE
C X:226
binding site for residue MG X 2924
23
AE5
SOFTWARE
C X:1687 , U X:1688
binding site for residue MG X 2925
24
AE6
SOFTWARE
G X:754 , A X:1776
binding site for residue MG X 2926
25
AE7
SOFTWARE
G X:676 , G X:951 , G X:1205 , G X:1206
binding site for residue MG X 2927
26
AE8
SOFTWARE
U X:585 , A X:2482
binding site for residue MG X 2928
27
AE9
SOFTWARE
A X:743 , C X:744 , A X:774 , U X:775 , G X:776
binding site for residue MG X 2929
28
AF1
SOFTWARE
G X:2036 , G X:2555 , A X:2556
binding site for residue MG X 2930
29
AF2
SOFTWARE
A X:2690 , A X:2692 , G X:2694
binding site for residue MG X 2931
30
AF3
SOFTWARE
C X:1348
binding site for residue MG X 2932
31
AF4
SOFTWARE
C X:959 , U X:973 , U X:974
binding site for residue MG X 2933
32
AF5
SOFTWARE
A X:797 , G X:2567
binding site for residue MG X 2934
33
AF6
SOFTWARE
A X:2409 , U X:2410 , A X:2411
binding site for residue MG X 2935
34
AF7
SOFTWARE
C X:2486 , C X:2552 , G X:2553 , C X:2554
binding site for residue MG X 2936
35
AF8
SOFTWARE
A X:14 , G X:15
binding site for residue MG X 2937
36
AF9
SOFTWARE
C X:1311 , G X:1312 , U X:1656
binding site for residue MG X 2938
37
AG1
SOFTWARE
A X:1686 , C X:1687 , U X:1688 , G X:2529
binding site for residue MG X 2939
38
AG2
SOFTWARE
U X:2057 , G X:2218
binding site for residue MG X 2940
39
AG3
SOFTWARE
G X:2361
binding site for residue MG X 2941
40
AG4
SOFTWARE
ARG P:114 , U X:760 , G X:761
binding site for residue MG X 2942
41
AG5
SOFTWARE
U X:753 , A X:1774 , A X:1775
binding site for residue MG X 2943
42
AG6
SOFTWARE
G X:844
binding site for residue MG X 2944
43
AG7
SOFTWARE
G X:171 , A X:172 , A X:174 , C X:175
binding site for residue MG X 2945
44
AG8
SOFTWARE
U X:1656
binding site for residue MG X 2946
45
AG9
SOFTWARE
U X:823 , G X:1266
binding site for residue MG X 2947
46
AH1
SOFTWARE
C X:520 , U X:521 , G X:522
binding site for residue MG X 2948
47
AH2
SOFTWARE
C X:750 , U X:1637 , G X:1638
binding site for residue MG X 2949
[
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
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CATH Domains
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Pfam Domains
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