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4U4T
Asym. Unit
Info
Asym.Unit (145 KB)
Biol.Unit 1 (139 KB)
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(1)
Title
:
STRUCTURE OF A NITRATE/NITRITE ANTIPORTER NARK IN NITRATE-BOUND INWARD-OPEN STATE
Authors
:
M. Fukuda, H. Takeda, H. E. Kato, S. Doki, K. Ito, A. D. Maturana, R. Ishit O. Nureki
Date
:
24 Jul 14 (Deposition) - 15 Jul 15 (Release) - 15 Jul 15 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.40
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Transporter, Nitrate Nitrite Porter Family, Major Facilitator Superfamily, Membrane Transporter, Transport Protein
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Reference
:
M. Fukuda, H. Takeda, H. E. Kato, S. Doki, K. Ito, A. D. Maturana, R. Ishitani, O. Nureki
Structural Basis For Dynamic Mechanism Of Nitrate/Nitrite Antiport By Nark
Nat Commun V. 6 7097 2015
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Hetero Components
(4, 9)
Info
All Hetero Components
1a: NITRATE ION (NO3a)
2a: OLEIC ACID (OLAa)
2b: OLEIC ACID (OLAb)
3a: (2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTA... (OLCa)
3b: (2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTA... (OLCb)
3c: (2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTA... (OLCc)
3d: (2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTA... (OLCd)
3e: (2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTA... (OLCe)
4a: ZINC ION (ZNa)
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No.
Name
Count
Type
Full Name
1
NO3
1
Ligand/Ion
NITRATE ION
2
OLA
2
Ligand/Ion
OLEIC ACID
3
OLC
5
Ligand/Ion
(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-ENOATE
4
ZN
1
Ligand/Ion
ZINC ION
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Sites
(9, 9)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
8: AC8 (SOFTWARE)
9: AC9 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ARG A:89 , PHE A:147 , ASN A:175 , TYR A:263 , PHE A:267 , ARG A:305 , SER A:411
binding site for residue NO3 A 501
2
AC2
SOFTWARE
HIS A:255 , HIS A:460 , HOH A:615 , HOH A:620
binding site for residue ZN A 502
3
AC3
SOFTWARE
PHE A:197 , TRP A:217
binding site for residue OLA A 503
4
AC4
SOFTWARE
SER A:269 , PHE A:420 , PHE A:442 , PHE A:445 , TYR A:446
binding site for residue OLA A 504
5
AC5
SOFTWARE
VAL A:117 , TRP A:118 , PHE A:121
binding site for residue OLC A 505
6
AC6
SOFTWARE
SER A:190
binding site for residue OLC A 506
7
AC7
SOFTWARE
MET A:76
binding site for residue OLC A 507
8
AC8
SOFTWARE
MET A:76 , PHE A:419 , LYS A:423 , SER A:427
binding site for residue OLC A 508
9
AC9
SOFTWARE
TRP A:231 , LYS A:440
binding site for residue OLC A 509
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SAPs(SNPs)/Variants
(0, 0)
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Exons
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CATH Domains
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Pfam Domains
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Chain A
Asymmetric Unit 1
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