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4U4S
Asym. Unit
Info
Asym.Unit (189 KB)
Biol.Unit 1 (180 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE GLUA2 LIGAND-BINDING DOMAIN (S1S2J-L483Y-N754S) IN COMPLEX WITH GLUTAMATE AND BPAM25 AT 1.90 A RESOLUTION.
Authors
:
A. B. Noerholm, T. Deva, K. Frydenvang, J. S. Kastrup
Date
:
24 Jul 14 (Deposition) - 19 Nov 14 (Release) - 11 Feb 15 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.90
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Ampa Receptor Ligand-Binding Domain, Allosteric Modulation, Bpam25, Membrane Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
P. Francotte, A. B. Nrholm, T. Deva, L. Olsen, K. Frydenvang, E. Goffin P. Fraikin, P. De Tullio, S. Challal, J. Y. Thomas, F. Iop, C. Louis, I. Botez-Pop, P. Lestage, L. Danober, J. S. Kastrup, B. Pirotte
Positive Allosteric Modulators Of 2-Amino-3-(3-Hydroxy-5-Methylisoxazol-4-Yl)Propionic Acid Receptors Belonging To 4-Cyclopropyl-3, 4-Dihydro-2H-1, 2, 4-Pyridothiadiazine Dioxides And Diversely Chloro-Substituted 4-Cyclopropyl-3, 4-Dihydro-2H-1, 2, 4-Benzothiadiazine 1, 1-Dioxides.
J. Med. Chem. V. 57 9539 2014
(for further references see the
PDB file header
)
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Hetero Components
(7, 22)
Info
All Hetero Components
1a: 4-ETHYL-3,4-DIHYDRO-2H-PYRIDO[4,3-... (3C1a)
1b: 4-ETHYL-3,4-DIHYDRO-2H-PYRIDO[4,3-... (3C1b)
2a: ACETATE ION (ACTa)
2b: ACETATE ION (ACTb)
2c: ACETATE ION (ACTc)
2d: ACETATE ION (ACTd)
2e: ACETATE ION (ACTe)
2f: ACETATE ION (ACTf)
2g: ACETATE ION (ACTg)
2h: ACETATE ION (ACTh)
3a: CHLORIDE ION (CLa)
3b: CHLORIDE ION (CLb)
4a: GLUTAMIC ACID (GLUa)
4b: GLUTAMIC ACID (GLUb)
5a: GLYCEROL (GOLa)
5b: GLYCEROL (GOLb)
5c: GLYCEROL (GOLc)
5d: GLYCEROL (GOLd)
6a: DI(HYDROXYETHYL)ETHER (PEGa)
7a: SULFATE ION (SO4a)
7b: SULFATE ION (SO4b)
7c: SULFATE ION (SO4c)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
3C1
2
Ligand/Ion
4-ETHYL-3,4-DIHYDRO-2H-PYRIDO[4,3-E][1,2,4]THIADIAZINE1,1-DIOXIDE
2
ACT
8
Ligand/Ion
ACETATE ION
3
CL
2
Ligand/Ion
CHLORIDE ION
4
GLU
2
Mod. Amino Acid
GLUTAMIC ACID
5
GOL
4
Ligand/Ion
GLYCEROL
6
PEG
1
Ligand/Ion
DI(HYDROXYETHYL)ETHER
7
SO4
3
Ligand/Ion
SULFATE ION
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Sites
(22, 22)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
13: AD4 (SOFTWARE)
14: AD5 (SOFTWARE)
15: AD6 (SOFTWARE)
16: AD7 (SOFTWARE)
17: AD8 (SOFTWARE)
18: AD9 (SOFTWARE)
19: AE1 (SOFTWARE)
20: AE2 (SOFTWARE)
21: AE3 (SOFTWARE)
22: AE4 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
PRO A:494 , SER A:729 , LYS A:730 , GLY A:731 , LYS B:493 , PRO B:494 , PHE B:495 , MET B:496 , SER B:497 , LEU B:751 , SER B:754
binding site for residue 3C1 A 801
02
AC2
SOFTWARE
ASP A:651 , SER A:652 , LYS A:656 , ARG A:660 , HOH A:973 , HOH A:999 , HOH A:1060 , HOH A:1085
binding site for residue SO4 A 802
03
AC3
SOFTWARE
ARG A:661 , HOH A:1081 , LYS B:752
binding site for residue SO4 A 803
04
AC4
SOFTWARE
CYS A:436 , LEU A:742 , ALA A:745
binding site for residue GOL A 804
05
AC5
SOFTWARE
ARG A:660 , TRP A:671 , ARG A:675 , HOH A:1090
binding site for residue GOL A 805
06
AC6
SOFTWARE
HIS A:435 , ALA A:749 , HOH A:992 , TYR B:483
binding site for residue ACT A 806
07
AC7
SOFTWARE
MET A:496 , SER A:497 , HOH A:984 , HOH A:1002 , SER B:729 , 3C1 B:801
binding site for residue ACT A 807
08
AC8
SOFTWARE
ARG A:420 , HOH A:902 , HOH A:969 , LYS B:695
binding site for residue ACT A 808
09
AC9
SOFTWARE
GLU A:486 , ASP A:490 , PHE A:491 , LYS B:493 , ASN B:747 , HOH B:1091
binding site for residue ACT A 809
10
AD1
SOFTWARE
ALA A:665
binding site for residue CL A 810
11
AD2
SOFTWARE
TYR A:450 , PRO A:478 , LEU A:479 , THR A:480 , ARG A:485 , GLY A:653 , SER A:654 , THR A:655 , GLU A:705 , TYR A:732 , HOH A:949 , HOH A:956 , HOH A:1064
binding site for residue GLU A 811
12
AD3
SOFTWARE
LYS A:493 , PRO A:494 , PHE A:495 , MET A:496 , SER A:754 , ACT A:807 , PRO B:494 , SER B:729 , LYS B:730 , GLY B:731 , HOH B:1082
binding site for residue 3C1 B 801
13
AD4
SOFTWARE
SER B:652 , LYS B:656 , ARG B:660 , ACT B:807 , HOH B:980 , HOH B:1070 , HOH B:1088
binding site for residue SO4 B 802
14
AD5
SOFTWARE
GLY B:451 , ALA B:452 , ARG B:453 , TRP B:460 , ARG B:485 , GLU B:657 , HOH B:1006 , HOH B:1008 , HOH B:1070
binding site for residue GOL B 803
15
AD6
SOFTWARE
ARG B:660 , TRP B:671 , ARG B:675 , ACT B:807
binding site for residue GOL B 804
16
AD7
SOFTWARE
GLU B:416 , GLY B:417 , ARG B:420 , HOH B:1101
binding site for residue PEG B 805
17
AD8
SOFTWARE
HIS B:412 , ARG B:420 , HOH B:1047
binding site for residue ACT B 806
18
AD9
SOFTWARE
LYS B:656 , ARG B:660 , ARG B:675 , PHE B:682 , SO4 B:802 , GOL B:804 , HOH B:1089
binding site for residue ACT B 807
19
AE1
SOFTWARE
SER A:729 , MET B:496 , SER B:497 , HOH B:984 , HOH B:1054
binding site for residue ACT B 808
20
AE2
SOFTWARE
LYS A:493 , HOH A:1087 , GLU B:486 , ASP B:490 , PHE B:491
binding site for residue ACT B 809
21
AE3
SOFTWARE
LYS B:393 , THR B:394
binding site for residue CL B 810
22
AE4
SOFTWARE
TYR B:450 , PRO B:478 , LEU B:479 , THR B:480 , ARG B:485 , LEU B:650 , GLY B:653 , SER B:654 , THR B:655 , GLU B:705 , TYR B:732 , HOH B:955 , HOH B:970 , HOH B:979
binding site for residue GLU B 811
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SAPs(SNPs)/Variants
(0, 0)
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Asym.Unit (189 KB)
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