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4U09
Biol. Unit 1
Info
Asym.Unit (148 KB)
Biol.Unit 1 (73 KB)
Biol.Unit 2 (74 KB)
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(1)
Title
:
STRUCTURE OF LEPTOSPIRA INTERROGANS LRR PROTEIN LIC12759
Authors
:
W. Shepard, F. A. Saul, A. Haouz, M. Picardeau
Date
:
11 Jul 14 (Deposition) - 03 Jun 15 (Release) - 17 Jun 15 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.95
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Lrr Protein, Pathogen, Virulence Factor, Unknown Function
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
I. Miras, F. Saul, M. Nowakowski, P. Weber, A. Haouz, W. Shepard, M. Picardeau
Structural Characterization Of A Novel Subfamily Of Leucine-Rich Repeat Proteins From The Human Pathogen Leptospira Interrogans.
Acta Crystallogr. , Sect. D V. 71 1351 2015
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Hetero Components
(4, 5)
Info
All Hetero Components
1a: CHLORIDE ION (CLa)
1b: CHLORIDE ION (CLb)
1c: CHLORIDE ION (CLc)
1d: CHLORIDE ION (CLd)
2a: 2-(N-MORPHOLINO)-ETHANESULFONIC AC... (MESa)
2b: 2-(N-MORPHOLINO)-ETHANESULFONIC AC... (MESb)
2c: 2-(N-MORPHOLINO)-ETHANESULFONIC AC... (MESc)
3a: SELENOMETHIONINE (MSEa)
3b: SELENOMETHIONINE (MSEb)
3c: SELENOMETHIONINE (MSEc)
3d: SELENOMETHIONINE (MSEd)
4a: DI(HYDROXYETHYL)ETHER (PEGa)
5a: SULFATE ION (SO4a)
6a: ZINC ION (ZNa)
6b: ZINC ION (ZNb)
6c: ZINC ION (ZNc)
6d: ZINC ION (ZNd)
6e: ZINC ION (ZNe)
6f: ZINC ION (ZNf)
View:
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Label:
No.
Name
Count
Type
Full Name
1
CL
-1
Ligand/Ion
CHLORIDE ION
2
MES
1
Ligand/Ion
2-(N-MORPHOLINO)-ETHANESULFONIC ACID
3
MSE
2
Mod. Amino Acid
SELENOMETHIONINE
4
PEG
1
Ligand/Ion
DI(HYDROXYETHYL)ETHER
5
SO4
1
Ligand/Ion
SULFATE ION
6
ZN
-1
Ligand/Ion
ZINC ION
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Sites
(14, 14)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC9 (SOFTWARE)
09: AD1 (SOFTWARE)
10: AD2 (SOFTWARE)
11: AD3 (SOFTWARE)
12: AD4 (SOFTWARE)
13: AD5 (SOFTWARE)
14: AD6 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
GLU A:369 , GLU A:392 , HIS B:303 , CL B:508
binding site for residue ZN A 501
02
AC2
SOFTWARE
HIS A:303 , GLY B:371 , ASP B:394 , CL B:505 , CL B:507
binding site for residue ZN A 502
03
AC3
SOFTWARE
GLU A:257 , GLU B:369 , CL B:506 , HOH B:681
binding site for residue ZN A 503
04
AC4
SOFTWARE
HIS A:188 , HOH A:666 , GLU B:343 , HOH B:693 , HOH B:713
binding site for residue ZN A 504
05
AC5
SOFTWARE
LYS A:28 , TYR A:30 , LYS A:31 , ASN A:32 , HOH A:784
binding site for residue MES A 505
06
AC6
SOFTWARE
TYR A:302 , HOH A:736 , TYR B:280 , CL B:508
binding site for residue SO4 A 506
07
AC7
SOFTWARE
TYR A:302 , HIS A:323 , SER A:325 , SER A:346 , HOH A:730 , TYR B:280 , HOH B:728
binding site for residue PEG A 507
08
AC9
SOFTWARE
HOH A:662 , HOH A:694 , HOH A:730 , GLU B:257 , HOH B:727
binding site for residue ZN B 502
09
AD1
SOFTWARE
TYR A:279 , HOH A:660 , TYR B:302 , HIS B:323 , SER B:325 , SER B:346 , HOH B:710 , HOH B:728 , HOH B:732 , HOH B:739
binding site for residue MES B 503
10
AD2
SOFTWARE
LYS A:401 , LYS B:28 , TYR B:30 , LYS B:31 , ASN B:32 , LYS B:35 , HOH B:619
binding site for residue MES B 504
11
AD3
SOFTWARE
TYR A:280 , HIS A:303 , ZN A:502 , GLY B:371 , GLU B:392 , ASP B:394 , CL B:507
binding site for residue CL B 505
12
AD4
SOFTWARE
GLU A:257 , ZN A:503 , ARG B:367 , LEU B:368 , GLU B:369 , ARG B:390
binding site for residue CL B 506
13
AD5
SOFTWARE
ZN A:502 , ASN B:349 , GLY B:371 , ASN B:372 , ASP B:394 , CL B:505
binding site for residue CL B 507
14
AD6
SOFTWARE
GLU A:392 , ZN A:501 , SO4 A:506 , HIS B:303
binding site for residue CL B 508
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
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Exons
(0, 0)
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SCOP Domains
(0, 0)
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CATH Domains
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Pfam Domains
(0, 0)
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Chain A
Asymmetric Unit 1
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Asym.Unit (148 KB)
Header - Asym.Unit
Biol.Unit 1 (73 KB)
Header - Biol.Unit 1
Biol.Unit 2 (74 KB)
Header - Biol.Unit 2
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