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4TLV
Biol. Unit 4
Info
Asym.Unit (621 KB)
Biol.Unit 1 (113 KB)
Biol.Unit 2 (111 KB)
Biol.Unit 3 (111 KB)
Biol.Unit 4 (112 KB)
Biol.Unit 5 (112 KB)
Biol.Unit 6 (108 KB)
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(1)
Title
:
CARDS TOXIN, NICKED
Authors
:
A. B. Taylor, O. N. Pakhomova, P. J. Hart
Date
:
30 May 14 (Deposition) - 08 Apr 15 (Release) - 13 May 15 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.90
Chains
:
Asym. Unit : A,B,C,D,E,F
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Biol. Unit 4: D (1x)
Biol. Unit 5: E (1x)
Biol. Unit 6: F (1x)
Keywords
:
Mycoplasma Pneumoniae, Virulence, Atypical Pneumonia, Community Acquired Respiratory Distress Syndrome, Adp-Ribosyl Transferase, Toxin, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. Becker, T. R. Kannan, A. B. Taylor, O. N. Pakhomova, Y. Zhang, S. R. Somarajan, A. Galaleldeen, S. P. Holloway, J. B. Baseman, P. J. Hart
Structure Of Cards Toxin, A Unique Adp-Ribosylating And Vacuolating Cytotoxin From Mycoplasma Pneumoniae.
Proc. Natl. Acad. Sci. Usa V. 112 5165 2015
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Hetero Components
(3, 8)
Info
All Hetero Components
1a: ACETATE ION (ACTa)
1b: ACETATE ION (ACTb)
1c: ACETATE ION (ACTc)
1d: ACETATE ION (ACTd)
2a: GLYCEROL (GOLa)
2aa: GLYCEROL (GOLaa)
2b: GLYCEROL (GOLb)
2c: GLYCEROL (GOLc)
2d: GLYCEROL (GOLd)
2e: GLYCEROL (GOLe)
2f: GLYCEROL (GOLf)
2g: GLYCEROL (GOLg)
2h: GLYCEROL (GOLh)
2i: GLYCEROL (GOLi)
2j: GLYCEROL (GOLj)
2k: GLYCEROL (GOLk)
2l: GLYCEROL (GOLl)
2m: GLYCEROL (GOLm)
2n: GLYCEROL (GOLn)
2o: GLYCEROL (GOLo)
2p: GLYCEROL (GOLp)
2q: GLYCEROL (GOLq)
2r: GLYCEROL (GOLr)
2s: GLYCEROL (GOLs)
2t: GLYCEROL (GOLt)
2u: GLYCEROL (GOLu)
2v: GLYCEROL (GOLv)
2w: GLYCEROL (GOLw)
2x: GLYCEROL (GOLx)
2y: GLYCEROL (GOLy)
2z: GLYCEROL (GOLz)
3a: SULFATE ION (SO4a)
3b: SULFATE ION (SO4b)
3c: SULFATE ION (SO4c)
3d: SULFATE ION (SO4d)
3e: SULFATE ION (SO4e)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ACT
1
Ligand/Ion
ACETATE ION
2
GOL
6
Ligand/Ion
GLYCEROL
3
SO4
1
Ligand/Ion
SULFATE ION
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Sites
(9, 9)
Info
All Sites
1: AD5 (SOFTWARE)
2: AE2 (SOFTWARE)
3: AE3 (SOFTWARE)
4: AE4 (SOFTWARE)
5: AE5 (SOFTWARE)
6: AE6 (SOFTWARE)
7: AE7 (SOFTWARE)
8: AE8 (SOFTWARE)
9: AE9 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AD5
SOFTWARE
GLU C:271 , ASP C:272 , LYS C:326 , ARG C:435 , GOL C:601 , HOH C:807 , HOH D:845
binding site for residue GOL C 602
2
AE2
SOFTWARE
LYS C:251 , SER C:265 , LYS D:251 , SER D:265
binding site for residue SO4 D 601
3
AE3
SOFTWARE
TYR D:263 , LEU D:270 , ALA D:436 , SER D:438 , HOH D:845 , HOH D:981
binding site for residue GOL D 602
4
AE4
SOFTWARE
ASN D:32 , PHE D:33 , PHE D:34 , TRP D:195 , LEU D:207 , SER D:208
binding site for residue GOL D 603
5
AE5
SOFTWARE
ARG D:102 , ARG D:113 , GLN D:117 , GLU D:522
binding site for residue GOL D 604
6
AE6
SOFTWARE
LYS D:467 , LEU D:541 , ASN D:542 , LEU D:583 , VAL D:584 , ASP D:586 , HOH D:819 , HOH D:864
binding site for residue GOL D 605
7
AE7
SOFTWARE
PRO D:54 , THR D:55 , LYS D:365 , GLU D:381 , GLY D:384
binding site for residue GOL D 606
8
AE8
SOFTWARE
ARG D:547 , ASN D:552 , GLN D:554 , TYR D:571 , LYS D:573 , HOH D:833
binding site for residue GOL D 607
9
AE9
SOFTWARE
GLU D:156 , ALA D:160 , HIS D:161 , ASP D:423 , GLU D:424 , HIS D:428 , ALA D:429 , HOH D:790
binding site for residue ACT D 608
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
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PROSITE Patterns/Profiles
(, 0)
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;
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Exons
(0, 0)
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(0, 0)
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CATH Domains
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Pfam Domains
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all PFAM domains
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Sorry, no Info available
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Atom Selection
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Protein
Nucleic
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All Atoms
Protein & NOT Variant
Protein & NOT Site
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Chain D
Asymmetric Unit 1
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Show PDB file:
Asym.Unit (621 KB)
Header - Asym.Unit
Biol.Unit 1 (113 KB)
Header - Biol.Unit 1
Biol.Unit 2 (111 KB)
Header - Biol.Unit 2
Biol.Unit 3 (111 KB)
Header - Biol.Unit 3
Biol.Unit 4 (112 KB)
Header - Biol.Unit 4
Biol.Unit 5 (112 KB)
Header - Biol.Unit 5
Biol.Unit 6 (108 KB)
Header - Biol.Unit 6
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