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4TLV
Asym. Unit
Info
Asym.Unit (621 KB)
Biol.Unit 1 (113 KB)
Biol.Unit 2 (111 KB)
Biol.Unit 3 (111 KB)
Biol.Unit 4 (112 KB)
Biol.Unit 5 (112 KB)
Biol.Unit 6 (108 KB)
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(1)
Title
:
CARDS TOXIN, NICKED
Authors
:
A. B. Taylor, O. N. Pakhomova, P. J. Hart
Date
:
30 May 14 (Deposition) - 08 Apr 15 (Release) - 13 May 15 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.90
Chains
:
Asym. Unit : A,B,C,D,E,F
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Biol. Unit 4: D (1x)
Biol. Unit 5: E (1x)
Biol. Unit 6: F (1x)
Keywords
:
Mycoplasma Pneumoniae, Virulence, Atypical Pneumonia, Community Acquired Respiratory Distress Syndrome, Adp-Ribosyl Transferase, Toxin, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. Becker, T. R. Kannan, A. B. Taylor, O. N. Pakhomova, Y. Zhang, S. R. Somarajan, A. Galaleldeen, S. P. Holloway, J. B. Baseman, P. J. Hart
Structure Of Cards Toxin, A Unique Adp-Ribosylating And Vacuolating Cytotoxin From Mycoplasma Pneumoniae.
Proc. Natl. Acad. Sci. Usa V. 112 5165 2015
[
close entry info
]
Hetero Components
(3, 36)
Info
All Hetero Components
1a: ACETATE ION (ACTa)
1b: ACETATE ION (ACTb)
1c: ACETATE ION (ACTc)
1d: ACETATE ION (ACTd)
2a: GLYCEROL (GOLa)
2aa: GLYCEROL (GOLaa)
2b: GLYCEROL (GOLb)
2c: GLYCEROL (GOLc)
2d: GLYCEROL (GOLd)
2e: GLYCEROL (GOLe)
2f: GLYCEROL (GOLf)
2g: GLYCEROL (GOLg)
2h: GLYCEROL (GOLh)
2i: GLYCEROL (GOLi)
2j: GLYCEROL (GOLj)
2k: GLYCEROL (GOLk)
2l: GLYCEROL (GOLl)
2m: GLYCEROL (GOLm)
2n: GLYCEROL (GOLn)
2o: GLYCEROL (GOLo)
2p: GLYCEROL (GOLp)
2q: GLYCEROL (GOLq)
2r: GLYCEROL (GOLr)
2s: GLYCEROL (GOLs)
2t: GLYCEROL (GOLt)
2u: GLYCEROL (GOLu)
2v: GLYCEROL (GOLv)
2w: GLYCEROL (GOLw)
2x: GLYCEROL (GOLx)
2y: GLYCEROL (GOLy)
2z: GLYCEROL (GOLz)
3a: SULFATE ION (SO4a)
3b: SULFATE ION (SO4b)
3c: SULFATE ION (SO4c)
3d: SULFATE ION (SO4d)
3e: SULFATE ION (SO4e)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ACT
4
Ligand/Ion
ACETATE ION
2
GOL
27
Ligand/Ion
GLYCEROL
3
SO4
5
Ligand/Ion
SULFATE ION
[
close Hetero Component info
]
Sites
(36, 36)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
13: AD4 (SOFTWARE)
14: AD5 (SOFTWARE)
15: AD6 (SOFTWARE)
16: AD7 (SOFTWARE)
17: AD8 (SOFTWARE)
18: AD9 (SOFTWARE)
19: AE1 (SOFTWARE)
20: AE2 (SOFTWARE)
21: AE3 (SOFTWARE)
22: AE4 (SOFTWARE)
23: AE5 (SOFTWARE)
24: AE6 (SOFTWARE)
25: AE7 (SOFTWARE)
26: AE8 (SOFTWARE)
27: AE9 (SOFTWARE)
28: AF1 (SOFTWARE)
29: AF2 (SOFTWARE)
30: AF3 (SOFTWARE)
31: AF4 (SOFTWARE)
32: AF5 (SOFTWARE)
33: AF6 (SOFTWARE)
34: AF7 (SOFTWARE)
35: AF8 (SOFTWARE)
36: AF9 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ARG A:6 , PHE A:7 , ARG A:145 , MET C:466 , LYS C:467 , HOH C:703 , HOH C:710
binding site for residue SO4 A 601
02
AC2
SOFTWARE
LYS A:251 , SER A:265 , HOH A:1054 , LYS B:251 , SER B:265
binding site for residue SO4 A 602
03
AC3
SOFTWARE
TYR A:263 , VAL A:267 , ALA A:436 , SER A:438 , HOH A:940 , HOH A:1065
binding site for residue GOL A 603
04
AC4
SOFTWARE
ARG A:102 , ARG A:113 , GLN A:117 , GLU A:522 , HOH A:982
binding site for residue GOL A 604
05
AC5
SOFTWARE
LYS A:467 , LEU A:541 , ASN A:542 , VAL A:584 , HOH A:832 , HOH A:836
binding site for residue GOL A 605
06
AC6
SOFTWARE
ILE A:58 , ARG A:59 , THR A:170 , THR A:171 , VAL A:432 , THR A:433 , MET A:434 , HOH A:800 , HOH A:823
binding site for residue GOL A 606
07
AC7
SOFTWARE
GLU A:156 , ALA A:160 , HIS A:161 , ASP A:423 , GLU A:424 , HIS A:428 , ALA A:429 , HOH A:828
binding site for residue ACT A 607
08
AC8
SOFTWARE
ARG A:91 , GLU A:95 , TYR A:475 , LEU A:477 , PHE A:528 , PHE A:588
binding site for residue ACT A 608
09
AC9
SOFTWARE
THR B:342 , GLN B:343 , HIS E:179
binding site for residue SO4 B 601
10
AD1
SOFTWARE
TYR B:263 , LEU B:270 , ARG B:435 , ALA B:436 , SER B:438 , GOL B:603 , HOH B:808
binding site for residue GOL B 602
11
AD2
SOFTWARE
HOH A:940 , LEU B:270 , GLU B:271 , ASP B:272 , LYS B:326 , ARG B:435 , GOL B:602 , HOH B:788
binding site for residue GOL B 603
12
AD3
SOFTWARE
ASN B:294 , ASN B:295 , ASP B:487 , ASN B:488 , HOH B:940
binding site for residue GOL B 604
13
AD4
SOFTWARE
TYR C:263 , ALA C:436 , SER C:438 , GOL C:602 , HOH C:915 , HOH C:1032
binding site for residue GOL C 601
14
AD5
SOFTWARE
GLU C:271 , ASP C:272 , LYS C:326 , ARG C:435 , GOL C:601 , HOH C:807 , HOH D:845
binding site for residue GOL C 602
15
AD6
SOFTWARE
LYS C:467 , LEU C:541 , ASN C:542 , VAL C:584 , HOH C:812
binding site for residue GOL C 603
16
AD7
SOFTWARE
THR C:502 , TYR C:504 , TRP C:506 , ASP C:507
binding site for residue GOL C 604
17
AD8
SOFTWARE
GLN C:293 , ASN C:294 , ASN C:295 , ASP C:487 , ASN C:488
binding site for residue GOL C 605
18
AD9
SOFTWARE
ARG C:547 , ASN C:552 , GLN C:554 , TYR C:571 , LYS C:573 , HOH C:955 , HOH C:1028
binding site for residue GOL C 606
19
AE1
SOFTWARE
HIS A:159 , PHE C:108 , ASP C:112 , ARG C:113 , GLU C:114 , HOH C:957
binding site for residue GOL C 607
20
AE2
SOFTWARE
LYS C:251 , SER C:265 , LYS D:251 , SER D:265
binding site for residue SO4 D 601
21
AE3
SOFTWARE
TYR D:263 , LEU D:270 , ALA D:436 , SER D:438 , HOH D:845 , HOH D:981
binding site for residue GOL D 602
22
AE4
SOFTWARE
ASN D:32 , PHE D:33 , PHE D:34 , TRP D:195 , LEU D:207 , SER D:208
binding site for residue GOL D 603
23
AE5
SOFTWARE
ARG D:102 , ARG D:113 , GLN D:117 , GLU D:522
binding site for residue GOL D 604
24
AE6
SOFTWARE
LYS D:467 , LEU D:541 , ASN D:542 , LEU D:583 , VAL D:584 , ASP D:586 , HOH D:819 , HOH D:864
binding site for residue GOL D 605
25
AE7
SOFTWARE
PRO D:54 , THR D:55 , LYS D:365 , GLU D:381 , GLY D:384
binding site for residue GOL D 606
26
AE8
SOFTWARE
ARG D:547 , ASN D:552 , GLN D:554 , TYR D:571 , LYS D:573 , HOH D:833
binding site for residue GOL D 607
27
AE9
SOFTWARE
GLU D:156 , ALA D:160 , HIS D:161 , ASP D:423 , GLU D:424 , HIS D:428 , ALA D:429 , HOH D:790
binding site for residue ACT D 608
28
AF1
SOFTWARE
MET B:466 , LYS B:467 , HOH B:729 , ARG E:6 , PHE E:7 , ARG E:145
binding site for residue SO4 E 601
29
AF2
SOFTWARE
TYR E:263 , ALA E:436 , SER E:438 , HOH E:885 , HOH E:893
binding site for residue GOL E 602
30
AF3
SOFTWARE
ARG E:102 , ARG E:113 , GLU E:522
binding site for residue GOL E 603
31
AF4
SOFTWARE
ASN E:32 , PHE E:33 , PHE E:34 , TRP E:195 , LEU E:207 , SER E:208
binding site for residue GOL E 604
32
AF5
SOFTWARE
PHE E:340 , SER E:353 , ASN E:361 , GLN E:362 , ASP E:470 , GLY E:471 , HOH E:982 , HOH E:984
binding site for residue GOL E 605
33
AF6
SOFTWARE
GLU E:156 , ALA E:160 , HIS E:161 , ASP E:423 , GLU E:424 , HIS E:428 , ALA E:429 , HOH E:783
binding site for residue ACT E 606
34
AF7
SOFTWARE
HOH E:885 , GLU F:271 , ASP F:272 , LYS F:326 , ARG F:435 , GOL F:602
binding site for residue GOL F 601
35
AF8
SOFTWARE
TYR F:263 , ALA F:436 , SER F:438 , GOL F:601 , HOH F:791 , HOH F:848
binding site for residue GOL F 602
36
AF9
SOFTWARE
HIS E:159 , ASP F:112 , ARG F:113 , GLU F:114
binding site for residue GOL F 603
[
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]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
;
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End label:
Sorry, no Info available
[
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(0, 0)
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CATH Domains
(0, 0)
Info
all CATH domains
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Sorry, no Info available
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Sorry, no Info available
[
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Atom Selection
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)
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