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4RYD
Biol. Unit 4
Info
Asym.Unit (492 KB)
Biol.Unit 1 (89 KB)
Biol.Unit 2 (88 KB)
Biol.Unit 3 (89 KB)
Biol.Unit 4 (88 KB)
Biol.Unit 5 (89 KB)
Biol.Unit 6 (88 KB)
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(1)
Title
:
X-RAY STRUCTURE OF HUMAN FURIN IN COMPLEX WITH THE COMPETITIVE INHIBITOR PARA-GUANIDINOMETHYL-PHAC-R-TLE-R-AMBA
Authors
:
S. O. Dahms, M. E. Than
Date
:
15 Dec 14 (Deposition) - 27 May 15 (Release) - 15 Jul 15 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.15
Chains
:
Asym. Unit : A,B,C,D,E,F,H,I,J,K,L,N
Biol. Unit 1: A,H (1x)
Biol. Unit 2: B,I (1x)
Biol. Unit 3: C,J (1x)
Biol. Unit 4: D,K (1x)
Biol. Unit 5: E,L (1x)
Biol. Unit 6: F,N (1x)
Keywords
:
Competitive Inhibitor, Pro-Protein Convertase, Serine Protease, Hydrolase-Hydrolase Inhibitor Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
K. Hardes, G. L. Becker, Y. Lu, S. O. Dahms, S. Kohler, W. Beyer, K. Sandvig, H. Yamamoto, I. Lindberg, L. Walz, V. Von Messling, M. E. Than, W. Garten, T. Steinmetzer
Novel Furin Inhibitors With Potent Anti-Infectious Activity
Chemmedchem V. 10 1218 2015
[
close entry info
]
Hetero Components
(4, 6)
Info
All Hetero Components
1a: 4-(AMINOMETHYL)BENZENECARBOXIMIDAM... (00Sa)
1b: 4-(AMINOMETHYL)BENZENECARBOXIMIDAM... (00Sb)
1c: 4-(AMINOMETHYL)BENZENECARBOXIMIDAM... (00Sc)
1d: 4-(AMINOMETHYL)BENZENECARBOXIMIDAM... (00Sd)
1e: 4-(AMINOMETHYL)BENZENECARBOXIMIDAM... (00Se)
1f: 4-(AMINOMETHYL)BENZENECARBOXIMIDAM... (00Sf)
2a: 1-[4-(2-OXOETHYL)BENZYL]GUANIDINE (2UEa)
2b: 1-[4-(2-OXOETHYL)BENZYL]GUANIDINE (2UEb)
2c: 1-[4-(2-OXOETHYL)BENZYL]GUANIDINE (2UEc)
2d: 1-[4-(2-OXOETHYL)BENZYL]GUANIDINE (2UEd)
2e: 1-[4-(2-OXOETHYL)BENZYL]GUANIDINE (2UEe)
2f: 1-[4-(2-OXOETHYL)BENZYL]GUANIDINE (2UEf)
3a: CALCIUM ION (CAa)
3b: CALCIUM ION (CAb)
3c: CALCIUM ION (CAc)
3d: CALCIUM ION (CAd)
3e: CALCIUM ION (CAe)
3f: CALCIUM ION (CAf)
3g: CALCIUM ION (CAg)
3h: CALCIUM ION (CAh)
3i: CALCIUM ION (CAi)
3j: CALCIUM ION (CAj)
3k: CALCIUM ION (CAk)
3l: CALCIUM ION (CAl)
3m: CALCIUM ION (CAm)
3n: CALCIUM ION (CAn)
3o: CALCIUM ION (CAo)
3p: CALCIUM ION (CAp)
3q: CALCIUM ION (CAq)
3r: CALCIUM ION (CAr)
4a: FORMIC ACID (FMTa)
4b: FORMIC ACID (FMTb)
4c: FORMIC ACID (FMTc)
4d: FORMIC ACID (FMTd)
4e: FORMIC ACID (FMTe)
4f: FORMIC ACID (FMTf)
4g: FORMIC ACID (FMTg)
4h: FORMIC ACID (FMTh)
4i: FORMIC ACID (FMTi)
4j: FORMIC ACID (FMTj)
4k: FORMIC ACID (FMTk)
4l: FORMIC ACID (FMTl)
4m: FORMIC ACID (FMTm)
4n: FORMIC ACID (FMTn)
4o: FORMIC ACID (FMTo)
4p: FORMIC ACID (FMTp)
4q: FORMIC ACID (FMTq)
4r: FORMIC ACID (FMTr)
5a: SODIUM ION (NAa)
5b: SODIUM ION (NAb)
5c: SODIUM ION (NAc)
5d: SODIUM ION (NAd)
5e: SODIUM ION (NAe)
5f: SODIUM ION (NAf)
6a: 3-METHYL-L-VALINE (TBGa)
6b: 3-METHYL-L-VALINE (TBGb)
6c: 3-METHYL-L-VALINE (TBGc)
6d: 3-METHYL-L-VALINE (TBGd)
6e: 3-METHYL-L-VALINE (TBGe)
6f: 3-METHYL-L-VALINE (TBGf)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
00S
1
Mod. Amino Acid
4-(AMINOMETHYL)BENZENECARBOXIMIDAMIDE
2
2UE
1
Mod. Amino Acid
1-[4-(2-OXOETHYL)BENZYL]GUANIDINE
3
CA
-1
Ligand/Ion
CALCIUM ION
4
FMT
3
Ligand/Ion
FORMIC ACID
5
NA
-1
Ligand/Ion
SODIUM ION
6
TBG
1
Mod. Amino Acid
3-METHYL-L-VALINE
[
close Hetero Component info
]
Sites
(11, 11)
Info
All Sites
01: BC1 (SOFTWARE)
02: BC7 (SOFTWARE)
03: BC8 (SOFTWARE)
04: CC4 (SOFTWARE)
05: CC5 (SOFTWARE)
06: CC6 (SOFTWARE)
07: CC7 (SOFTWARE)
08: CC8 (SOFTWARE)
09: CC9 (SOFTWARE)
10: DC1 (SOFTWARE)
11: FC1 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
BC1
SOFTWARE
THR B:365 , HOH B:831 , ARG D:298
BINDING SITE FOR RESIDUE FMT B 603
02
BC7
SOFTWARE
PHE C:275 , GLN C:447 , FMT C:603 , HOH C:785 , ARG D:276 , GLN D:280
BINDING SITE FOR RESIDUE FMT C 602
03
BC8
SOFTWARE
PHE C:275 , TYR C:313 , LYS C:449 , TYR C:571 , FMT C:602 , ARG D:276
BINDING SITE FOR RESIDUE FMT C 603
04
CC4
SOFTWARE
ARG C:276 , GLN C:280 , TYR D:313 , GLN D:447 , FMT D:602 , HOH D:772
BINDING SITE FOR RESIDUE FMT D 601
05
CC5
SOFTWARE
ARG C:276 , PHE D:275 , TYR D:313 , LYS D:449 , FMT D:601
BINDING SITE FOR RESIDUE FMT D 602
06
CC6
SOFTWARE
ARG B:298 , TRP D:328 , THR D:365 , GLY D:366
BINDING SITE FOR RESIDUE FMT D 603
07
CC7
SOFTWARE
ASP D:115 , ASP D:162 , VAL D:205 , ASN D:208 , VAL D:210 , GLY D:212
BINDING SITE FOR RESIDUE CA D 604
08
CC8
SOFTWARE
ASP D:258 , ASP D:301 , GLU D:331 , HOH D:710 , HOH D:727 , HOH D:832
BINDING SITE FOR RESIDUE CA D 605
09
CC9
SOFTWARE
ASP D:174 , ASP D:179 , ASP D:181 , HOH D:722 , HOH D:754 , HOH D:833
BINDING SITE FOR RESIDUE CA D 606
10
DC1
SOFTWARE
THR D:309 , SER D:311 , THR D:314 , HOH D:723
BINDING SITE FOR RESIDUE NA D 607
11
FC1
SOFTWARE
ASP D:154 , ASP D:191 , ASN D:192 , HIS D:194 , VAL D:231 , THR D:232 , ASP D:233 , GLU D:236 , SER D:253 , TRP D:254 , GLY D:255 , PRO D:256 , GLU D:257 , ASP D:258 , ASP D:264 , GLY D:265 , ALA D:292 , ASP D:306 , TYR D:308 , THR D:309 , THR D:367 , SER D:368 , HOH D:1011 , HOH D:1012 , HOH K:101 , HOH K:102 , HOH K:103 , HOH K:104 , HOH K:105 , HOH K:106 , HOH K:107
BINDING SITE FOR CHAIN K OF PARA-GUANIDINOMETHYL -PHENYLACETYL-ARG-(3-METHYLVALINE)-ARG- (AMIDOMETHYL)BENZAMIDINE
[
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]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
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PROSITE Patterns/Profiles
(, 0)
Info
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;
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End label:
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Exons
(0, 0)
Info
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(0, 0)
Info
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Sorry, no Info available
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CATH Domains
(0, 0)
Info
all CATH domains
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Sorry, no Info available
[
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Sorry, no Info available
[
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Chain D
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Asymmetric Unit 1
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Miscellaneous
Script
Example Commands
Example Command
Action
select :A, :C
select chains 'A' and 'C'
select [ALA]:A
select all 'ALA' residues (Alanines) in chain 'A'
select 5-10
select residue range 5 to 10 in all chains
select 5-10:A
select residue range 5 to 10 in chain 'A'
select protein & not helix & not sheet
select non-helix/non-sheet protein parts
set fontsize 20
set label size to 20 (allowed range: 1-58)
ssbonds 100
show SS bonds with a radius of 100 units (=0.4Å)
wireframe 100
show bonds with a radius of 100 units (=0.4Å)
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Show PDB file:
Asym.Unit (492 KB)
Header - Asym.Unit
Biol.Unit 1 (89 KB)
Header - Biol.Unit 1
Biol.Unit 2 (88 KB)
Header - Biol.Unit 2
Biol.Unit 3 (89 KB)
Header - Biol.Unit 3
Biol.Unit 4 (88 KB)
Header - Biol.Unit 4
Biol.Unit 5 (89 KB)
Header - Biol.Unit 5
Biol.Unit 6 (88 KB)
Header - Biol.Unit 6
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