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4RMO
Biol. Unit 2
Info
Asym.Unit (414 KB)
Biol.Unit 1 (105 KB)
Biol.Unit 2 (107 KB)
Biol.Unit 3 (105 KB)
Biol.Unit 4 (104 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE CPTIN TYPE III TOXIN-ANTITOXIN SYSTEM FROM EUBACTERIUM RECTALE
Authors
:
F. Rao, J. E. Voss, F. L. Short, B. F. Luisi
Date
:
21 Oct 14 (Deposition) - 30 Sep 15 (Release) - 18 Nov 15 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.20
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P
Biol. Unit 1: A,B,E,F (1x)
Biol. Unit 2: C,D,G,H (1x)
Biol. Unit 3: I,J,K,L (1x)
Biol. Unit 4: M,N,O,P (1x)
Keywords
:
Protein-Rna Complex, Pseudoknot, Rna Twist, Toxin-Antitoxin, Type Iii, Bacteriophage Resistance, Toxin-Rna Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
F. Rao, F. L. Short, J. E. Voss, T. R. Blower, A. L. Orme, T. E. Whittaker, B. F. Luisi, G. P. Salmond
Co-Evolution Of Quaternary Organization And Novel Rna Tertiary Interactions Revealed In The Crystal Structure Of Bacterial Protein-Rna Toxin-Antitoxin System.
Nucleic Acids Res. V. 43 9529 2015
[
close entry info
]
Hetero Components
(2, 12)
Info
All Hetero Components
1a: ADENOSINE-5'-PHOSPHATE-2',3'-CYCLI... (A23a)
1b: ADENOSINE-5'-PHOSPHATE-2',3'-CYCLI... (A23b)
1c: ADENOSINE-5'-PHOSPHATE-2',3'-CYCLI... (A23c)
1d: ADENOSINE-5'-PHOSPHATE-2',3'-CYCLI... (A23d)
1e: ADENOSINE-5'-PHOSPHATE-2',3'-CYCLI... (A23e)
1f: ADENOSINE-5'-PHOSPHATE-2',3'-CYCLI... (A23f)
1g: ADENOSINE-5'-PHOSPHATE-2',3'-CYCLI... (A23g)
1h: ADENOSINE-5'-PHOSPHATE-2',3'-CYCLI... (A23h)
2a: CALCIUM ION (CAa)
2aa: CALCIUM ION (CAaa)
2ab: CALCIUM ION (CAab)
2ac: CALCIUM ION (CAac)
2ad: CALCIUM ION (CAad)
2ae: CALCIUM ION (CAae)
2af: CALCIUM ION (CAaf)
2ag: CALCIUM ION (CAag)
2ah: CALCIUM ION (CAah)
2ai: CALCIUM ION (CAai)
2aj: CALCIUM ION (CAaj)
2ak: CALCIUM ION (CAak)
2al: CALCIUM ION (CAal)
2am: CALCIUM ION (CAam)
2an: CALCIUM ION (CAan)
2ao: CALCIUM ION (CAao)
2ap: CALCIUM ION (CAap)
2aq: CALCIUM ION (CAaq)
2ar: CALCIUM ION (CAar)
2as: CALCIUM ION (CAas)
2at: CALCIUM ION (CAat)
2au: CALCIUM ION (CAau)
2av: CALCIUM ION (CAav)
2b: CALCIUM ION (CAb)
2c: CALCIUM ION (CAc)
2d: CALCIUM ION (CAd)
2e: CALCIUM ION (CAe)
2f: CALCIUM ION (CAf)
2g: CALCIUM ION (CAg)
2h: CALCIUM ION (CAh)
2i: CALCIUM ION (CAi)
2j: CALCIUM ION (CAj)
2k: CALCIUM ION (CAk)
2l: CALCIUM ION (CAl)
2m: CALCIUM ION (CAm)
2n: CALCIUM ION (CAn)
2o: CALCIUM ION (CAo)
2p: CALCIUM ION (CAp)
2q: CALCIUM ION (CAq)
2r: CALCIUM ION (CAr)
2s: CALCIUM ION (CAs)
2t: CALCIUM ION (CAt)
2u: CALCIUM ION (CAu)
2v: CALCIUM ION (CAv)
2w: CALCIUM ION (CAw)
2x: CALCIUM ION (CAx)
2y: CALCIUM ION (CAy)
2z: CALCIUM ION (CAz)
3a: SELENOMETHIONINE (MSEa)
3aa: SELENOMETHIONINE (MSEaa)
3ab: SELENOMETHIONINE (MSEab)
3ac: SELENOMETHIONINE (MSEac)
3ad: SELENOMETHIONINE (MSEad)
3ae: SELENOMETHIONINE (MSEae)
3af: SELENOMETHIONINE (MSEaf)
3ag: SELENOMETHIONINE (MSEag)
3ah: SELENOMETHIONINE (MSEah)
3ai: SELENOMETHIONINE (MSEai)
3aj: SELENOMETHIONINE (MSEaj)
3ak: SELENOMETHIONINE (MSEak)
3al: SELENOMETHIONINE (MSEal)
3am: SELENOMETHIONINE (MSEam)
3an: SELENOMETHIONINE (MSEan)
3b: SELENOMETHIONINE (MSEb)
3c: SELENOMETHIONINE (MSEc)
3d: SELENOMETHIONINE (MSEd)
3e: SELENOMETHIONINE (MSEe)
3f: SELENOMETHIONINE (MSEf)
3g: SELENOMETHIONINE (MSEg)
3h: SELENOMETHIONINE (MSEh)
3i: SELENOMETHIONINE (MSEi)
3j: SELENOMETHIONINE (MSEj)
3k: SELENOMETHIONINE (MSEk)
3l: SELENOMETHIONINE (MSEl)
3m: SELENOMETHIONINE (MSEm)
3n: SELENOMETHIONINE (MSEn)
3o: SELENOMETHIONINE (MSEo)
3p: SELENOMETHIONINE (MSEp)
3q: SELENOMETHIONINE (MSEq)
3r: SELENOMETHIONINE (MSEr)
3s: SELENOMETHIONINE (MSEs)
3t: SELENOMETHIONINE (MSEt)
3u: SELENOMETHIONINE (MSEu)
3v: SELENOMETHIONINE (MSEv)
3w: SELENOMETHIONINE (MSEw)
3x: SELENOMETHIONINE (MSEx)
3y: SELENOMETHIONINE (MSEy)
3z: SELENOMETHIONINE (MSEz)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
A23
2
Mod. Nucleotide
ADENOSINE-5'-PHOSPHATE-2',3'-CYCLIC PHOSPHATE
2
CA
-1
Ligand/Ion
CALCIUM ION
3
MSE
10
Mod. Amino Acid
SELENOMETHIONINE
[
close Hetero Component info
]
Sites
(14, 14)
Info
All Sites
01: AC7 (SOFTWARE)
02: AC8 (SOFTWARE)
03: AC9 (SOFTWARE)
04: BC1 (SOFTWARE)
05: BC2 (SOFTWARE)
06: BC3 (SOFTWARE)
07: BC4 (SOFTWARE)
08: CC1 (SOFTWARE)
09: CC2 (SOFTWARE)
10: CC3 (SOFTWARE)
11: CC4 (SOFTWARE)
12: CC5 (SOFTWARE)
13: CC6 (SOFTWARE)
14: CC7 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC7
SOFTWARE
ASP C:80 , HOH C:387 , A H:14 , HOH H:203 , HOH H:225 , HOH H:235
BINDING SITE FOR RESIDUE CA C 201
02
AC8
SOFTWARE
HOH D:214 , HOH D:268 , HOH D:270 , HOH D:283 , HOH D:288
BINDING SITE FOR RESIDUE CA D 101
03
AC9
SOFTWARE
HOH D:201 , HOH D:220 , HOH D:237 , HOH D:267 , HOH D:285 , HOH D:291
BINDING SITE FOR RESIDUE CA D 102
04
BC1
SOFTWARE
G D:24 , HOH D:202 , HOH D:203 , HOH D:209 , HOH D:210 , HOH D:211
BINDING SITE FOR RESIDUE CA D 103
05
BC2
SOFTWARE
HOH D:231 , HOH D:250 , HOH D:252 , HOH D:278 , HOH D:284
BINDING SITE FOR RESIDUE CA D 104
06
BC3
SOFTWARE
U D:19 , HOH D:204 , HOH D:205 , HOH D:274 , HOH D:280
BINDING SITE FOR RESIDUE CA D 105
07
BC4
SOFTWARE
G D:41 , HOH D:206 , HOH D:207 , HOH D:208 , HOH D:276 , HOH D:282
BINDING SITE FOR RESIDUE CA D 106
08
CC1
SOFTWARE
A D:14 , HOH D:223 , HOH D:224 , HOH D:279 , ASP G:80 , HOH G:330
BINDING SITE FOR RESIDUE CA G 201
09
CC2
SOFTWARE
HOH H:212 , HOH H:259 , HOH H:262 , HOH H:280
BINDING SITE FOR RESIDUE CA H 101
10
CC3
SOFTWARE
U H:19 , HOH H:204 , HOH H:264 , HOH H:274
BINDING SITE FOR RESIDUE CA H 102
11
CC4
SOFTWARE
HOH H:227 , HOH H:232 , HOH H:252 , HOH H:267 , HOH H:294
BINDING SITE FOR RESIDUE CA H 103
12
CC5
SOFTWARE
G H:41 , HOH H:205 , HOH H:206 , HOH H:207 , HOH H:249
BINDING SITE FOR RESIDUE CA H 104
13
CC6
SOFTWARE
G H:24 , HOH H:208 , HOH H:209 , HOH H:210 , HOH H:253 , HOH H:279
BINDING SITE FOR RESIDUE CA H 105
14
CC7
SOFTWARE
U H:43 , HOH H:270 , HOH H:273 , HOH H:298 , HOH H:300 , HOH J:230
BINDING SITE FOR RESIDUE CA H 106
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
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Sorry, no Info available
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PROSITE Patterns/Profiles
(, 0)
Info
All PROSITE Patterns/Profiles
;
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End label:
Sorry, no Info available
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Exons
(0, 0)
Info
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(0, 0)
Info
All SCOP Domains
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Label:
Sorry, no Info available
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CATH Domains
(0, 0)
Info
all CATH domains
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Label:
Sorry, no Info available
[
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Sorry, no Info available
[
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Asymmetric Unit 1
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Asym.Unit (414 KB)
Header - Asym.Unit
Biol.Unit 1 (105 KB)
Header - Biol.Unit 1
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Header - Biol.Unit 2
Biol.Unit 3 (105 KB)
Header - Biol.Unit 3
Biol.Unit 4 (104 KB)
Header - Biol.Unit 4
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