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Asym. Unit
Info
Asym.Unit (414 KB)
Biol.Unit 1 (105 KB)
Biol.Unit 2 (107 KB)
Biol.Unit 3 (105 KB)
Biol.Unit 4 (104 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE CPTIN TYPE III TOXIN-ANTITOXIN SYSTEM FROM EUBACTERIUM RECTALE
Authors
:
F. Rao, J. E. Voss, F. L. Short, B. F. Luisi
Date
:
21 Oct 14 (Deposition) - 30 Sep 15 (Release) - 18 Nov 15 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.20
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P
Biol. Unit 1: A,B,E,F (1x)
Biol. Unit 2: C,D,G,H (1x)
Biol. Unit 3: I,J,K,L (1x)
Biol. Unit 4: M,N,O,P (1x)
Keywords
:
Protein-Rna Complex, Pseudoknot, Rna Twist, Toxin-Antitoxin, Type Iii, Bacteriophage Resistance, Toxin-Rna Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
F. Rao, F. L. Short, J. E. Voss, T. R. Blower, A. L. Orme, T. E. Whittaker, B. F. Luisi, G. P. Salmond
Co-Evolution Of Quaternary Organization And Novel Rna Tertiary Interactions Revealed In The Crystal Structure Of Bacterial Protein-Rna Toxin-Antitoxin System.
Nucleic Acids Res. V. 43 9529 2015
[
close entry info
]
Hetero Components
(3, 96)
Info
All Hetero Components
1a: ADENOSINE-5'-PHOSPHATE-2',3'-CYCLI... (A23a)
1b: ADENOSINE-5'-PHOSPHATE-2',3'-CYCLI... (A23b)
1c: ADENOSINE-5'-PHOSPHATE-2',3'-CYCLI... (A23c)
1d: ADENOSINE-5'-PHOSPHATE-2',3'-CYCLI... (A23d)
1e: ADENOSINE-5'-PHOSPHATE-2',3'-CYCLI... (A23e)
1f: ADENOSINE-5'-PHOSPHATE-2',3'-CYCLI... (A23f)
1g: ADENOSINE-5'-PHOSPHATE-2',3'-CYCLI... (A23g)
1h: ADENOSINE-5'-PHOSPHATE-2',3'-CYCLI... (A23h)
2a: CALCIUM ION (CAa)
2aa: CALCIUM ION (CAaa)
2ab: CALCIUM ION (CAab)
2ac: CALCIUM ION (CAac)
2ad: CALCIUM ION (CAad)
2ae: CALCIUM ION (CAae)
2af: CALCIUM ION (CAaf)
2ag: CALCIUM ION (CAag)
2ah: CALCIUM ION (CAah)
2ai: CALCIUM ION (CAai)
2aj: CALCIUM ION (CAaj)
2ak: CALCIUM ION (CAak)
2al: CALCIUM ION (CAal)
2am: CALCIUM ION (CAam)
2an: CALCIUM ION (CAan)
2ao: CALCIUM ION (CAao)
2ap: CALCIUM ION (CAap)
2aq: CALCIUM ION (CAaq)
2ar: CALCIUM ION (CAar)
2as: CALCIUM ION (CAas)
2at: CALCIUM ION (CAat)
2au: CALCIUM ION (CAau)
2av: CALCIUM ION (CAav)
2b: CALCIUM ION (CAb)
2c: CALCIUM ION (CAc)
2d: CALCIUM ION (CAd)
2e: CALCIUM ION (CAe)
2f: CALCIUM ION (CAf)
2g: CALCIUM ION (CAg)
2h: CALCIUM ION (CAh)
2i: CALCIUM ION (CAi)
2j: CALCIUM ION (CAj)
2k: CALCIUM ION (CAk)
2l: CALCIUM ION (CAl)
2m: CALCIUM ION (CAm)
2n: CALCIUM ION (CAn)
2o: CALCIUM ION (CAo)
2p: CALCIUM ION (CAp)
2q: CALCIUM ION (CAq)
2r: CALCIUM ION (CAr)
2s: CALCIUM ION (CAs)
2t: CALCIUM ION (CAt)
2u: CALCIUM ION (CAu)
2v: CALCIUM ION (CAv)
2w: CALCIUM ION (CAw)
2x: CALCIUM ION (CAx)
2y: CALCIUM ION (CAy)
2z: CALCIUM ION (CAz)
3a: SELENOMETHIONINE (MSEa)
3aa: SELENOMETHIONINE (MSEaa)
3ab: SELENOMETHIONINE (MSEab)
3ac: SELENOMETHIONINE (MSEac)
3ad: SELENOMETHIONINE (MSEad)
3ae: SELENOMETHIONINE (MSEae)
3af: SELENOMETHIONINE (MSEaf)
3ag: SELENOMETHIONINE (MSEag)
3ah: SELENOMETHIONINE (MSEah)
3ai: SELENOMETHIONINE (MSEai)
3aj: SELENOMETHIONINE (MSEaj)
3ak: SELENOMETHIONINE (MSEak)
3al: SELENOMETHIONINE (MSEal)
3am: SELENOMETHIONINE (MSEam)
3an: SELENOMETHIONINE (MSEan)
3b: SELENOMETHIONINE (MSEb)
3c: SELENOMETHIONINE (MSEc)
3d: SELENOMETHIONINE (MSEd)
3e: SELENOMETHIONINE (MSEe)
3f: SELENOMETHIONINE (MSEf)
3g: SELENOMETHIONINE (MSEg)
3h: SELENOMETHIONINE (MSEh)
3i: SELENOMETHIONINE (MSEi)
3j: SELENOMETHIONINE (MSEj)
3k: SELENOMETHIONINE (MSEk)
3l: SELENOMETHIONINE (MSEl)
3m: SELENOMETHIONINE (MSEm)
3n: SELENOMETHIONINE (MSEn)
3o: SELENOMETHIONINE (MSEo)
3p: SELENOMETHIONINE (MSEp)
3q: SELENOMETHIONINE (MSEq)
3r: SELENOMETHIONINE (MSEr)
3s: SELENOMETHIONINE (MSEs)
3t: SELENOMETHIONINE (MSEt)
3u: SELENOMETHIONINE (MSEu)
3v: SELENOMETHIONINE (MSEv)
3w: SELENOMETHIONINE (MSEw)
3x: SELENOMETHIONINE (MSEx)
3y: SELENOMETHIONINE (MSEy)
3z: SELENOMETHIONINE (MSEz)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
A23
8
Mod. Nucleotide
ADENOSINE-5'-PHOSPHATE-2',3'-CYCLIC PHOSPHATE
2
CA
48
Ligand/Ion
CALCIUM ION
3
MSE
40
Mod. Amino Acid
SELENOMETHIONINE
[
close Hetero Component info
]
Sites
(48, 48)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
26: CC8 (SOFTWARE)
27: CC9 (SOFTWARE)
28: DC1 (SOFTWARE)
29: DC2 (SOFTWARE)
30: DC3 (SOFTWARE)
31: DC4 (SOFTWARE)
32: DC5 (SOFTWARE)
33: DC6 (SOFTWARE)
34: DC7 (SOFTWARE)
35: DC8 (SOFTWARE)
36: DC9 (SOFTWARE)
37: EC1 (SOFTWARE)
38: EC2 (SOFTWARE)
39: EC3 (SOFTWARE)
40: EC4 (SOFTWARE)
41: EC5 (SOFTWARE)
42: EC6 (SOFTWARE)
43: EC7 (SOFTWARE)
44: EC8 (SOFTWARE)
45: EC9 (SOFTWARE)
46: FC1 (SOFTWARE)
47: FC2 (SOFTWARE)
48: FC3 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ASP A:80 , HOH A:381 , A F:14 , HOH F:220 , HOH F:222 , HOH F:223
BINDING SITE FOR RESIDUE CA A 201
02
AC2
SOFTWARE
U B:19 , HOH B:213 , HOH B:245 , HOH B:285
BINDING SITE FOR RESIDUE CA B 101
03
AC3
SOFTWARE
G B:13 , HOH B:203 , HOH B:233 , HOH B:244 , HOH B:260 , HOH B:277 , HOH B:281
BINDING SITE FOR RESIDUE CA B 102
04
AC4
SOFTWARE
G B:41 , HOH B:201 , HOH B:223 , HOH B:237 , HOH B:272 , HOH B:276
BINDING SITE FOR RESIDUE CA B 103
05
AC5
SOFTWARE
HOH B:202 , HOH B:275 , HOH B:288 , HOH B:289 , HOH B:298 , HOH B:299
BINDING SITE FOR RESIDUE CA B 104
06
AC6
SOFTWARE
A B:31 , A B:32 , HOH B:236 , HOH B:293 , HOH B:294
BINDING SITE FOR RESIDUE CA B 105
07
AC7
SOFTWARE
ASP C:80 , HOH C:387 , A H:14 , HOH H:203 , HOH H:225 , HOH H:235
BINDING SITE FOR RESIDUE CA C 201
08
AC8
SOFTWARE
HOH D:214 , HOH D:268 , HOH D:270 , HOH D:283 , HOH D:288
BINDING SITE FOR RESIDUE CA D 101
09
AC9
SOFTWARE
HOH D:201 , HOH D:220 , HOH D:237 , HOH D:267 , HOH D:285 , HOH D:291
BINDING SITE FOR RESIDUE CA D 102
10
BC1
SOFTWARE
G D:24 , HOH D:202 , HOH D:203 , HOH D:209 , HOH D:210 , HOH D:211
BINDING SITE FOR RESIDUE CA D 103
11
BC2
SOFTWARE
HOH D:231 , HOH D:250 , HOH D:252 , HOH D:278 , HOH D:284
BINDING SITE FOR RESIDUE CA D 104
12
BC3
SOFTWARE
U D:19 , HOH D:204 , HOH D:205 , HOH D:274 , HOH D:280
BINDING SITE FOR RESIDUE CA D 105
13
BC4
SOFTWARE
G D:41 , HOH D:206 , HOH D:207 , HOH D:208 , HOH D:276 , HOH D:282
BINDING SITE FOR RESIDUE CA D 106
14
BC5
SOFTWARE
A B:14 , HOH B:215 , HOH B:216 , HOH B:231 , ASP E:80 , HOH E:301 , HOH E:302
BINDING SITE FOR RESIDUE CA E 201
15
BC6
SOFTWARE
U F:19 , HOH F:214
BINDING SITE FOR RESIDUE CA F 101
16
BC7
SOFTWARE
G F:13 , G F:17 , HOH F:205 , HOH F:221 , HOH F:244
BINDING SITE FOR RESIDUE CA F 102
17
BC8
SOFTWARE
HOH A:379 , G F:41 , HOH F:203 , HOH F:204
BINDING SITE FOR RESIDUE CA F 103
18
BC9
SOFTWARE
U F:34 , G F:35 , HOH F:202 , HOH F:232 , HOH F:234 , HOH F:252
BINDING SITE FOR RESIDUE CA F 104
19
CC1
SOFTWARE
A D:14 , HOH D:223 , HOH D:224 , HOH D:279 , ASP G:80 , HOH G:330
BINDING SITE FOR RESIDUE CA G 201
20
CC2
SOFTWARE
HOH H:212 , HOH H:259 , HOH H:262 , HOH H:280
BINDING SITE FOR RESIDUE CA H 101
21
CC3
SOFTWARE
U H:19 , HOH H:204 , HOH H:264 , HOH H:274
BINDING SITE FOR RESIDUE CA H 102
22
CC4
SOFTWARE
HOH H:227 , HOH H:232 , HOH H:252 , HOH H:267 , HOH H:294
BINDING SITE FOR RESIDUE CA H 103
23
CC5
SOFTWARE
G H:41 , HOH H:205 , HOH H:206 , HOH H:207 , HOH H:249
BINDING SITE FOR RESIDUE CA H 104
24
CC6
SOFTWARE
G H:24 , HOH H:208 , HOH H:209 , HOH H:210 , HOH H:253 , HOH H:279
BINDING SITE FOR RESIDUE CA H 105
25
CC7
SOFTWARE
U H:43 , HOH H:270 , HOH H:273 , HOH H:298 , HOH H:300 , HOH J:230
BINDING SITE FOR RESIDUE CA H 106
26
CC8
SOFTWARE
ASP I:80 , HOH I:379 , A L:14 , HOH L:205 , HOH L:228 , HOH L:268
BINDING SITE FOR RESIDUE CA I 201
27
CC9
SOFTWARE
U J:19 , HOH J:203 , HOH J:285
BINDING SITE FOR RESIDUE CA J 101
28
DC1
SOFTWARE
HOH J:201 , HOH J:222 , HOH J:255
BINDING SITE FOR RESIDUE CA J 102
29
DC2
SOFTWARE
G J:24 , HOH J:205 , HOH J:206 , HOH J:211 , HOH J:228 , HOH J:237 , HOH J:286
BINDING SITE FOR RESIDUE CA J 103
30
DC3
SOFTWARE
G J:13 , HOH J:242 , HOH J:246 , HOH J:272 , HOH J:281
BINDING SITE FOR RESIDUE CA J 104
31
DC4
SOFTWARE
G J:41 , HOH J:209 , HOH J:210 , HOH J:241 , HOH J:276 , HOH J:277
BINDING SITE FOR RESIDUE CA J 105
32
DC5
SOFTWARE
A J:7 , HOH J:247 , HOH J:293 , HOH J:294
BINDING SITE FOR RESIDUE CA J 106
33
DC6
SOFTWARE
A J:14 , HOH J:297 , HOH J:298 , HOH J:299 , ASP K:80 , HOH K:325
BINDING SITE FOR RESIDUE CA K 201
34
DC7
SOFTWARE
HOH L:201 , HOH L:214 , HOH L:275
BINDING SITE FOR RESIDUE CA L 101
35
DC8
SOFTWARE
U L:19 , HOH L:229 , HOH L:277
BINDING SITE FOR RESIDUE CA L 102
36
DC9
SOFTWARE
U L:34 , G L:35 , HOH L:204 , HOH L:206 , HOH L:234 , HOH L:252 , HOH L:276
BINDING SITE FOR RESIDUE CA L 103
37
EC1
SOFTWARE
G L:41 , HOH L:207 , HOH L:208 , HOH L:209 , HOH L:269
BINDING SITE FOR RESIDUE CA L 104
38
EC2
SOFTWARE
G L:13 , G L:17 , HOH L:210 , HOH L:212
BINDING SITE FOR RESIDUE CA L 105
39
EC3
SOFTWARE
ASP M:80 , HOH M:353 , A P:14 , HOH P:211 , HOH P:229
BINDING SITE FOR RESIDUE CA M 201
40
EC4
SOFTWARE
HOH N:212 , HOH N:226 , HOH N:269 , HOH N:277 , HOH N:278
BINDING SITE FOR RESIDUE CA N 101
41
EC5
SOFTWARE
HOH N:203 , HOH N:217 , HOH N:219 , HOH N:234 , HOH N:239 , HOH N:265
BINDING SITE FOR RESIDUE CA N 102
42
EC6
SOFTWARE
G N:41 , HOH N:222 , HOH N:227 , HOH N:238 , HOH N:264 , HOH O:301
BINDING SITE FOR RESIDUE CA N 103
43
EC7
SOFTWARE
U N:19 , HOH N:262 , HOH N:268 , HOH N:282
BINDING SITE FOR RESIDUE CA N 104
44
EC8
SOFTWARE
G N:24 , HOH N:204 , HOH N:205 , HOH N:263
BINDING SITE FOR RESIDUE CA N 105
45
EC9
SOFTWARE
A N:14 , HOH N:202 , HOH N:240 , HOH N:258 , ASP O:80 , HOH O:319
BINDING SITE FOR RESIDUE CA O 201
46
FC1
SOFTWARE
U P:34 , G P:35 , HOH P:213 , HOH P:237 , HOH P:253
BINDING SITE FOR RESIDUE CA P 101
47
FC2
SOFTWARE
HOH M:352 , G P:41 , HOH P:206 , HOH P:214
BINDING SITE FOR RESIDUE CA P 102
48
FC3
SOFTWARE
G P:13 , HOH P:208 , HOH P:209 , HOH P:210
BINDING SITE FOR RESIDUE CA P 103
[
close Site info
]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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PROSITE Patterns/Profiles
(0, 0)
Info
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;
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End label:
Sorry, no Info available
[
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]
Exons
(0, 0)
Info
All Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
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CATH Domains
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all CATH domains
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Sorry, no Info available
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Sorry, no Info available
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