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4R5Z
Asym. Unit
Info
Asym.Unit (252 KB)
Biol.Unit 1 (126 KB)
Biol.Unit 2 (125 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF RV3772 ENCODED AMINOTRANSFERASE
Authors
:
N. Nasir, A. Anant, R. Vyas, B. K. Biswal
Date
:
22 Aug 14 (Deposition) - 26 Aug 15 (Release) - 07 Dec 16 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.95
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Keywords
:
Aminotransferase, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
N. Nasir, A. Anant, R. Vyas, B. K. Biswal
Crystal Structures Of Mycobacterium Tuberculosis Hspat And Arat Reveal Structural Basis Of Their Distinct Substrate Specificities
Sci Rep V. 6 18880 2016
[
close entry info
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Hetero Components
(4, 32)
Info
All Hetero Components
1a: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ET... (EPEa)
1b: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ET... (EPEb)
1c: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ET... (EPEc)
1d: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ET... (EPEd)
2a: GLYCEROL (GOLa)
2b: GLYCEROL (GOLb)
2c: GLYCEROL (GOLc)
2d: GLYCEROL (GOLd)
2e: GLYCEROL (GOLe)
2f: GLYCEROL (GOLf)
2g: GLYCEROL (GOLg)
2h: GLYCEROL (GOLh)
2i: GLYCEROL (GOLi)
2j: GLYCEROL (GOLj)
2k: GLYCEROL (GOLk)
2l: GLYCEROL (GOLl)
2m: GLYCEROL (GOLm)
2n: GLYCEROL (GOLn)
2o: GLYCEROL (GOLo)
2p: GLYCEROL (GOLp)
2q: GLYCEROL (GOLq)
2r: GLYCEROL (GOLr)
2s: GLYCEROL (GOLs)
2t: GLYCEROL (GOLt)
3a: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOS... (PMPa)
3b: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOS... (PMPb)
3c: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOS... (PMPc)
3d: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOS... (PMPd)
4a: SUCCINIC ACID (SINa)
4b: SUCCINIC ACID (SINb)
4c: SUCCINIC ACID (SINc)
4d: SUCCINIC ACID (SINd)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
EPE
4
Ligand/Ion
4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID
2
GOL
20
Ligand/Ion
GLYCEROL
3
PMP
4
Ligand/Ion
4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE
4
SIN
4
Ligand/Ion
SUCCINIC ACID
[
close Hetero Component info
]
Sites
(32, 32)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
26: CC8 (SOFTWARE)
27: CC9 (SOFTWARE)
28: DC1 (SOFTWARE)
29: DC2 (SOFTWARE)
30: DC3 (SOFTWARE)
31: DC4 (SOFTWARE)
32: DC5 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
TYR A:15 , PRO A:17 , GLY A:18 , SER A:29 , ASN A:157 , ARG A:322 , ARG A:330 , PMP A:402 , HOH A:573 , TYR B:54 , PHE B:246
BINDING SITE FOR RESIDUE SIN A 401
02
AC2
SOFTWARE
GLY A:84 , SER A:85 , VAL A:86 , PHE A:110 , CYS A:153 , ASN A:157 , ASP A:184 , ALA A:186 , TYR A:187 , THR A:214 , SER A:216 , LYS A:217 , ARG A:225 , SIN A:401 , TYR B:54
BINDING SITE FOR RESIDUE PMP A 402
03
AC3
SOFTWARE
VAL A:14 , TYR A:15 , LEU A:112 , PRO A:115 , GLN A:116 , HOH A:514 , HOH A:851 , LYS B:241 , TYR B:243 , PRO B:245
BINDING SITE FOR RESIDUE GOL A 403
04
AC4
SOFTWARE
ARG A:108 , LEU A:129 , HIS A:132 , TRP A:300 , HOH A:584 , HOH A:664 , HOH A:734
BINDING SITE FOR RESIDUE GOL A 404
05
AC5
SOFTWARE
ASP A:73 , PHE A:74 , HIS A:78 , ARG A:204 , HIS A:232 , HOH A:784 , HOH A:797 , HOH A:809
BINDING SITE FOR RESIDUE GOL A 405
06
AC6
SOFTWARE
ASP A:49 , ASN A:52 , HOH A:610 , HOH A:677 , VAL B:33 , HOH B:743
BINDING SITE FOR RESIDUE GOL A 406
07
AC7
SOFTWARE
ASP A:198 , HOH A:593 , HOH A:769 , HOH A:804
BINDING SITE FOR RESIDUE GOL A 407
08
AC8
SOFTWARE
PHE A:289 , THR A:290 , PRO A:302 , LEU A:303 , ARG A:306 , HOH A:815
BINDING SITE FOR RESIDUE GOL A 408
09
AC9
SOFTWARE
ILE A:191 , ARG A:192 , ASP A:193 , GLY A:194 , MET A:195 , ARG A:196 , ASP A:271
BINDING SITE FOR RESIDUE EPE A 409
10
BC1
SOFTWARE
TYR A:54 , PHE A:246 , TYR B:15 , PRO B:17 , GLY B:18 , SER B:29 , ASN B:157 , ARG B:322 , ARG B:330 , PMP B:402 , HOH B:554
BINDING SITE FOR RESIDUE SIN B 401
11
BC2
SOFTWARE
TYR A:54 , GLY B:84 , SER B:85 , VAL B:86 , PHE B:110 , CYS B:153 , ASN B:157 , ASP B:184 , TYR B:187 , THR B:214 , SER B:216 , LYS B:217 , ARG B:225 , SIN B:401
BINDING SITE FOR RESIDUE PMP B 402
12
BC3
SOFTWARE
LYS A:241 , PRO A:245 , HOH A:545 , HOH A:562 , VAL B:14 , TYR B:15 , LEU B:112 , PRO B:115 , GLN B:116
BINDING SITE FOR RESIDUE GOL B 403
13
BC4
SOFTWARE
ARG B:108 , LEU B:129 , HIS B:132 , TRP B:300 , HOH B:596 , HOH B:798
BINDING SITE FOR RESIDUE GOL B 404
14
BC5
SOFTWARE
ASP B:73 , PHE B:74 , HIS B:78 , ARG B:204 , HIS B:232
BINDING SITE FOR RESIDUE GOL B 405
15
BC6
SOFTWARE
ASP B:73 , ASP B:198 , ARG B:204 , HOH B:631
BINDING SITE FOR RESIDUE GOL B 406
16
BC7
SOFTWARE
ALA B:286 , ALA B:287 , TYR C:137
BINDING SITE FOR RESIDUE GOL B 407
17
BC8
SOFTWARE
PHE B:289 , THR B:290 , PRO B:302 , LEU B:303 , ARG B:306 , ARG B:350
BINDING SITE FOR RESIDUE GOL B 408
18
BC9
SOFTWARE
ILE B:191 , ARG B:192 , ASP B:193 , GLY B:194 , MET B:195 , ARG B:196 , LEU B:267
BINDING SITE FOR RESIDUE EPE B 409
19
CC1
SOFTWARE
TYR C:15 , PRO C:17 , GLY C:18 , ALA C:28 , SER C:29 , ASN C:157 , ARG C:322 , ARG C:330 , PMP C:402 , HOH C:655 , TYR D:54 , PHE D:246
BINDING SITE FOR RESIDUE SIN C 401
20
CC2
SOFTWARE
GLY C:84 , SER C:85 , VAL C:86 , PHE C:110 , CYS C:153 , ASN C:157 , ASP C:184 , ALA C:186 , TYR C:187 , THR C:214 , SER C:216 , LYS C:217 , ARG C:225 , SIN C:401 , TYR D:54
BINDING SITE FOR RESIDUE PMP C 402
21
CC3
SOFTWARE
ASP C:73 , HIS C:78 , VAL C:203 , ARG C:204 , HIS C:232 , HOH C:688
BINDING SITE FOR RESIDUE GOL C 403
22
CC4
SOFTWARE
TYR C:15 , PRO C:115 , GLN C:116 , HOH C:563 , HOH C:564 , LYS D:241 , TYR D:243 , PRO D:245
BINDING SITE FOR RESIDUE GOL C 404
23
CC5
SOFTWARE
ARG C:108 , HIS C:132 , TRP C:300 , HOH C:533
BINDING SITE FOR RESIDUE GOL C 405
24
CC6
SOFTWARE
ASP B:340 , ARG B:344 , ARG B:347 , HOH B:502 , HOH B:738 , ASP C:166 , ARG C:170
BINDING SITE FOR RESIDUE GOL C 406
25
CC7
SOFTWARE
ILE C:191 , ARG C:192 , ASP C:193 , GLY C:194 , MET C:195 , ARG C:196 , ASP C:271 , HOH C:674
BINDING SITE FOR RESIDUE EPE C 407
26
CC8
SOFTWARE
TYR C:54 , PHE C:246 , TYR D:15 , PRO D:17 , GLY D:18 , SER D:29 , ASN D:157 , ARG D:322 , ARG D:330 , PMP D:402 , HOH D:552
BINDING SITE FOR RESIDUE SIN D 401
27
CC9
SOFTWARE
TYR C:54 , GLY D:84 , SER D:85 , VAL D:86 , PHE D:110 , CYS D:153 , ASN D:157 , ASP D:184 , ALA D:186 , TYR D:187 , THR D:214 , SER D:216 , LYS D:217 , ARG D:225 , SIN D:401
BINDING SITE FOR RESIDUE PMP D 402
28
DC1
SOFTWARE
LYS C:241 , PRO C:245 , HOH C:538 , TYR D:15 , LEU D:112 , PRO D:115 , GLN D:116 , HOH D:556
BINDING SITE FOR RESIDUE GOL D 403
29
DC2
SOFTWARE
TRP D:107 , ARG D:108 , HIS D:132 , TRP D:300 , HOH D:681 , HOH D:717 , HOH D:726 , HOH D:740
BINDING SITE FOR RESIDUE GOL D 404
30
DC3
SOFTWARE
ASP D:73 , PHE D:74 , HIS D:78 , VAL D:203 , ARG D:204 , HIS D:232 , HOH D:782
BINDING SITE FOR RESIDUE GOL D 405
31
DC4
SOFTWARE
GLU A:337 , HOH A:775 , PHE D:34 , ARG D:269 , HOH D:586 , HOH D:615
BINDING SITE FOR RESIDUE GOL D 406
32
DC5
SOFTWARE
ILE D:191 , ARG D:192 , ASP D:193 , GLY D:194 , MET D:195 , ARG D:196 , LEU D:267 , ASP D:271 , HOH D:746
BINDING SITE FOR RESIDUE EPE D 407
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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Sorry, no Info available
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PROSITE Patterns/Profiles
(0, 0)
Info
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;
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End label:
Sorry, no Info available
[
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Exons
(0, 0)
Info
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(0, 0)
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Sorry, no Info available
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CATH Domains
(0, 0)
Info
all CATH domains
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Sorry, no Info available
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Pfam Domains
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Info
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Sorry, no Info available
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