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4R3W
Asym. Unit
Info
Asym.Unit (121 KB)
Biol.Unit 1 (115 KB)
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(1)
Title
:
CRYSTAL STRUCTURE ANALYSIS OF THE 1,2,3-TRICARBOXYLATE BENZOIC ACID BOUND TO SP-ASADH-2'5'-ADP COMPLEX
Authors
:
A. G. Pavlovsky, R. E. Viola
Date
:
18 Aug 14 (Deposition) - 10 Dec 14 (Release) - 31 Dec 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.91
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Dehydrogenase, Nicotineamid-Dinucleotide, Oxidoreductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. G. Pavlovsky, B. Thangavelu, P. Bhansali, R. E. Viola
A Cautionary Tale Of Structure-Guided Inhibitor Development Against An Essential Enzyme In The Aspartate-Biosynthetic Pathway.
Acta Crystallogr. , Sect. D V. 70 3244 2014
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Hetero Components
(5, 14)
Info
All Hetero Components
1a: BENZENE-1,2,3-TRICARBOXYLIC ACID (3GQa)
2a: ADENOSINE-2'-5'-DIPHOSPHATE (A2Pa)
2b: ADENOSINE-2'-5'-DIPHOSPHATE (A2Pb)
3a: ACETATE ION (ACTa)
4a: 1,2-ETHANEDIOL (EDOa)
4b: 1,2-ETHANEDIOL (EDOb)
4c: 1,2-ETHANEDIOL (EDOc)
4d: 1,2-ETHANEDIOL (EDOd)
4e: 1,2-ETHANEDIOL (EDOe)
4f: 1,2-ETHANEDIOL (EDOf)
4g: 1,2-ETHANEDIOL (EDOg)
5a: SODIUM ION (NAa)
5b: SODIUM ION (NAb)
5c: SODIUM ION (NAc)
View:
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Label:
No.
Name
Count
Type
Full Name
1
3GQ
1
Ligand/Ion
BENZENE-1,2,3-TRICARBOXYLIC ACID
2
A2P
2
Ligand/Ion
ADENOSINE-2'-5'-DIPHOSPHATE
3
ACT
1
Ligand/Ion
ACETATE ION
4
EDO
7
Ligand/Ion
1,2-ETHANEDIOL
5
NA
3
Ligand/Ion
SODIUM ION
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Sites
(14, 14)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ILE A:273 , ALA A:274 , PHE A:276 , ALA A:279 , GLU B:343 , HOH B:569
BINDING SITE FOR RESIDUE NA A 401
02
AC2
SOFTWARE
GLY A:73 , SER A:74 , THR A:95 , SER A:96 , ARG A:99 , ASN A:127 , GLY A:159 , LYS A:223
BINDING SITE FOR RESIDUE 3GQ A 402
03
AC3
SOFTWARE
GLU A:24 , SER A:25 , TRP A:332 , GLU A:339 , HOH A:503 , EDO B:404
BINDING SITE FOR RESIDUE EDO A 403
04
AC4
SOFTWARE
SER A:250 , GLY A:298 , ASP A:324 , LEU A:326 , LEU A:327
BINDING SITE FOR RESIDUE EDO A 404
05
AC5
SOFTWARE
ASN A:127 , CYS A:128 , GLN A:155 , GLY A:159 , GLU A:220 , ARG A:245 , HIS A:252
BINDING SITE FOR RESIDUE ACT A 405
06
AC6
SOFTWARE
GLY A:9 , THR A:11 , GLY A:12 , ALA A:13 , ALA A:36 , SER A:37 , ARG A:39 , SER A:40 , THR A:57 , ALA A:72 , THR A:76 , GLY A:161 , MET A:162 , HOH A:580 , HOH A:583 , HOH A:595
BINDING SITE FOR RESIDUE A2P A 406
07
AC7
SOFTWARE
GLU A:343 , ILE B:273 , ALA B:274 , PHE B:276 , ALA B:279 , HOH B:573
BINDING SITE FOR RESIDUE NA B 401
08
AC8
SOFTWARE
ASP B:147 , SER B:236 , HOH B:574
BINDING SITE FOR RESIDUE NA B 402
09
AC9
SOFTWARE
LEU A:311 , ASP A:312 , THR B:225 , LYS B:229
BINDING SITE FOR RESIDUE EDO B 403
10
BC1
SOFTWARE
EDO A:403 , GLU B:24 , SER B:25 , TRP B:332 , GLU B:339 , HOH B:533
BINDING SITE FOR RESIDUE EDO B 404
11
BC2
SOFTWARE
SER B:250 , GLY B:298 , ASP B:324 , LEU B:326
BINDING SITE FOR RESIDUE EDO B 405
12
BC3
SOFTWARE
GLU B:282 , PRO B:291 , GLN B:292 , ASN B:295 , ALA B:296 , PHE B:303
BINDING SITE FOR RESIDUE EDO B 406
13
BC4
SOFTWARE
LYS A:229 , LEU B:311 , ASP B:312 , HOH B:523
BINDING SITE FOR RESIDUE EDO B 407
14
BC5
SOFTWARE
GLY B:9 , THR B:11 , GLY B:12 , ALA B:13 , ALA B:36 , SER B:37 , SER B:40 , THR B:57 , ALA B:72 , THR B:76 , GLY B:161 , MET B:162 , HOH B:567
BINDING SITE FOR RESIDUE A2P B 408
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SAPs(SNPs)/Variants
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Exons
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SCOP Domains
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CATH Domains
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (121 KB)
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