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4QI3
Biol. Unit 3
Info
Asym.Unit (154 KB)
Biol.Unit 1 (75 KB)
Biol.Unit 2 (75 KB)
Biol.Unit 3 (147 KB)
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(1)
Title
:
CYTOCHOME DOMAIN OF MYRICOCCUM THERMOPHILUM CELLOBIOSE DEHYDROGENASE, MTCYT
Authors
:
T. C. Tan, R. Gandini, C. Sygmund, R. Kittl, D. Haltrich, R. Ludwig, B. M. C. Divne
Date
:
30 May 14 (Deposition) - 15 Jul 15 (Release) - 15 Jul 15 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.40
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: A,B (1x)
Keywords
:
Immunoglobulin-Like Beta-Sandwich, Electron Transfer, Cdh Dehydrogenase Domain, Lpmo, Oxidoreductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
T. C. Tan, R. Gandini, C. Sygmund, R. Kittl, D. Haltrich, R. Ludwig, B. M. Hallberg, C. Divne
Fungal Enzyme
To Be Published
[
close entry info
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Hetero Components
(4, 14)
Info
All Hetero Components
1a: PROTOPORPHYRIN IX CONTAINING FE (HEMa)
1b: PROTOPORPHYRIN IX CONTAINING FE (HEMb)
2a: ALPHA-D-MANNOSE (MANa)
2b: ALPHA-D-MANNOSE (MANb)
2c: ALPHA-D-MANNOSE (MANc)
2d: ALPHA-D-MANNOSE (MANd)
2e: ALPHA-D-MANNOSE (MANe)
2f: ALPHA-D-MANNOSE (MANf)
2g: ALPHA-D-MANNOSE (MANg)
2h: ALPHA-D-MANNOSE (MANh)
3a: MAGNESIUM ION (MGa)
3b: MAGNESIUM ION (MGb)
3c: MAGNESIUM ION (MGc)
4a: N-ACETYL-D-GLUCOSAMINE (NAGa)
4b: N-ACETYL-D-GLUCOSAMINE (NAGb)
5a: PYROGLUTAMIC ACID (PCAa)
5b: PYROGLUTAMIC ACID (PCAb)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
HEM
2
Ligand/Ion
PROTOPORPHYRIN IX CONTAINING FE
2
MAN
8
Ligand/Ion
ALPHA-D-MANNOSE
3
MG
-1
Ligand/Ion
MAGNESIUM ION
4
NAG
2
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
5
PCA
2
Mod. Amino Acid
PYROGLUTAMIC ACID
[
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Sites
(15, 15)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
GLY A:67 , PRO A:73 , MET A:74 , ILE A:80 , THR A:81 , TYR A:99 , MET A:101 , VAL A:156 , LEU A:173 , GLN A:175 , HIS A:176 , ILE A:182 , HOH A:1001 , HOH A:1002 , GLN B:174 , GLN B:186 , MG B:601 , HOH B:701
BINDING SITE FOR RESIDUE HEM A 401
02
AC2
SOFTWARE
LYS A:56 , SER A:117 , ASN A:119 , HIS A:122 , SER A:124 , PRO B:194 , MAN B:605
BINDING SITE FOR RESIDUE NAG A 402
03
AC3
SOFTWARE
SER A:195 , TRP A:199 , HOH A:1092 , HOH A:1132 , HOH A:1154 , ASP B:108 , HOH B:818
BINDING SITE FOR RESIDUE MAN A 403
04
AC4
SOFTWARE
PRO A:194 , THR A:197 , ASP A:198 , HOH A:1134
BINDING SITE FOR RESIDUE MAN A 404
05
AC5
SOFTWARE
THR A:204
BINDING SITE FOR RESIDUE MAN A 405
06
AC6
SOFTWARE
GLU A:110 , THR A:206 , HOH A:1087
BINDING SITE FOR RESIDUE MAN A 406
07
AC7
SOFTWARE
GLY A:149 , GLN A:186 , HOH A:1003 , HEM B:602 , HOH B:702 , HOH B:703
BINDING SITE FOR RESIDUE MG A 407
08
AC8
SOFTWARE
HEM A:401 , HOH A:1001 , HOH A:1002 , GLY B:149 , GLN B:186 , HOH B:701
BINDING SITE FOR RESIDUE MG B 601
09
AC9
SOFTWARE
GLN A:186 , MG A:407 , HOH A:1003 , GLY B:67 , PRO B:73 , MET B:74 , ILE B:80 , THR B:81 , TYR B:99 , MET B:101 , VAL B:156 , LEU B:173 , GLN B:174 , GLN B:175 , HIS B:176 , ILE B:182 , HOH B:702 , HOH B:703 , HOH B:809 , HOH B:858
BINDING SITE FOR RESIDUE HEM B 602
10
BC1
SOFTWARE
LYS B:56 , ASN B:119
BINDING SITE FOR RESIDUE NAG B 603
11
BC2
SOFTWARE
SER B:195 , ASP B:198
BINDING SITE FOR RESIDUE MAN B 604
12
BC3
SOFTWARE
PHE A:8 , TYR A:54 , LYS A:56 , NAG A:402 , THR B:197 , ASP B:198 , HOH B:834
BINDING SITE FOR RESIDUE MAN B 605
13
BC4
SOFTWARE
VAL B:114 , THR B:204
BINDING SITE FOR RESIDUE MAN B 606
14
BC5
SOFTWARE
GLU B:110 , THR B:112 , THR B:204 , THR B:206
BINDING SITE FOR RESIDUE MAN B 607
15
BC6
SOFTWARE
HOH B:737 , HOH B:770 , HOH B:796 , HOH B:818 , HOH B:864
BINDING SITE FOR RESIDUE MG B 608
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
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PROSITE Patterns/Profiles
(, 0)
Info
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;
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End label:
Sorry, no Info available
[
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Exons
(0, 0)
Info
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(0, 0)
Info
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Sorry, no Info available
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CATH Domains
(0, 0)
Info
all CATH domains
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Sorry, no Info available
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Sorry, no Info available
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Asymmetric Unit 1
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select chains 'A' and 'C'
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select all 'ALA' residues (Alanines) in chain 'A'
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select residue range 5 to 10 in all chains
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select residue range 5 to 10 in chain 'A'
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Show PDB file:
Asym.Unit (154 KB)
Header - Asym.Unit
Biol.Unit 1 (75 KB)
Header - Biol.Unit 1
Biol.Unit 2 (75 KB)
Header - Biol.Unit 2
Biol.Unit 3 (147 KB)
Header - Biol.Unit 3
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