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Asym. Unit
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Asym.Unit (169 KB)
Biol.Unit 1 (162 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE CATALYTIC CORE OF HUMAN DNA POLYMERASE ALPHA IN TERNARY COMPLEX WITH AN RNA-PRIMED DNA TEMPLATE AND DCTP
Authors
:
A. G. Baranovskiy, Y. Suwa, N. D. Babayeva, J. Gu, T. H. Tahirov
Date
:
12 May 14 (Deposition) - 26 Nov 14 (Release) - 26 Nov 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.20
Chains
:
Asym. Unit : A,B,C
Biol. Unit 1: A,B,C (1x)
Keywords
:
B-Family Dna Polymerase, Dna Replication, Transferase-Dna-Rna Complex
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. G. Baranovskiy, N. D. Babayeva, Y. Suwa, J. Gu, T. H. Tahirov
Crystal Structure Of Human Dna Polymerase Alpha Catalytic Core In Complex With Dna/Rna And Dcp
To Be Published
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Hetero Components
(6, 8)
Info
All Hetero Components
1a: PENTAETHYLENE GLYCOL (1PEa)
2a: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE (DCPa)
3a: 1,2-ETHANEDIOL (EDOa)
4a: POTASSIUM ION (Ka)
5a: MAGNESIUM ION (MGa)
6a: ZINC ION (ZNa)
6b: ZINC ION (ZNb)
6c: ZINC ION (ZNc)
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No.
Name
Count
Type
Full Name
1
1PE
1
Ligand/Ion
PENTAETHYLENE GLYCOL
2
DCP
1
Ligand/Ion
2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE
3
EDO
1
Ligand/Ion
1,2-ETHANEDIOL
4
K
1
Ligand/Ion
POTASSIUM ION
5
MG
1
Ligand/Ion
MAGNESIUM ION
6
ZN
3
Ligand/Ion
ZINC ION
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Sites
(8, 8)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
8: AC8 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ASP A:860 , PHE A:861 , ASN A:862 , SER A:863 , LEU A:864 , TYR A:865 , ARG A:922 , LYS A:950 , ASP A:1004 , MG A:1302 , ZN A:1303 , HOH A:1430 , HOH A:1446 , HOH A:1448 , HOH A:1470 , HOH A:1475 , HOH A:1597 , HOH A:1601 , DC B:11 , DG C:110 , DG C:111
BINDING SITE FOR RESIDUE DCP A 1301
2
AC2
SOFTWARE
ASP A:860 , PHE A:861 , ASP A:1004 , DCP A:1301 , ZN A:1303
BINDING SITE FOR RESIDUE MG A 1302
3
AC3
SOFTWARE
ASP A:860 , ASP A:1004 , DCP A:1301 , MG A:1302 , HOH A:1516 , HOH A:1601
BINDING SITE FOR RESIDUE ZN A 1303
4
AC4
SOFTWARE
HIS A:342 , GLU A:500
BINDING SITE FOR RESIDUE ZN A 1304
5
AC5
SOFTWARE
CYS A:1224 , GLU A:1225 , ILE A:1227 , ILE A:1230 , HOH A:1510
BINDING SITE FOR RESIDUE K A 1305
6
AC6
SOFTWARE
VAL A:340 , PHE A:341 , PRO A:504 , ALA A:516 , GLU A:517 , HOH A:1602 , HOH A:1623 , HOH A:1627 , HOH A:1653
BINDING SITE FOR RESIDUE 1PE A 1306
7
AC7
SOFTWARE
LYS A:437 , TYR A:797 , TYR A:801 , ILE A:802 , VAL A:803 , HOH A:1512
BINDING SITE FOR RESIDUE EDO A 1307
8
AC8
SOFTWARE
G B:6 , HOH B:610 , HOH B:615
BINDING SITE FOR RESIDUE ZN B 501
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SAPs(SNPs)/Variants
(0, 0)
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Exons
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SCOP Domains
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CATH Domains
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (169 KB)
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